Contig 008282:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D11Sequence614008282 (8)ref|XP_004249066.1|4e-100PREDICTED: uncharacterized protein At5g01610 [Solanum lycopersicum]744008282 (8)ref|XP_009631555.1|1e-104PREDICTED: uncharacterized protein At5g01610-like [Nicotiana tomentosiformis]
JMFF024P09Sequence740008282 (8)ref|XP_009631555.1|1e-104PREDICTED: uncharacterized protein At5g01610-like [Nicotiana tomentosiformis]
JMFF036O02Sequence562008282 (8)ref|XP_009774910.1|8e-76PREDICTED: uncharacterized protein At5g01610-like [Nicotiana sylvestris]749008282 (8)ref|XP_009631555.1|1e-104PREDICTED: uncharacterized protein At5g01610-like [Nicotiana tomentosiformis]
JMSF013H10Sequence558008282 (8)ref|XP_004249066.1|2e-87PREDICTED: uncharacterized protein At5g01610 [Solanum lycopersicum]725008282 (8)ref|XP_009631555.1|4e-104PREDICTED: uncharacterized protein At5g01610-like [Nicotiana tomentosiformis]
JMSF049G11Sequence652016892gb|ABD39695.1|7e-77fibrillin 8 [Coffea canephora]714008282 (8)ref|XP_009631555.1|9e-105PREDICTED: uncharacterized protein At5g01610-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF036O02-                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFF036O02-           ACTGTGGTCCCGTCGTGGCTTGCCGAAAAGTATCGGCTCGAGAAGAAGACCGACTGGTTT
JMSF013H10-                                                                  GGTTT
JMFF008D11-                                                                  GGTTT
                      ____________________________________________________________
consensus             ACTGTGGTCCCGTCGTGGCTTGCCGAAAAGTATCGGCTCGAGAAGAAGACCGACTGGTTT
 
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JMFF036O02-           ATCGCCCTTGCTCTAGACTCTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
JMSF013H10-           ATCGCCCTTGCTCTAGACTCTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
JMFF008D11-           ATCGCCCTTGATCTAGACTCTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
rJMSF049G11+               CCTTGCTCTAGACTCTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
rJMSF013H10+                             CTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
rJMFF024P09+                                        TCTGGATCAAATTAGGGCTCCGGGGAAGAG
rJMFF008D11+                                       GTCTGGATCAAATTAGGGCTCCGGGGAAGAG
rJMFF036O02+                                         CTGGATCAAATTAGGGCTCCGGGGAAGAG
                      ____________________________________________________________
consensus             ATCGCCCTTGCTCTAGACTCTAGTTCCCTGTCTGGATCAAATTAGGGCTCCGGGGAAGAG
 
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JMFF036O02-           ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
JMSF013H10-           ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
JMFF008D11-           ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
rJMSF049G11+          ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
rJMSF013H10+          ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
rJMFF024P09+          ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
rJMFF008D11+          ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
rJMFF036O02+          ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
                      ____________________________________________________________
consensus             ATCGAAGAATTATTGAAGATACGAAATCCATACTCTTACTGACGTCTGTATTTGAATAAT
 
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JMFF036O02-           TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
JMSF013H10-           TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
JMFF008D11-           TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
rJMSF049G11+          TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
rJMSF013H10+          TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
rJMFF024P09+          TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
rJMFF008D11+          TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
rJMFF036O02+          TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
                      ____________________________________________________________
consensus             TCAGGAATGGATCAGATATTGAACAAGGTGGGTTCATACTGGATTGGCAAGAGAGCGAAC
 
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JMFF036O02-           AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
JMSF013H10-           AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
JMFF008D11-           AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
rJMSF049G11+          AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
rJMSF013H10+          AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
rJMFF024P09+          AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
rJMFF008D11+          AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
rJMFF036O02+          AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
                      ____________________________________________________________
consensus             AAGGAGATCAATTCTGTCGGCGATGACATCAATTCACTGTCAACCAGTATTGAAGGAGGA
 
