Contig 008289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013O09Sequence371008289 (3)emb|CBI39860.3|2e-55unnamed protein product [Vitis vinifera]
JMFF029E04Sequence269010415 (4)ref|XP_006346074.1|75.1PREDICTED: uncharacterized protein LOC102592557 [Solanum tuberosum]641008289 (3)ref|XP_009783810.1|380PREDICTED: uncharacterized protein LOC104232337 [Nicotiana sylvestris]
JMFF038I04Sequence454010415 (4)ref|XP_006346074.1|184PREDICTED: uncharacterized protein LOC102592557 [Solanum tuberosum]734008289 (3)ref|XP_009783810.1|410PREDICTED: uncharacterized protein LOC104232337 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF038I04+                                                        GAAGAGTGAAGAAG
                      ____________________________________________________________
consensus                                                           GAAGAGTGAAGAAG
 
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rJMFF029E04+                                                   TCCAACAGACAACCAGGAT
rJMFF038I04+          AAGCAGCTTTTCTGCTAATCAGAATGGGTTTGGCCAGGAAATCCAACAGACAACCAGGAT
                      ____________________________________________________________
consensus             AAGCAGCTTTTCTGCTAATCAGAATGGGTTTGGCCAGGAAATCCAACAGACAACCAGGAT
 
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rJMFF029E04+          GTTGGATTCAGCTACATCCTATTACTCAGGTTTTCGCAAAGAGAAAAGATGGATTAGCAT
rJMFF038I04+          GTTGGATTCAGCTACATCCTATTACTCAGGTTTTCGCAAAGAGAAAAGATGGATTAGCAT
                      ____________________________________________________________
consensus             GTTGGATTCAGCTACATCCTATTACTCAGGTTTTCGCAAAGAGAAAAGATGGATTAGCAT
 
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rJMFF029E04+          TATCTGCAGCCAAAGCCACAGTNCAAGGAGTAAGAAGAATGGGGAATCCACACACAGATT
rJMFF038I04+          TATCTGCAGCCAAAGCCACAGTCCAAGGAGTAAGAAGAATGGGGAATCCACACACAGATT
                      ____________________________________________________________
consensus             TATCTGCAGCCAAAGCCACAGTCCAAGGAGTAAGAAGAATGGGGAATCCACACACAGATT
 
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rJMFF029E04+          CAGACCATTTCTGGGCTACTGCTTTCCTCGTATTCGGGTTCAAATCAGAACCCCCGAACG
rJMFF038I04+          CAGACCATTTCTGGGCTACTGCTTTCCTCGTATTCGGGTTCAAATCAGAACCCCCGAACG
                      ____________________________________________________________
consensus             CAGACCATTTCTGGGCTACTGCTTTCCTCGTATTCGGGTTCAAATCAGAACCCCCGAACG
 
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rJMFF029E04+          TCCAACTAAACGCCACCGAAATGCTTCTCTTCATCCGAAAAACAGCACTGCCATTAGCCA
rJMFF013O09+                                       TTCATCCGAAAAACAGCANTGCCATTAGCCA
rJMFF038I04+          TCCAACTAAACGCCACCGAAATGCTTCTCTTCATCCGAAAAACAGCACTGCCATTAGCCA
                      ____________________________________________________________
consensus             TCCAACTAAACGCCACCGAAATGCTTCTCTTCATCCGAAAAACAGCACTGCCATTAGCCA
 
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rJMFF029E04+          TCAATGCCTTCACAACCTTCTCGAGATGCAACTCGGCCTTGGAGCTCCTCAAAGTGTGCA
rJMFF013O09+          TCAATGCCTTCACAACNTTCTCGAGATGCAACTTGNCCTTGGAGCTCCTCAAAGTGTGCA
rJMFF038I04+          TCAATGCCTTCACAACCTTCTCGAGATGCAACTCGGCCTTGGAGCTCCTCAAAGTGTGCA
                      ____________________________________________________________
consensus             TCAATGCCTTCACAACCTTCTCGAGATGCAACTCGGCCTTGGAGCTCCTCAAAGTGTGCA
 
