Contig 008292:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF038P05-                                                       ATCTCCTCATTCTGAA
                      ____________________________________________________________
consensus                                                         ATCTCCTCATTCTGAA
 
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JMFF038P05-           TCTTCTCGTTTCATTCCGCTTCTTATTTCCCTGTCTCGCGCCGTCGCGTCAATCCTCTTT
                      ____________________________________________________________
consensus             TCTTCTCGTTTCATTCCGCTTCTTATTTCCCTGTCTCGCGCCGTCGCGTCAATCCTCTTT
 
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JMFF038P05-           TCTCGACTCGATTCTGTAGATCGATTGCGAAATCATGGGTTTACGGATGTTATTGTGGCT
JMSF042H14-                                                       GGATGTTATTGTGGCT
                      ____________________________________________________________
consensus             TCTCGACTCGATTCTGTAGATCGATTGCGAAATCATGGGTTTACGGATGTTATTGTGGCT
 
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JMFF038P05-           GTCTTAGTTTGAAGTGTCTCTTCTAGAAACAACACCTCAACTGAGGATGTGGAACTTTGC
JMSF042H14-           GTCTTAGTTTGAAGTGTCTCTTCTAGAAACAACACCTCAACTGAGGATGTGGAACTTTGC
                      ____________________________________________________________
consensus             GTCTTAGTTTGAAGTGTCTCTTCTAGAAACAACACCTCAACTGAGGATGTGGAACTTTGC
 
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JMFF038P05-           ATCCAACTGTATAGCTGGTAGTGCAAGGCTGAAGAAGGACCTTCGGAAGCCTACTCAGGA
JMSF042H14-           ATCCAACTGTATAGCTGGTAGTGCAAGGCTGAAGAAGGACCTTCGGAAGCCTACTCAGGA
                      ____________________________________________________________
consensus             ATCCAACTGTATAGCTGGTAGTGCAAGGCTGAAGAAGGACCTTCGGAAGCCTACTCAGGA
 
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JMFF038P05-           TGCAGATTGCTCAGATGATGAAGCTTCTTCCATTACAAGTAGAGAGGAGGGACTGGAGTG
JMSF042H14-           TGCAGATTGCTCAGATGATGAAGCTTCTTCCATTACAAGTAGAGAGGAGGGACTGGAGTG
                      ____________________________________________________________
consensus             TGCAGATTGCTCAGATGATGAAGCTTCTTCCATTACAAGTAGAGAGGAGGGACTGGAGTG
 
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JMFF038P05-           CCCAATATGCTGGGAATCCTTCAACATCGTGGAAAATGTACCCTATGTTTTATGGTGTGG
JMSF042H14-           CCCAATATGCTGGGAATCCTTCAACATCGTGGAAAATGTACCCTATGTTTTATGGTGTGG
                      ____________________________________________________________
consensus             CCCAATATGCTGGGAATCCTTCAACATCGTGGAAAATGTACCCTATGTTTTATGGTGTGG
 
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JMFF038P05-           CCATACGCTTTGTAAAAATTGCATTTTGGGATTACAATGGGCCATTGTGAAGTGTCCTAC
JMSF042H14-           CCATACGCTTTGTAAAAATTGCATTTTGGGATTACAATGGGCCATTGTGAAGTGTCCTAC
                      ____________________________________________________________
consensus             CCATACGCTTTGTAAAAATTGCATTTTGGGATTACAATGGGCCATTGTGAAGTGTCCTAC
 
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JMFF038P05-           TTTACCAATCCAGCTTCCTCTCTTCATAGCATGTCCCTGGTGCAATTTATTATCCTTGCG
JMSF042H14-           TTTACCAATCCAGCTTCCTCTCTTCATAGCATGTCCCTGGTGCAATTTATTATCCTTGCG
                      ____________________________________________________________
consensus             TTTACCAATCCAGCTTCCTCTCTTCATAGCATGTCCCTGGTGCAATTTATTATCCTTGCG
 
