Contig 008272:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E12Sequence541008272 (6)ref|XP_006357754.1|2e-10PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum tuberosum]
JMFF013E02Sequence439008272 (6)
JMFF035A05Sequence585003481 (2)ref|XP_009787658.1|7e-17PREDICTED: uncharacterized protein LOC104235570 isoform X2 [Nicotiana sylvestri575008272 (6)ref|XP_006357754.1|2e-12PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum tuberosum]
JMFS069F05Sequence624008272 (6)ref|XP_006357754.1|3e-36PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum tuberosum]
JMFS093G02Sequence611008272 (6)ref|XP_006357754.1|2e-36PREDICTED: uncharacterized protein LOC102587194 isoform X2 [Solanum tuberosum]
JMSF030O17Sequence163008272 (6)

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+                                                 GCCAGGCGATTAGCCGAGCGCA
JMFS069F05+                                                  CCAGGCGATTAGCCGAGCGCA
                      ____________________________________________________________
consensus                                                   GCCAGGCGATTAGCCGAGCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           ACGACTTCACCGGCGCGCACCACATGCTGTCCTCGGCTCGAGCCTTGCTGCTGCAGTCCA
JMFS069F05+           ACGACTTCACCGGCGCGCACCACATGCTGTCCTCGGCTCGAGCCTTGCTGCTGCAGTCCA
                      ____________________________________________________________
consensus             ACGACTTCACCGGCGCGCACCACATGCTGTCCTCGGCTCGAGCCTTGCTGCTGCAGTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           GCTCCGGCCACGCCGACGAGTTCATCGGCGGCTTGGAAGCCCAGCTCTCGGAGCTGCATT
JMFS069F05+           GCTCCGGCCACGCCGACGAGTTCATCGGCGGCTTGGAAGCCCAGCTCTCGGAGCTGCATT
rJMFF001E12+                                    GGCGGCTTGGAAGCCCAGCTNTNGGAGCTNCNTT
rJMFF035A05+                                    GGCGGCTTGGAAGCCCAGCTTTCGGAGCTGCATT
                      ____________________________________________________________
consensus             GCTCCGGCCACGCCGACGAGTTCATCGGCGGCTTGGAAGCCCAGCTCTCGGAGCTGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           GGAGAAGGCAAAACCACCAACCTCAGCAGATCCAACGCCGCAGAACCAGCGGAGAAAGAG
JMFS069F05+           GGAGAAGGCAAAACCACCAACCTCAGCAGATCCAACGCCGCAGAACCAGCGGAGAAAGAG
rJMFF001E12+          GGNGAAGGCAAAACCCCCAACCTCAGCAGATCCAACNCCGCAGAACCAGCGGNGAAAGNG
rJMFF035A05+          GGNGAAGGCAAAACCCCCAACCTCAGCAGATCCAACNCCGCAGAACCAGCGGNGAAAGNG
                      ____________________________________________________________
consensus             GGAGAAGGCAAAACCCCCAACCTCAGCAGATCCAACGCCGCAGAACCAGCGGAGAAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           AGGACGAGAAAGCCGAGCCTCTCACGCCAACATCGGCTTGGAGAGCCGCTGAAATGCTAG
JMFS069F05+           AGGACGAGAAAGCCGAGCCTCTCACGCCAACATCGGCTTGGAGAGCCGCTGAAATGCTAG
rJMFF001E12+          NGGNCGNGAAAGCCGATCCTNTCNCGCCAACATCGGCTTGGAGAGCCGCTGAAATGCTAG
rJMFF013E02+                 GAAAGCCGAGCCTTTCACGCCAACATCGGCTTGGNGAGCCGCTGAAATGCTAG
rJMFF035A05+          AGGNCGAGAAAGCCGATCCTTTCACGCCAACATNGGCTTGGNGAGCCGCTGAAATGCTAG
                      ____________________________________________________________
consensus             AGGACGAGAAAGCCGAGCCTTTCACGCCAACATCGGCTTGGAGAGCCGCTGAAATGCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           CTAAAGTGGCTATCATGAGAAAGTCGTTGAACAGAGTCAGCGACTTACACGGCTTCGAAG
JMFS069F05+           CTAAAGTGGCTATCATGAGAAAGTCGTTGAACAGAGTCAGCGACTTACACGGCTTCGAAG
rJMFF001E12+          CTAAAGTGGCTNTCATGNGAAAGTCGTTGAACAGAGTCAGNGACTTNCCCGGNTTTGAAG
rJMFF013E02+          CTAAAGNGGCTATCATGAGAAAGTNGTTGAACAGAGTCAGNGACTTACCCGGCTTNGAAG
