Contig 008291:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045D01-                                        GGAACAGAACTTTCTTTCCTTTTATCTCTTC
                      ____________________________________________________________
consensus                                          GGAACAGAACTTTCTTTCCTTTTATCTCTTC
 
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JMSF045D01-           CTCTCTCTTGCCCTCTTGGCCCAAACCCCCAAACCATGTGATTGTGTACATTGAAATGCC
                      ____________________________________________________________
consensus             CTCTCTCTTGCCCTCTTGGCCCAAACCCCCAAACCATGTGATTGTGTACATTGAAATGCC
 
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JMSF045D01-           TATAAATCTCTGATTTCCTCTCTATAGCGTCTCTTTCGGCGCCCTAGAGCCTTCTTTTCT
                      ____________________________________________________________
consensus             TATAAATCTCTGATTTCCTCTCTATAGCGTCTCTTTCGGCGCCCTAGAGCCTTCTTTTCT
 
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JMSF045D01-           TTCCTGCTCTCTCTGTCTAAAATCTCATCTGCCATGGCTTCAGCTTCGCCCTCCCAAGCC
                      ____________________________________________________________
consensus             TTCCTGCTCTCTCTGTCTAAAATCTCATCTGCCATGGCTTCAGCTTCGCCCTCCCAAGCC
 
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JMSF045D01-           AGCCTTCTTCTCCAAAAACAACTTAGAGATCTCTGCAAAAACCCCGTTGATGGTTTCTCA
JMSF046O06-                    CTCCAGAAACAACTCAAAGATCTTTGCAAAAAGCCTGTTGATGGATTTTCA
                      ____________________________________________________________
consensus             AGCCTTCTTCTCCAGAAACAACTTAGAGATCTTTGCAAAAAGCCTGTTGATGGTTTTTCA
 
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JMSF045D01-           GCTGGCTTGGTGGACGAAAACAATCTTTTCGAATGGAGCGTAACGATTATTGGACCTCCT
JMSF046O06-           GCTGGTTTGGTTGATGAGAGCAATCTTTTCGAATGGAGCGTTACAGTTATTGGACCTCCT
                      ____________________________________________________________
consensus             GCTGGTTTGGTTGATGAGAGCAATCTTTTCGAATGGAGCGTTACGGTTATTGGACCTCCT
 
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JMSF045D01-           GATACTTTGTACGAAGGGGGCTTTTTCAATGCTATAATGAGTTTTCCTCAAAATTACCCA
JMSF046O06-           GATACATTATATGAAGGAGTTTTTTTTAATGCGATTATGAGTTTTCCTCAAAATTACCCG
rJMFF038O02+                                              ATGAGTTTTCCTCAAAATTACCCG
                      ____________________________________________________________
consensus             GATACTTTGTATGAAGGGGTTTTTTTTAATGCTATTATGAGTTTTCCTCAAAATTACCCG
 
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JMSF045D01-           AACAGTCCTCCTGCTATGAGATTTACCTCAGAGATCTGGCATCCTAATGTATACACCGAC
JMSF046O06-           AATAGTCCCCCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
rJMSF046O06+                                                      TAATGTATACACCGAT
rJMFF038O02+          AATAGTCCACCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
                      ____________________________________________________________
consensus             AATAGTCCTCCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
 
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JMSF045D01-           GGCAAGGTTTGCATTTCAATTCTTCATCCCCCTGGTGATGATCCAAATGGTTATGAGCTT
JMSF046O06-           GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
rJMSF046O06+          GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
rJMFF038O02+          GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
                      ____________________________________________________________
consensus             GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
 
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JMSF045D01-           GCTAGTGAGCGTTGGTCACCTGTCCATACGGT                            
JMSF046O06-           GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
rJMSF046O06+          GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
rJMFF038O02+          GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
                      ____________________________________________________________
consensus             GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
 
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JMSF046O06-           ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
rJMSF046O06+          ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
rJMFF038O02+          ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
                      ____________________________________________________________
consensus             ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
 
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JMSF046O06-           GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
rJMSF046O06+          GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
rJMFF038O02+          GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
                      ____________________________________________________________
consensus             GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
 
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JMSF046O06-           CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
rJMSF046O06+          CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
rJMFF038O02+          CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
                      ____________________________________________________________
consensus             CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
 
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JMSF046O06-           GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
rJMSF046O06+          GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
rJMFF038O02+          GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
                      ____________________________________________________________
consensus             GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
 
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JMSF046O06-           CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCT              
rJMSF046O06+          CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
rJMFF038O02+          CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
                      ____________________________________________________________
consensus             CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
 
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rJMSF046O06+          AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
rJMFF038O02+          AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
                      ____________________________________________________________
consensus             AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
 
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rJMSF046O06+          GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
rJMFF038O02+          GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
                      ____________________________________________________________
consensus             GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
 
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rJMSF046O06+          TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTC            
rJMFF038O02+          TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTCAAGGAACTGTTC
                      ____________________________________________________________
consensus             TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTCAAGGAACTGTTC
 
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rJMFF038O02+          ATTAAACAATGCCACCGGAATTTATGTTTGTTTTTCAACATAGTATTAATGCACCAAATA
                      ____________________________________________________________
consensus             ATTAAACAATGCCACCGGAATTTATGTTTGTTTTTCAACATAGTATTAATGCACCAAATA