Contig 008302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013L05Sequence572010677 (23)ref|XP_002518432.1|2e-65conserved hypothetical protein [Ricinus communis] gb|EEF43819.1| conserved hypot772008302 (11)gb|ABK96436.1|3e-73unknown [Populus trichocarpa x Populus deltoides]
JMFF024L01Sequence435010677 (23)emb|CDP04437.1|6e-36unnamed protein product [Coffea canephora]726008302 (11)gb|ABK96436.1|6e-67unknown [Populus trichocarpa x Populus deltoides]
JMFF025E15Sequence531010677 (23)ref|XP_002518432.1|4e-65conserved hypothetical protein [Ricinus communis] gb|EEF43819.1| conserved hypot692008302 (11)gb|ABK96436.1|3e-71unknown [Populus trichocarpa x Populus deltoides]
JMFF033L17Sequence551010677 (23)ref|XP_002518432.1|6e-70conserved hypothetical protein [Ricinus communis] gb|EEF43819.1| conserved hypot693008302 (11)gb|ABK96436.1|8e-72unknown [Populus trichocarpa x Populus deltoides]
JMFF041D01Sequence647010677 (23)ref|XP_006348153.1|4e-86PREDICTED: uncharacterized protein RSN1-like isoform X1 [Solanum tuberosum]648008302 (11)ref|XP_006348154.1|3e-46PREDICTED: uncharacterized protein RSN1-like isoform X2 [Solanum tuberosum]
JMFF041P03Sequence647010677 (23)ref|XP_006348153.1|1e-83PREDICTED: uncharacterized protein RSN1-like isoform X1 [Solanum tuberosum]606008302 (11)ref|XP_006287117.1|5e-48hypothetical protein CARUB_v10000278mg [Capsella rubella] gb|EOA20015.1| hypothe
JMFF047K11Sequence540010677 (23)emb|CDP04437.1|1e-59unnamed protein product [Coffea canephora]504008302 (11)ref|XP_010422263.1|6e-13PREDICTED: LOW QUALITY PROTEIN: protein OSCA1-like [Camelina sativa]
JMFS032D08Sequence534008302 (11)ref|XP_010450765.1|2e-27PREDICTED: protein OSCA1-like [Camelina sativa]
JMSF017B06Sequence341010677 (23)ref|XP_002518432.1|6e-17conserved hypothetical protein [Ricinus communis] gb|EEF43819.1| conserved hypot739008302 (11)gb|ABK96436.1|3e-85unknown [Populus trichocarpa x Populus deltoides]
JMSF021E07Sequence685010677 (23)emb|CDP04437.1|8e-31unnamed protein product [Coffea canephora]789008302 (11)gb|ABK96436.1|2e-102unknown [Populus trichocarpa x Populus deltoides]
JMSF029G20Sequence682010677 (23)ref|XP_009613689.1|2e-98PREDICTED: calcium permeable stress-gated cation channel 1-like [Nicotiana tome744008302 (11)emb|CDP04437.1|1e-55unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021E07+ GCAATGGATGCTGGA
                      ____________________________________________________________
consensus GCAATGGATGCTGGA
 
. : . : . : . : . : . :
rJMSF021E07+ AGCATCGGTTTTAACACGGGCGAGCCACAAATCCAGTTGTACTTCTTGTTGGGCCTTGTC
rJMSF017B06+ TGTC
                      ____________________________________________________________
consensus AGCATCGGTTTTAACACGGGCGAGCCACAAATCCAGTTGTACTTCTTGTTGGGCCTTGTC
 
. : . : . : . : . : . :
rJMSF021E07+ TATGCTGTCGTCACACCAATTCTTATTCCTTTCATAATCGTGTTCTTTGGTTTCGCCTTC
rJMSF017B06+ TATGCNGTCGTCACGCCAATTCTTATTCCTTTCATAATCGTGTTCTTTGGTTTCGCCTTC
rJMFF013L05+ CCAATTCTTATTCCTTTCATAATCGTGTTCTTTGGTTTCGCCTTC
rJMFF024L01+ TTGGTTTCGCCTTC
rJMSF029G20+ CCTTC
                      ____________________________________________________________
consensus TATGCTGTCGTCACGCCAATTCTTATTCCTTTCATAATCGTGTTCTTTGGTTTCGCCTTC
 
. : . : . : . : . : . :
rJMSF021E07+ CTTGTATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMSF017B06+ CTTGTATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMFF033L17+ ATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMFF025E15+ ATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMFF013L05+ CTTGTATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMFF024L01+ CTTGTATATCGACATCAGATCATTTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
rJMSF029G20+ CTTGTATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCANC
                      ____________________________________________________________
consensus CTTGTATATCGACATCAGATCA-TTAACGTGTACAACCAAGAGTACGAAAGTGCTGCAGC
 
. : . : . : . : . : . :
rJMSF021E07+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMSF017B06+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMFF033L17+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMFF025E15+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMFF013L05+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMFF024L01+ GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
rJMFF041P03+ CGA
rJMSF029G20+ GTTCTGGNCCAGCGGTCCACGGGTGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
                      ____________________________________________________________
consensus GTTCTGG-CCAGCGGTCCACGGGCGCATAATATTTGCATTGGTCTTCTCTCAAATCTCGA
 