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JMFF038P05-           TCTGGTTTATAGGGGAAACCTAAAGTTTCCTAGAAAGAACTTCTTTCTTCTATGGATGCT
JMSF042H14-           TCTGGTTTATAGGGGAAACCTAAAGTTTCCTAGAAAGAACTTCTTTCTTCTATGGATGCT
                      ____________________________________________________________
consensus             TCTGGTTTATAGGGGAAACCTAAAGTTTCCTAGAAAGAACTTCTTTCTTCTATGGATGCT
 
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JMFF038P05-           TGANAGCATGAATGG                                             
JMSF042H14-           TGAGAGCATGAATGGTGATAGGAGAGTGTCCCAGTCTGCCTCTTGTGCTGATCATCAACC
rJMSF042H14+                                                          TGATCATCAACC
rJMFF038P05+                                                          TGATCATCANCC
                      ____________________________________________________________
consensus             TGAGAGCATGAATGGTGATAGGAGAGTGTCCCAGTCTGCCTCTTGTGCTGATCATCAACC
 
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JMSF042H14-           ATCCTGGCAGCCATGTAGAACATTAGCAGGAAATTCTGCTACTGAGCCTAGTTTCCGGAG
rJMSF042H14+          ATCCTGGCAGCCATGTAGAACATTAGCAGGAAATTCTGCTACTGAGCCTAGTTTCCGGAG
rJMFF038P05+          ATCNTGGCAGCCATGTAGAACATTAGCAGGAAATTCTGCTACTGAGCCTAGTTTCCGGAG
                      ____________________________________________________________
consensus             ATCCTGGCAGCCATGTAGAACATTAGCAGGAAATTCTGCTACTGAGCCTAGTTTCCGGAG
 
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JMSF042H14-           GGGCCCATATGCTCGCCACCCAGAGTCATTAGGATCACATCATGATCATACTCATCTCAA
rJMSF042H14+          GGGCCCATATGCTCGCCACCCAGAGTCATTAGGATCACATCATGATCATACTCATCTCAA
rJMFF038P05+          GGGCCCATATGCTCGCCACCCAGAGTCATTAGGATCACATCATGATCATACTCATCTCAA
                      ____________________________________________________________
consensus             GGGCCCATATGCTCGCCACCCAGAGTCATTAGGATCACATCATGATCATACTCATCTCAA
 
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JMSF042H14-           TGGTTTCCTTGCTTTTGAGAGACTACATTCTTCACTTAGAAAGTCACTTGTTTTCTTCAT
rJMSF042H14+          TGGTTTCCTTGCTTTTGAGAGACTACATTCTTCACTTAGAAAGTCACTTGTTTTCTTCAT
rJMFF038P05+          TGGTTTCCTTGCTTTTGAGAGACTACATTCTTCACTTAGAAAGTCACTTGTTTTCTTCAT
                      ____________________________________________________________
consensus             TGGTTTCCTTGCTTTTGAGAGACTACATTCTTCACTTAGAAAGTCACTTGTTTTCTTCAT
 
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JMSF042H14-           TCATCTGACATCCAAGTTCCCCCTGGTGGTTATATTCCTTCTGATCCTCTTATATGCTAT
rJMSF042H14+          TCATCTGACATCCAAGTTCCCCCTGGTGGTTATATTCCTTCTGATCCTCTTATATGCTAT
rJMFF038P05+          TCATCTGACATCCAAGTTCCCCCTGGTGGTTATATTCCTTCTGATCCTCTTATATGCTAT
                      ____________________________________________________________
consensus             TCATCTGACATCCAAGTTCCCCCTGGTGGTTATATTCCTTCTGATCCTCTTATATGCTAT
 
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JMSF042H14-           ACCCGCCAGTGCAGCAATATTGGCCTTGTACATTCTTATCACCATTGTGTTTGCTCTTCC
rJMSF042H14+          ACCCGCCAGTGCAGCAATATTGGCCTTGTACATTCTTATCACCATTGTGTTTGCTCTTCC
rJMFF038P05+          ACCCGCCAGTGCAGCAATATTGGCCTTGTACATTCTTATCACCATTGTGTTTGCTCTTCC
                      ____________________________________________________________
consensus             ACCCGCCAGTGCAGCAATATTGGCCTTGTACATTCTTATCACCATTGTGTTTGCTCTTCC
 
