| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF040B01 | Sequence | 419 | 008299 (6) | ref|XP_009598644.1| | 7e-55 | PREDICTED: probable pyridoxal biosynthesis protein PDX1 [Nicotiana tomentosifor | 616 | 008299 (6) | emb|CDP09194.1| | 3e-82 | unnamed protein product [Coffea canephora] |
| JMSF034F22 | Sequence | 687 | 008299 (6) | gb|EYU45710.1| | 4e-128 | hypothetical protein MIMGU_mgv1a010525mg [Erythranthe guttata] | 653 | 008299 (6) | emb|CDP09194.1| | 4e-93 | unnamed protein product [Coffea canephora] |
| JMSF037L04 | Sequence | 664 | 008299 (6) | ref|XP_009598644.1| | 7e-123 | PREDICTED: probable pyridoxal biosynthesis protein PDX1 [Nicotiana tomentosifor | 692 | 008299 (6) | emb|CDP09194.1| | 1e-105 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF040B01- GCTACAG
____________________________________________________________
consensus GCTACAG
. : . : . : . : . : . :
JMFF040B01- GCCACAGCCACAGCCACAGCCACTCACGGATTCGGCTTCTCTGCGGCTGCATTTCTTCTT
JMSF037L04- CAGCCACAGCCACTCACGGATTCGGCTTCTCTGCGGCTGCATTTCTTCTT
JMSF034F22- CAGCCACAGCCACTCACGGATTCGGCTTCTCTGCGGCTGCATTTCTTCTT
____________________________________________________________
consensus GCCACAGCCACAGCCACAGCCACTCACGGATTCGGCTTCTCTGCGGCTGCATTTCTTCTT
. : . : . : . : . : . :
JMFF040B01- CTTCTTCTCATCTATACCTACGCGCTTCCGGCAATCGTTCACCGGAAATCAGAGCTAAAG
JMSF037L04- CTTCTTCTCATCTATACCTACGCGCTTCCGGCAATCGTTCACCGGAAATCAGAGCTAAAG
JMSF034F22- CTTCTTCTCATCTATACCTACGCGCTTCCGGCAATCGTTCACCGGAAATCAGAGCTAAAG
____________________________________________________________
consensus CTTCTTCTCATCTATACCTACGCGCTTCCGGCAATCGTTCACCGGAAATCAGAGCTAAAG
. : . : . : . : . : . :
JMFF040B01- ATGTCTGGGAGCGGTGTCGTTACACTCTATTCTAACGGCGCTATCGCCGAGACCACCAAG
JMSF037L04- ATGTCTGGGAGCGGTGTCGTTACACTCTATTCTAACGGCGCTATCGCCGAGACCACCAAG
JMSF034F22- ATGTCTGGGAGCGGTGTCGTTACACTCTATTCTAACGGCGCTATCGCCGAGACCACCAAG
____________________________________________________________
consensus ATGTCTGGGAGCGGTGTCGTTACACTCTATTCTAACGGCGCTATCGCCGAGACCACCAAG
. : . : . : . : . : . :
JMFF040B01- AAATCCCCCTTCTCCGTGAAGGTGGGGCTGGCACAAATGCTCCGTGGCGGCGTGATCATG
JMSF037L04- AAATCCCCCTTCTCCGTGAAGGTGGGGCTGGCACAAATGCTCCGTGGCGGCGTGATCATG
JMSF034F22- AAATCCCCCTTCTCCGTGAAGGTGGGGCTGGCACAAATGCTCCGTGGCGGCGTGATCATG
____________________________________________________________
consensus AAATCCCCCTTCTCCGTGAAGGTGGGGCTGGCACAAATGCTCCGTGGCGGCGTGATCATG
. : . : . : . : . : . :
JMFF040B01- GACGTCGTCAACGCGGAGCAGGCCCGTATTGCCGAGGAGGCCGGCGCGTGCGCCGTCATG
JMSF037L04- GACGTCGTCAACGCGGAGCAGGCCCGTATTGCCGAGGAGGCCGGCGCGTGCGCCGTCATG
JMSF034F22- GACGTCGTCAACGCGGAGCAGGCCCGTATTGCCGAGGAGGCCGGCGCGTGCGCCGTCATG
____________________________________________________________
consensus GACGTCGTCAACGCGGAGCAGGCCCGTATTGCCGAGGAGGCCGGCGCGTGCGCCGTCATG
. : . : . : . : . : . :
JMFF040B01- GCTCTGGAGCGCGTCCCCGCGGATATAAGAGCTCAGGGCGGCGTGGCCCGCATGTCCGAC