. : . : . : . : . : . :
rJMSF021E07+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMSF017B06+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMFF033L17+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMFF025E15+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMFF013L05+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMFF024L01+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMFF041P03+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
rJMSF029G20+ CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTTTTC
rJMFF041D01+ TGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
                      ____________________________________________________________
consensus CATTGGGATTGCTGAGCACGAAGCACGCTGCTACATCAGCGCCATTCCTGATCGCTCTTC
 
. : . : . : . : . : . :
rJMSF021E07+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMSF017B06+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMFF033L17+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMFF025E15+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMFF013L05+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMFF024L01+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMFF041P03+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
rJMSF029G20+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
JMFS032D08+ GAGCCAGCATTTACCA
rJMFF041D01+ CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
                      ____________________________________________________________
consensus CTGTACTAACCATCTCGTTTCATTTGTTCTGCAAAGGCCGATATGAGCCAGCATTTACCA
 
. : . : . : . : . : . :
rJMSF021E07+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMSF017B06+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF033L17+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF025E15+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF013L05+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF024L01+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF041P03+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMSF029G20+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF047K11+ CAGGAAGCAAAGATGAAAGATACTCT-GAAAGAGCAAGAGAGCCTACTC
JMFS032D08+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
rJMFF041D01+ AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
                      ____________________________________________________________
consensus AATATCCACTACAGGAAGCAAAGATGAAAGATACTCTGGAAAGAGCAAGAGAGCCTACTC
 
. : . : . : . : . : . :
rJMSF021E07+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMSF017B06+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF033L17+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF025E15+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF013L05+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF024L01+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF041P03+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMSF029G20+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF047K11+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGG-TTTCAAAGAAGGCGACG
JMFS032D08+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
rJMFF041D01+ TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
                      ____________________________________________________________
consensus TGAACCTGAAAGCCTACCTGCAAGATGCTTATGTGCACCCGGTTTTCAAAGAAGGCGACG
 
. : . : . : . : . : . :
rJMSF021E07+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMSF017B06+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF033L17+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF025E15+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF013L05+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF024L01+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF041P03+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMSF029G20+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF047K11+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
JMFS032D08+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
rJMFF041D01+ ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
                      ____________________________________________________________
consensus ATGATGAGGACGATGAGATGAGTGAAAAGCTGGAGATGGAGGGCATATTGGTCCCCACGA
 
. : . : . : . : . : . :
rJMSF021E07+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMSF017B06+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF033L17+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF025E15+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF013L05+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF024L01+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF041P03+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMSF029G20+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF047K11+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
JMFS032D08+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
rJMFF041D01+ AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
                      ____________________________________________________________
consensus AACGCCAGTCCCGGAGGAACACACCGGCTCCAAGCAAAGTCAGCGGCGGCTCCTCACCAG
 
. : . : . : . : . : . :
rJMSF021E07+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMSF017B06+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF033L17+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF025E15+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF013L05+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF024L01+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF041P03+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMSF029G20+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGANGAAAAT
rJMFF047K11+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
JMFS032D08+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
rJMFF041D01+ ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
                      ____________________________________________________________
consensus ACGTGATTTTGGAGAAAGAACCCTGATGGTTTACTAGTTCTTTAGGAGCTTGATGAAAAT
 
. : . : . : . : . : . :
rJMSF021E07+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMSF017B06+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF033L17+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF025E15+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF013L05+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF024L01+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF041P03+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMSF029G20+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF047K11+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
JMFS032D08+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
rJMFF041D01+ ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGGCTCCCATA
                      ____________________________________________________________
consensus ACAGTGTAAATTATCATCTGCCATGGCAGCTGAAAGCCACCTTTGTATAGGACTCCCATA
 
. : . : . : . : . : . :
rJMSF021E07+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGT
rJMSF017B06+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTC
rJMFF033L17+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF025E15+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF013L05+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF024L01+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF041P03+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMSF029G20+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF047K11+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
JMFS032D08+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
rJMFF041D01+ CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
                      ____________________________________________________________
consensus CCATATTCCATGAAGGGGCATTGGGAAATCTGTAGGTTAAGGCAAAATGTTGAGGTTCAG
 
. : . : . : . : . : . :
rJMFF033L17+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAA
rJMFF025E15+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAAT
rJMFF013L05+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATT
rJMFF024L01+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAG
rJMFF041P03+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
rJMSF029G20+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
rJMFF047K11+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
JMFS032D08+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
rJMFF041D01+ TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
                      ____________________________________________________________
consensus TGTGTTAGATATGTGTGGTGTTTTCAGGAGGAAGATTCAATTTGAAGTGTTAGATATTTC
 
. : . : . : . : . : . :
rJMFF041P03+ TGT
rJMSF029G20+ TGTAA
rJMFF047K11+ TGTAA
JMFS032D08+ TGTAA
rJMFF041D01+ TGTAATTTCATCTCTCTTATTCCTTCAGTCTAATGATTTGGTTCCAGAAAAAAAAAAAAA
                      ____________________________________________________________
consensus TGTAATTTCATCTCTCTTATTCCTTCAGTCTAATGATTTGGTTCCAGAAAAAAAAAAAAA