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JMFF036O02-           GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
JMSF013H10-           GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGGAACCGTTGACAGAACTGCTA
JMFF008D11-           GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
rJMSF049G11+          GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
rJMSF013H10+          GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGGAACCGTTGACAGAACTGCTA
rJMFF024P09+          GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
rJMFF008D11+          GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
rJMFF036O02+          GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
                      ____________________________________________________________
consensus             GCAAAATGGTTGGTTAACAAAATTAAAGGTAAGATGCAGAAACCGTTGACAGAACTGCTA
 
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JMFF036O02-           AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
JMSF013H10-           AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
JMFF008D11-           AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
rJMSF049G11+          AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
rJMSF013H10+          AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
rJMFF024P09+          AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
rJMFF008D11+          AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
rJMFF036O02+          AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
                      ____________________________________________________________
consensus             AAGGAGTATGATTTGCCTGTCGGTATTTTTCCTAGTGATGCCACGAATTACGAGTTTAAC
 
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JMFF036O02-           GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
JMSF013H10-           GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
JMFF008D11-           GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
rJMSF049G11+          GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
rJMSF013H10+          GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
rJMFF024P09+          GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
rJMFF008D11+          GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
rJMFF036O02+          GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
                      ____________________________________________________________
consensus             GAAGAGACGAGAAAGATCACTGTCTTCATACCATCCATTTGCGAAGTGGGTTACAAGGAT
 
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JMFF036O02-           TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
JMSF013H10-           TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
JMFF008D11-           TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
rJMSF049G11+          TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
rJMSF013H10+          TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
rJMFF024P09+          TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
rJMFF008D11+          TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
rJMFF036O02+          TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
                      ____________________________________________________________
consensus             TCATCTGTTTTGCGCTTTGCTACCACCGTGACTGGATATCTTGAGAAAGGAAAGCTAGCT
 
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JMFF036O02-           GACATTGAGGGAATGAAAACA                                       
JMSF013H10-           GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
JMFF008D11-           GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
rJMSF049G11+          GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
rJMSF013H10+          GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
rJMFF024P09+          GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
rJMFF008D11+          GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
rJMFF036O02+          GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
                      ____________________________________________________________
consensus             GACATTGAGGGAATGAAAACAAAGGTGATGATTTGGGTGAAAGTGACTGCCATTTCCTCT
 
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JMSF013H10-           GAAAAATCGAAGC                                               
JMFF008D11-           GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
rJMSF049G11+          GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
rJMSF013H10+          GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
rJMFF024P09+          GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
rJMFF008D11+          GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
rJMFF036O02+          GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
                      ____________________________________________________________
consensus             GAAAAATCGAAGCTCCACTTCTCGGCTGGGATGAAGAAAACCAGGAACAGAGATGCTTAT
 
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JMFF008D11-           GAGGTTATC                                                   
rJMSF049G11+          GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
rJMSF013H10+          GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
rJMFF024P09+          GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
rJMFF008D11+          GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
rJMFF036O02+          GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
                      ____________________________________________________________
consensus             GAGGTTATCAGAAGTGGAGTCAATGTGGATAAGTTTTAGAGTGGTCAAATGAATGTAATG
 
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rJMSF049G11+          CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATT 
rJMSF013H10+          CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATTT
rJMFF024P09+          CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATTT
rJMFF008D11+          CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATTT
rJMFF036O02+          CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATTT
                      ____________________________________________________________
consensus             CTGTTAGAGTGGGCAAATGAATATAATGCTGTAATGCCTTCGTAAGGGCTCTCACTATTT
 
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rJMSF013H10+          GTGCTACCTTGTCTATCTATGCTT                                    
rJMFF024P09+          GTGCTACCTTGTCTATCTATGCTTTATTTTCAACTCT                       
rJMFF008D11+          GTGCTACCTTGTCTATCTATGCTTTATTTTCAACTCT                       
rJMFF036O02+          GTGCTACCTTGTCTATCTATGCTTTATTTTCAACTCTTGAAATCACGATTTCAAATGATT
                      ____________________________________________________________
consensus             GTGCTACCTTGTCTATCTATGCTTTATTTTCAACTCTTGAAATCACGATTTCAAATGATT