Contig 008275:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003F07Sequence410008275 (2)ref|XP_004241314.1|2e-48PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]
JMFF035L05Sequence507000236 (4)ref|XP_009781717.1|7e-71PREDICTED: alcohol-forming fatty acyl-CoA reductase-like [Nicotiana sylvestris]702008275 (2)ref|XP_004241314.1|2e-106PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMCP003F07+                                    CGAGATAAAAGTATTTTATTGCTATGTCAGGAGA
                      ____________________________________________________________
consensus                                       CGAGATAAAAGTATTTTATTGCTATGTCAGGAGA
 
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rJMCP003F07+          TATAACACATTAAAACGTCATTATTGATTTATTATTGCCACCCGAACAAAGTGATATTAA
                      ____________________________________________________________
consensus             TATAACACATTAAAACGTCATTATTGATTTATTATTGCCACCCGAACAAAGTGATATTAA
 
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rJMCP003F07+          TTCTAACAATTAATCACTTGAAGACGTGTTTTACTAATCCAGGAAGGTGAGCTTTCATGA
rJMFF035L05-                     AATCACTAGAAGACGTGTTTCACTAATCCAGGAAAGTGAGCTTTCATGA
                      ____________________________________________________________
consensus             TTCTAACAATTAATCACTTGAAGACGTGTTTTACTAATCCAGGAAGGTGAGCTTTCATGA
 
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rJMCP003F07+          AATAATCTTCCCAGCTGATTGCTTTTGGATCAAAATAGAACAAATCACTCTCAATGCACC
rJMFF035L05-          AATAATCTTCCCAGCTAATTGCTTTAGGATCAAAATAGAATAATTCAGTTTCAATGCCTC
                      ____________________________________________________________
consensus             AATAATCTTCCCAGCTGATTGCTTTTGGATCAAAATAGAATAATTCAGTTTCAATGCCTC
 
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rJMCP003F07+          CTTCTTTCGCAGCTCTCCTCAATTTTTCCGTGTTCATATCATCATATATTCCCTTGAAGA
rJMFF035L05-          CTTCTTTTGCAGCTCTCCTCAATTTTTCTGTATTCATATCATCATATATTCCTTTGAAGA
                      ____________________________________________________________
consensus             CTTCTTTTGCAGCTCTCCTCAATTTTTCTGTGTTCATATCATCATATATTCCTTTGAAGA
 
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rJMCP003F07+          ATAAGTAGGGTCGATATAGGTCCACCAGTTTCATCACAAATTTGATTTTTCTATCCATCT
rJMFF035L05-          ATAAGTAGGGTCGATATAAATCCACCAGCTTCATCACAAATTTGATTTTCCTATTCATCT
                      ____________________________________________________________
consensus             ATAAGTAGGGTCGATATAGGTCCACCAGTTTCATCACAAATTTGATTTTTCTATTCATCT
 
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rJMCP003F07+          CATTACACCTTCTCTGGAAATACTGACAACATACAGTGTTCAATATCTCCAATCCCTTCA
rJMFF035L05-          CATCACACGTTCTCTGGAAATACTTACAACATATAGTGTTCAATATCTCCAACCCCTTCA
                      ____________________________________________________________
consensus             CATTACACGTTCTCTGGAAATACTTACAACATATAGTGTTCAATATCTCCAATCCCTTCA
 
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rJMCP003F07+          AAGGGAGCAGATAA                                              
rJMFF035L05-          AAGGGAGCAGATAACGAATAGCCATGTATCTGTGGAAGCTATCCATGGTGCTTAACACAG
                      ____________________________________________________________
consensus             AAGGGAGCAGATAACGAATAGCCATGTATCTGTGGAAGCTATCCATGGTGCTTAACACAG
 
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rJMFF035L05-          TCACCTTTCCAACAACAACAGCTTTTCCATTCTTTCCTATCCATGGATGCTTGGTGAAGT
                      ____________________________________________________________
consensus             TCACCTTTCCAACAACAACAGCTTTTCCATTCTTTCCTATCCATGGATGCTTGGTGAAGT
 
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rJMFF035L05-          AATGGAGAGCATAATCTTGTAGCCAACTAAACTCCACTGGGTTGGATACCGAGGATCCAA
                      ____________________________________________________________
consensus             AATGGAGAGCATAATCTTGTAGCCAACTAAACTCCACTGGGTTGGATACCGAGGATCCAA
 
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rJMFF035L05-          CGTGGTATATGGTCTGAGTGCCACGTTGATCTGCATGTGCCACCATGGAAACTATCATGG
                      ____________________________________________________________
consensus             CGTGGTATATGGTCTGAGTGCCACGTTGATCTGCATGTGCCACCATGGAAACTATCATGG
 
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rJMFF035L05-          CATTCACCACCATATCAGCTGGGATCAAATCTGTAATGGTCTTTGGATCACCTAAGAAGC
                      ____________________________________________________________
consensus             CATTCACCACCATATCAGCTGGGATCAAATCTGTAATGGTCTTTGGATCACCTAAGAAGC
 
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rJMFF035L05-          ATGTTAGTCTTCCTTTAGCATAACCAAGTGCTAAGCTATCAATGGTTCTGACACCTTCGA
                      ____________________________________________________________
consensus             ATGTTAGTCTTCCTTTAGCATAACCAAGTGCTAAGCTATCAATGGTTCTGACACCTTCGA