JMSF037L04- GCTCTGGAGCGCGTCCCCGCGGATATAAGAGCTCAGGGCGGCGTGGCCCGCATGTCCGAC
JMSF034F22- GCTCTGGAGCGCGTCCCCGCGGATATAAGAGCTCAGGGCGGCGTGGCCCGCATGTCCGAC
____________________________________________________________
consensus GCTCTGGAGCGCGTCCCCGCGGATATAAGAGCTCAGGGCGGCGTGGCCCGCATGTCCGAC
. : . : . : . : . : . :
JMFF040B01- CCTCAGCTGATTAAGGAGATCAAGCAGGCGGTGACTATTCCGGTGATGGCGA
JMSF037L04- CCTCAGCTGATTAAGGAGATCAAGCAGGCGGTGACTATTCCGGTGATGGCGAAGGCCCGG
JMSF034F22- CCTCAGCTGATTAAGGAGATCAAGCAGGCGGTGACTATTCCGGTGATGGCGAAGGCCCGG
____________________________________________________________
consensus CCTCAGCTGATTAAGGAGATCAAGCAGGCGGTGACTATTCCGGTGATGGCGAAGGCCCGG
. : . : . : . : . : . :
JMSF037L04- ATTGGGCATTTCGTGGAGGCGCAGATTCTCGAGGCTATTGGGATTGATTACGTGGATGAA
JMSF034F22- ATTGGGCATTTCGTGGAGGCGCAGATTCTCGAGGCTATTGGGATTGATTACGTGGATGAA
____________________________________________________________
consensus ATTGGGCATTTCGTGGAGGCGCAGATTCTCGAGGCTATTGGGATTGATTACGTGGATGAA
. : . : . : . : . : . :
JMSF037L04- TCGGAGGTCCTCACCCTCGCCGACGACGAGAACCATATCAACAAGCACAATTTCCGCATC
JMSF034F22- TCGGAGGTCCTCACCCTCGCCGACGACGAGAACCATATCAACAAGCACAATTTCCGCATC
rJMSF037L04+ ATCAACAAGCACAATTTCCGCATC
____________________________________________________________
consensus TCGGAGGTCCTCACCCTCGCCGACGACGAGAACCATATCAACAAGCACAATTTCCGCATC
. : . : . : . : . : . :
JMSF037L04- CCCTTCGTGTGCGGCTGCCGGAACCTGGGCGAAGCCCTCCGCCGCGTCCGGGAGGGGGCC
JMSF034F22- CCCTTCGTGTGCGGCTGCCGGAACCTGGGCGAAGCCCTCCGCCGCGTCCGGGAGGGGGCC
rJMSF037L04+ CCCTTCGTGTGCGGCTGCCGGAACCTGGGCGAAGCCCTCCGCCGCGTCCGGGAGGGGGCC
rJMSF034F22+ CTTCGTGTGCGGCTGCCGGAACCTGGGCGAAGCCNTCCGCCGCGTCCGGGAGGGGGCC
rJMFF040B01+ CGTCCGGGAGGGGGCC
____________________________________________________________
consensus CCCTTCGTGTGCGGCTGCCGGAACCTGGGCGAAGCCCTCCGCCGCGTCCGGGAGGGGGCC
. : . : . : . : . : . :
JMSF037L04- GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
JMSF034F22- GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
rJMSF037L04+ GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
rJMSF034F22+ GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
rJMFF040B01+ GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
____________________________________________________________
consensus GCGATGATCCGCACCAAGGGCGAGGCGGGCACCGGCAACATCATCGAGGCCGTCCGCCAC
. : . : . : . : . : . :
JMSF037L04- GTCCGCTCCGTG
JMSF034F22- GTCCGCTCCGTGATGGGCGACATCCGGGTCCTCCG
rJMSF037L04+ GTCCGCTCCGTGATGGGCGACATCCGGGTCCTCCGGAACATGGACGACGACGAGGTGTTC
rJMSF034F22+ GTCCGCTCCGTGATGGGCGACATCCGGGTCCTCCGGAACATGGACGACGACGAGGTGTTC
rJMFF040B01+ GTCCGCTCCGTGATGGGCGACATCCGGGTCCTCCGGAACATGGACGACGACGAGGTGTTC
____________________________________________________________
consensus GTCCGCTCCGTGATGGGCGACATCCGGGTCCTCCGGAACATGGACGACGACGAGGTGTTC
. : . : . : . : . : . :
rJMSF037L04+ ACCTTCGCCAAGAAGATTCAGGCCCCCTATGATCTCGTTATGCAGACCAAGCAGCTAGGC
