Contig 008275:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003F07Sequence410008275 (2)ref|XP_004241314.1|2e-48PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]
JMFF035L05Sequence507000236 (4)ref|XP_009781717.1|7e-71PREDICTED: alcohol-forming fatty acyl-CoA reductase-like [Nicotiana sylvestris]702008275 (2)ref|XP_004241314.1|2e-106PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP003F07+ CGAGATAAAAGTATTTTATTGCTATGTCAGGAGA
                      ____________________________________________________________
consensus CGAGATAAAAGTATTTTATTGCTATGTCAGGAGA
 
. : . : . : . : . : . :
rJMCP003F07+ TATAACACATTAAAACGTCATTATTGATTTATTATTGCCACCCGAACAAAGTGATATTAA
                      ____________________________________________________________
consensus TATAACACATTAAAACGTCATTATTGATTTATTATTGCCACCCGAACAAAGTGATATTAA
 
. : . : . : . : . : . :
rJMCP003F07+ TTCTAACAATTAATCACTTGAAGACGTGTTTTACTAATCCAGGAAGGTGAGCTTTCATGA
rJMFF035L05- AATCACTAGAAGACGTGTTTCACTAATCCAGGAAAGTGAGCTTTCATGA
                      ____________________________________________________________
consensus TTCTAACAATTAATCACTTGAAGACGTGTTTTACTAATCCAGGAAGGTGAGCTTTCATGA
 
. : . : . : . : . : . :
rJMCP003F07+ AATAATCTTCCCAGCTGATTGCTTTTGGATCAAAATAGAACAAATCACTCTCAATGCACC
rJMFF035L05- AATAATCTTCCCAGCTAATTGCTTTAGGATCAAAATAGAATAATTCAGTTTCAATGCCTC
                      ____________________________________________________________
consensus AATAATCTTCCCAGCTGATTGCTTTTGGATCAAAATAGAATAATTCAGTTTCAATGCCTC
 
. : . : . : . : . : . :
rJMCP003F07+ CTTCTTTCGCAGCTCTCCTCAATTTTTCCGTGTTCATATCATCATATATTCCCTTGAAGA
rJMFF035L05- CTTCTTTTGCAGCTCTCCTCAATTTTTCTGTATTCATATCATCATATATTCCTTTGAAGA
                      ____________________________________________________________
consensus CTTCTTTTGCAGCTCTCCTCAATTTTTCTGTGTTCATATCATCATATATTCCTTTGAAGA
 
. : . : . : . : . : . :
rJMCP003F07+ ATAAGTAGGGTCGATATAGGTCCACCAGTTTCATCACAAATTTGATTTTTCTATCCATCT
rJMFF035L05- ATAAGTAGGGTCGATATAAATCCACCAGCTTCATCACAAATTTGATTTTCCTATTCATCT
                      ____________________________________________________________
consensus ATAAGTAGGGTCGATATAGGTCCACCAGTTTCATCACAAATTTGATTTTTCTATTCATCT
 
. : . : . : . : . : . :
rJMCP003F07+ CATTACACCTTCTCTGGAAATACTGACAACATACAGTGTTCAATATCTCCAATCCCTTCA
rJMFF035L05- CATCACACGTTCTCTGGAAATACTTACAACATATAGTGTTCAATATCTCCAACCCCTTCA
                      ____________________________________________________________
consensus CATTACACGTTCTCTGGAAATACTTACAACATATAGTGTTCAATATCTCCAATCCCTTCA
 
. : . : . : . : . : . :
rJMCP003F07+ AAGGGAGCAGATAA
rJMFF035L05- AAGGGAGCAGATAACGAATAGCCATGTATCTGTGGAAGCTATCCATGGTGCTTAACACAG
                      ____________________________________________________________
consensus AAGGGAGCAGATAACGAATAGCCATGTATCTGTGGAAGCTATCCATGGTGCTTAACACAG
 
. : . : . : . : . : . :
rJMFF035L05- TCACCTTTCCAACAACAACAGCTTTTCCATTCTTTCCTATCCATGGATGCTTGGTGAAGT
                      ____________________________________________________________
consensus TCACCTTTCCAACAACAACAGCTTTTCCATTCTTTCCTATCCATGGATGCTTGGTGAAGT
 
. : . : . : . : . : . :
rJMFF035L05- AATGGAGAGCATAATCTTGTAGCCAACTAAACTCCACTGGGTTGGATACCGAGGATCCAA
                      ____________________________________________________________
consensus AATGGAGAGCATAATCTTGTAGCCAACTAAACTCCACTGGGTTGGATACCGAGGATCCAA
 
. : . : . : . : . : . :
rJMFF035L05- CGTGGTATATGGTCTGAGTGCCACGTTGATCTGCATGTGCCACCATGGAAACTATCATGG
                      ____________________________________________________________
consensus CGTGGTATATGGTCTGAGTGCCACGTTGATCTGCATGTGCCACCATGGAAACTATCATGG
 
. : . : . : . : . : . :
rJMFF035L05- CATTCACCACCATATCAGCTGGGATCAAATCTGTAATGGTCTTTGGATCACCTAAGAAGC
                      ____________________________________________________________
consensus CATTCACCACCATATCAGCTGGGATCAAATCTGTAATGGTCTTTGGATCACCTAAGAAGC
 
. : . : . : . : . : . :
rJMFF035L05- ATGTTAGTCTTCCTTTAGCATAACCAAGTGCTAAGCTATCAATGGTTCTGACACCTTCGA
                      ____________________________________________________________
consensus ATGTTAGTCTTCCTTTAGCATAACCAAGTGCTAAGCTATCAATGGTTCTGACACCTTCGA