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rJMFF029E04+          CAAACGTGCTCGAAGAAGTGGAGAAGTCGTTCGTGTCACAGATACAGGATTGGCACCACG
rJMFF013O09+          CAAACGTGCTNGAAGAAGTGGAGAAGTCGTTCGTGTCACAGATACAGGATTGGCNCCACG
rJMFF038I04+          CAAACGTGCTCGAAGAAGTGGAGAAGTCGTTCGTGTCACAGATACAGGATTGGCACCACG
                      ____________________________________________________________
consensus             CAAACGTGCTCGAAGAAGTGGAGAAGTCGTTCGTGTCACAGATACAGGATTGGCACCACG
 
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rJMFF029E04+          CATCGCTCTGCTGGAAGAAGACGACGCTGCTGCAATCCAACCAGAGAGTGGACGAATACG
rJMFF013O09+          CATCGCTNTGCTGGAAGAAGANGACGCTGCTGCAATCCAACCAGAGAGTGGACGAATACG
rJMFF038I04+          CATCGCTCTGCTGGAAGAAGACGACGCTGCTGCAATCCAACCAGAGAGTGGACGAATACG
                      ____________________________________________________________
consensus             CATCGCTCTGCTGGAAGAAGACGACGCTGCTGCAATCCAACCAGAGAGTGGACGAATACG
 
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rJMFF029E04+          TGTGGCAAGAGGTGACACTGCTGAAAGCCACACTGCTCGAAACCAGAGCGAAGCTGCTGT
rJMFF013O09+          TGTGGCAAGAGGTGACANTGCTGAAAGCCACACTGCTNGAAANCAGAGNGAAGCTGCTGT
rJMFF038I04+          TGTGGCAAGAGGTGACACTGCTGAAAGCCACACTGCTCGAAACCAGAGCGAAGCTGCTGT
                      ____________________________________________________________
consensus             TGTGGCAAGAGGTGACACTGCTGAAAGCCACACTGCTCGAAACCAGAGCGAAGCTGCTGT
 
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rJMFF029E04+          TGAGAGGAGGCCATTTCGACAGCGGAGAGGAGCTCTGCAGAACCTGCATTAGTATCAGGA
rJMFF013O09+          TGAGANGAGGCCATTTCGACAGCGGAGAGGAGCTCTGCAGAACNTGCATTAGTATCAGGA
rJMFF038I04+          TGAGAGGAGGCCATTTCGACAGCGGAGAGGAGCTCTGCAGAACCTGCATTAGTATCAGGA
                      ____________________________________________________________
consensus             TGAGAGGAGGCCATTTCGACAGCGGAGAGGAGCTCTGCAGAACCTGCATTAGTATCAGGA
 
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rJMFF029E04+          CAGTGATGCTTGGCCACAACCATGCTCACACATTAGCTGCTCAACAAACACTGGCAAAAT
rJMFF013O09+          CAGNGATGCTTGGCCACAACCATGCTCACACATTAGC                       
rJMFF038I04+          CAGTGATGCTTGGCCACAACCATGCTCACACATTAGCTGCTCAACAAACACTGGCAAAAT
                      ____________________________________________________________
consensus             CAGTGATGCTTGGCCACAACCATGCTCACACATTAGCTGCTCAACAAACACTGGCAAAAT
 
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rJMFF029E04+          TAGTAAGAATGAGGAGTAAAAT                                      
rJMFF038I04+          TAGTAAGAATGAGGAGTAAAATATGATGTTTTTTTGTCAATTCTCTTTGAAGACAACTGA
                      ____________________________________________________________
consensus             TAGTAAGAATGAGGAGTAAAATATGATGTTTTTTTGTCAATTCTCTTTGAAGACAACTGA