Contig 008304:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017O05Sequence541008304 (6)ref|XP_011093147.1|3e-75PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]643008304 (6)ref|XP_011093147.1|9e-75PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]
JMFF018K15Sequence597008304 (6)ref|XP_011093147.1|3e-75PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]749008304 (6)ref|XP_011093147.1|2e-74PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]
JMFF041G05Sequence650008304 (6)ref|XP_011093147.1|4e-75PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]560008304 (6)ref|XP_011093147.1|5e-48PREDICTED: actin-depolymerizing factor 10-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF041G05-                              ACTTTGCATTTTCGATCATTTCATCCAACAAGCTAAGCCAA
JMFF018K15-                              ACTTTGCATTTTCGATCATTTCATCCAACAAGCTAAGCCAA
rJMFF018K15+                         ATCTACTTTGCATTTTCGATCATTTCATCCAACAAGCTAAGCCAA
                      ____________________________________________________________
consensus                            ATCTACTTTGCATTTTCGATCATTTCATCCAACAAGCTAAGCCAA
 
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rJMFF017O05+                  ACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
JMFF041G05-           GGCTCCTCACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
JMFF018K15-           GGCTCCTCACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
JMFF017O05-                   ACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
rJMFF018K15+          GGCTCCTCACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
                      ____________________________________________________________
consensus             GGCTCCTCACCTTCACAGCATCACGAAATGGCAAATTCTGCATCTGGTGTGGGTGTGGTT
 
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rJMFF017O05+          GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
JMFF041G05-           GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
JMFF018K15-           GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
JMFF017O05-           GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
rJMFF018K15+          GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
                      ____________________________________________________________
consensus             GATGAATGCAAGCTGAAATTCATGGAGTTGAAGGCAAAGAGGTGCTTCAGGTACATTGTG
 
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rJMFF017O05+          TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
JMFF041G05-           TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
JMFF018K15-           TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
JMFF017O05-           TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
rJMFF018K15+          TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
rJMFF041G05+                                                  AAATGGGCAATCAGCAGGAG
                      ____________________________________________________________
consensus             TTCAAGATTGACGAGGAGACCCAGGTGGTGGTTGTAGAGAAAATGGGCAATCAGCAGGAG
 
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rJMFF017O05+          ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
JMFF041G05-           ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
JMFF018K15-           ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
JMFF017O05-           ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
rJMFF018K15+          ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
rJMFF041G05+          ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
                      ____________________________________________________________
consensus             ACTCATGTGGATTTCACCAAAAGCTTGCCTGCAGATGAGTGTCGATATGCTGTTTTCGAC
 
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rJMFF017O05+          TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
JMFF041G05-           TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
JMFF018K15-           TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
JMFF017O05-           TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
rJMFF018K15+          TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
rJMFF041G05+          TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
                      ____________________________________________________________
consensus             TACGATTTCACCACTGATGAGAACTGTCAAAGGAGCAAGATCTTCTTCATTGCGTGGTCT
 
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rJMFF017O05+          CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
JMFF041G05-           CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
JMFF018K15-           CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
JMFF017O05-           CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
rJMFF018K15+          CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
rJMFF041G05+          CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
                      ____________________________________________________________
consensus             CCCGAAACAGCAAAGATAAGGAGCAAGATGGTGTATGCAAGCTCAAAAGACAGATTCAGG
 
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rJMFF017O05+          AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
JMFF041G05-           AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
JMFF018K15-           AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
JMFF017O05-           AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
rJMFF018K15+          AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
rJMFF041G05+          AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
                      ____________________________________________________________
consensus             AGGGAGTTAGATGGGGTGCAGGTGGAGCTGCAAGCAACTGATGCTAGTGAGATGAGCTTG
 
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rJMFF017O05+          GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
JMFF041G05-           GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
JMFF018K15-           GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
JMFF017O05-           GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
rJMFF018K15+          GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
rJMFF041G05+          GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
                      ____________________________________________________________
consensus             GACATCTTCAGAGACAGAGCTCACTAAGCTAGACACTCTCATCTCCCACAATATTTCTTA
 
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rJMFF017O05+          GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
JMFF041G05-           GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
JMFF018K15-           GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
JMFF017O05-           GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
rJMFF018K15+          GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
rJMFF041G05+          GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
                      ____________________________________________________________
consensus             GTACCTACTGGTAGTCTGGTACTATACTACTGCTGCTGCTGCTACTATAATTTTTTACTT
 
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rJMFF017O05+          TTACTGCAATTTAGGCTTTCAGTTTAACTTATTCATAAGAGCCTCAATTGGGCTACTATG
JMFF041G05-           TTACTGNCATTTANGCTTTCAGTTTAACTTATTCATAAGAGCCTCAATTGGGCTACTATG
JMFF018K15-           TTACTGCNATTT                                                
JMFF017O05-           TTACTGCAA                                                   
rJMFF018K15+          TTACTGCAATTTAGGCTTTCAGTTTAACTTATTCATAAGAGCCTCAATTGGGCTACTATG
rJMFF041G05+          TTACTGCAATTTAGGCTTTCAGTTTAACTTATTCATAAGAGCCTCAATTGGGCTACTATG
                      ____________________________________________________________
consensus             TTACTGCAATTTAGGCTTTCAGTTTAACTTATTCATAAGAGCCTCAATTGGGCTACTATG
 
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rJMFF017O05+          GCTGACTGTTGAGGGTTTTGTTACCACAAGCATCAACTTGTTATAGACTAC         
JMFF041G05-           GCTGACTGT                                                   
rJMFF018K15+          GCTGACTGTTGAGGGTTTTGTTACCACAAGCATCAACTTGTTATAGACTACTTGTCTTTA
rJMFF041G05+          GCTGACTGTTGAGGGTTTTGTTACCACAAGCATCAACTTGTTATAGACTACTTGTCTTTA
                      ____________________________________________________________
consensus             GCTGACTGTTGAGGGTTTTGTTACCACAAGCATCAACTTGTTATAGACTACTTGTCTTTA
 
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rJMFF018K15+          ATTATTTCTTCCAAACCTTTTCTATGTTTCATTCAATACACTAC                
rJMFF041G05+          ATTATTTCTTCCAAACCTTTTCTATGTTTCATTCAATACACTACTTTACATTGAACAGCT
                      ____________________________________________________________
consensus             ATTATTTCTTCCAAACCTTTTCTATGTTTCATTCAATACACTACTTTACATTGAACAGCT