rJMSF034F22+ ACCTTCGCCAAGAAGATTCAGGCCCCCTATGATCTCGTTATGCAGACCAAGCAGCTAGGC
rJMFF040B01+ ACCTTCGCCAAGAAGATTCAGGCCCCCTATGATCTCGTTATGCAGACCAAGCAGCTAGGC
____________________________________________________________
consensus ACCTTCGCCAAGAAGATTCAGGCCCCCTATGATCTCGTTATGCAGACCAAGCAGCTAGGC
. : . : . : . : . : . :
rJMSF037L04+ AGGCTTCCCGTGGTCCACTTCGCCGCTGGCGGGGTGGCGACCCCTGCCGATGCCGCGCTG
rJMSF034F22+ AGGCTTCCCGTGGTCCACTTCGCCGCTGGCGGGGTGGCGACCCCTGCCGATGCCGCGCTG
rJMFF040B01+ AGGCTTCCCGTGGTCCACTTCGCCGCTGGCGGGGTGGCGACCCCTGCCGATGCCGCGCTG
____________________________________________________________
consensus AGGCTTCCCGTGGTCCACTTCGCCGCTGGCGGGGTGGCGACCCCTGCCGATGCCGCGCTG
. : . : . : . : . : . :
rJMSF037L04+ ATGATGCAGCTCGGATGCGACGGCGTGTTCGTCGGCTCCGGCGTTTTCAAGAGCGGCGAT
rJMSF034F22+ ATGATGCAGCTCGGATGCGACGGCGTGTTCGTCGGCTCCGGCGTTTTCAAGAGCGGCGAT
rJMFF040B01+ ATGATGCAGCTCGGATGCGACGGCGTGTTCGTCGGCTCCGGCGTTTTCAAGAGCGGCGAT
____________________________________________________________
consensus ATGATGCAGCTCGGATGCGACGGCGTGTTCGTCGGCTCCGGCGTTTTCAAGAGCGGCGAT
. : . : . : . : . : . :
rJMSF037L04+ CCGGCCAGGAGGGCCCGCGCCATCGTGCAGGCGGTCACCCATTACAGTGATCCGGAGGTG
rJMSF034F22+ CCGGCCAGGAGGGCCCGCGCCATCGTGCAGGCGGTCACCCATTACAGTGATCCGGAGGTG
rJMFF040B01+ CCGGCCAGGAGGGCCCGCGCCATCGTGCAGGCGGTCACCCATTACAGTGATCCGGAGGTG
____________________________________________________________
consensus CCGGCCAGGAGGGCCCGCGCCATCGTGCAGGCGGTCACCCATTACAGTGATCCGGAGGTG
. : . : . : . : . : . :
rJMSF037L04+ TTGGCTGACATAAGCTGCGGACTGGGAGAAGCCATGGTTGGAATCAACCTCAATGATGAC
rJMSF034F22+ TTGGCTGACATAAGCTGCGGACTGGGAGAAGCCATGGTTGGAATCAACCTCAATGATGAC
rJMFF040B01+ TTGGCTGACATAAGCTGCGGACTGGGAGAAGCCATGGTTGGAATCAACCTCAATGATGAC
____________________________________________________________
consensus TTGGCTGACATAAGCTGCGGACTGGGAGAAGCCATGGTTGGAATCAACCTCAATGATGAC
. : . : . : . : . : . :
rJMSF037L04+ AAGGTGGAAAGGTATGCCAACCGCTCCGAGTGAGATAGGCTATGAAAGGTAGAAGTGTGA
rJMSF034F22+ AAGGTGGAAAGGTATGCCAACCGCTCCGAGTGAGATAGGCTATGAAAGGTAGAAGTGTGA
rJMFF040B01+ AAGGTGGAAAGGTATGCCAACCGCTCCGAGTGAGATAGGCTATGAAAGGTAGAAGTGTGA
____________________________________________________________
consensus AAGGTGGAAAGGTATGCCAACCGCTCCGAGTGAGATAGGCTATGAAAGGTAGAAGTGTGA
. : . : . : . : . : . :
rJMSF037L04+ TTATTGAGGTTTAAATGCAACCTCAGATTGTGCTTTGATGCACAAATTGTTGATCTTAAA
rJMSF034F22+ TTATTGAGGTTTAAATGCAACCTCAGATTGTGCTTTGATGCACAAATTGTTGATCTTAAA
rJMFF040B01+ TTATTGAGGTTTAAATGCAACCTCAGATTGTGCTTTGATGCACAAATTGTTGATCTTAAA
____________________________________________________________
consensus TTATTGAGGTTTAAATGCAACCTCAGATTGTGCTTTGATGCACAAATTGTTGATCTTAAA
. : . : . : . : . : . :
rJMSF037L04+ TGCCCTCCCTGTGTTTTGTTGATGAC
rJMSF034F22+ TGCCCTCCCTGTGTTTTGTTGATGAC
rJMFF040B01+ TGCCCTCCCTGTGTTTTGTTGATGACTGTTGTTTTAGCATTGAACACTTATGATTAGAAA
____________________________________________________________
consensus TGCCCTCCCTGTGTTTTGTTGATGACTGTTGTTTTAGCATTGAACACTTATGATTAGAAA