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JMSF042H14-           ATCACTTCTCATTCTCTACTTTGCA                                   
rJMSF042H14+          ATCACTTCTCATTCTCTACTTTGCATATCCGAGTTTGGATTGGCTGGTCAGAGAAATCAT
rJMFF038P05+          ATCACTTCTCATTCTCTACTTTGCATATCCGAGTTTGGATTGGCTGGTCAGAGAAATCAT
                      ____________________________________________________________
consensus             ATCACTTCTCATTCTCTACTTTGCATATCCGAGTTTGGATTGGCTGGTCAGAGAAATCAT
 
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rJMSF042H14+          TACCTGAGATGATGGGGGATTTCAGGTTCTCACAAAGCAGCATTTCAGTTATAATCTGAT
rJMFF038P05+          TACCTGAGATGATGGGGGATTTCAGGTTCTCACAAAGCAGCATTTCAGTTATAATCTGAT
                      ____________________________________________________________
consensus             TACCTGAGATGATGGGGGATTTCAGGTTCTCACAAAGCAGCATTTCAGTTATAATCTGAT
 
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rJMSF042H14+          TTACTTGCTGCTATTTATCCCCCGAGAAACACCTTGTTGGCCATGAAAGCCATATACTTT
rJMFF038P05+          TTACTTGCTGCTATTTATCCCCCGAGAAACACCTTGTTGGCCATGAAAGCCATATACTTT
                      ____________________________________________________________
consensus             TTACTTGCTGCTATTTATCCCCCGAGAAACACCTTGTTGGCCATGAAAGCCATATACTTT
 
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rJMSF042H14+          TCAAATGTGTTCATGCCACAGAACGACAGAACTTTTACGTTATGGGTTTATTGTGATGCT
rJMFF038P05+          TCAAATGTGTTCATGCCACAGAACGACAGAACTTTTACGTTATGGGTTTATTGTGATGCT
                      ____________________________________________________________
consensus             TCAAATGTGTTCATGCCACAGAACGACAGAACTTTTACGTTATGGGTTTATTGTGATGCT
 
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rJMSF042H14+          TGTGATAGTATGATACTACTCATATATGCCATCTTTGCCGGTTATTGAAGCTGATGCTCC
rJMFF038P05+          TGTGATAGTATGATACTACTCATATATGCCATCTTTGCCGGTTATTGAAGCTGATGCTCC
                      ____________________________________________________________
consensus             TGTGATAGTATGATACTACTCATATATGCCATCTTTGCCGGTTATTGAAGCTGATGCTCC
 
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rJMSF042H14+          TGGCTTTTGCTTGTAATTTTGTCTGGAAATGGCAATTGATGTTCATTTAATACTCATTAA
rJMFF038P05+          TGGCTTTTGCTTGTAATTTTGTCTGGAAATGGCAATTGATGTTCATTTAATACTCATTAA
                      ____________________________________________________________
consensus             TGGCTTTTGCTTGTAATTTTGTCTGGAAATGGCAATTGATGTTCATTTAATACTCATTAA
 
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rJMSF042H14+          CTGTAATAACACTTATATATGCAGAATTGTCGAAACA                       
rJMFF038P05+          CTGTAATAACACTTATATATGCAGAATTGTCGAAACATTTCGAGTGAGTGTTAGTGATTA
                      ____________________________________________________________
consensus             CTGTAATAACACTTATATATGCAGAATTGTCGAAACATTTCGAGTGAGTGTTAGTGATTA
 
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rJMFF038P05+          TATTCAGTGTTCTTAGCTTTGGTCTATCAAGACAGTTCAAAACTGTTGATCATTTCTAAT
                      ____________________________________________________________
consensus             TATTCAGTGTTCTTAGCTTTGGTCTATCAAGACAGTTCAAAACTGTTGATCATTTCTAAT