rJMFF035A05+          NTAAAGNGGCTNTCATGAGAAAGTCGTTGAACAGAGTCAGNGACTTACCCGGCTTTGAAG
                      ____________________________________________________________
consensus             CTAAAGTGGCTATCATGAGAAAGTCGTTGAACAGAGTCAGCGACTTACCCGGCTTTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           ACGCCAGATTTTAGACCTCA--TTTTTTTTTTTAATTATTATTAATGCATATTACTCC-G
JMFS069F05+           ACGCCAGATTTTAGACCTCA--TTTTTTTTTTTAATTATTATTAATGCATATTACTCC-G
rJMFF001E12+          ACNCCAGATTTTAGNCCTCATTTTTTTTTTTTTAATTATTATTAATGCATATTACTCC-G
rJMSF030O17+                                TTTTTTNTTTTAATTATTATTAATGCATATTACTCTTG
rJMFF013E02+          ACNCCAGATTTTAGNCCTCA-TTTTTTTTTTTTAATTATTATTAATGCATATTACTCCGG
rJMFF035A05+          ACNCCAGATTTTAGNCCTCA-TTTTTTTTTTTTAATTATTATTAATGCATATTACTCC-G
                      ____________________________________________________________
consensus             ACGCCAGATTTTAGACCTCA-TTTTTTTTTTTTAATTATTATTAATGCATATTACTCC-G
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
JMFS069F05+           TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
rJMFF001E12+          TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
rJMSF030O17+          TAGTTAAGATTAGANTAGATTTAAGNATATAATAATATGTAGAANTAAANTTAGAAAAAA
rJMFF013E02+          TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
rJMFF035A05+          TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
                      ____________________________________________________________
consensus             TAGTTAAGATTAGATTAGATTTAAGAATATAATAATATGTAGAAATAAATTTAGAAAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
JMFS069F05+           AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
rJMFF001E12+          AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
rJMSF030O17+          AAGAAAAAGGNCCAAAAAA                                         
rJMFF013E02+          AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
rJMFF035A05+          AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
                      ____________________________________________________________
consensus             AAGAAAAAGGACCAAAAAAGCGTATATTATAATAGGGGCAAGGCAAGGCCAGAAGAGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
JMFS069F05+           CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
rJMFF001E12+          CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
rJMFF013E02+          CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
rJMFF035A05+          CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
                      ____________________________________________________________
consensus             CCCGACGGCTTGGCGCTTTCTGCAAGTTATGATTGATTGATTGAGGCAGTGAGGAATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS093G02+           GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAAT        
JMFS069F05+           GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAATGTTATTAT
rJMFF001E12+          GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAATGTTATTAT
rJMFF013E02+          GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAATGTTATTAT
rJMFF035A05+          GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAATGTTATTAT
                      ____________________________________________________________
consensus             GGGGAGCTCTCTACTTTGTCTTTATTTTCATATAAATTTCATTTTCAGTAATGTTATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS069F05+           AATATT                                                      
rJMFF001E12+          AATATTTATCTGTAGACTGTAGATGCT                                 
rJMFF013E02+          AATATTTATCTGTAGACTGTAGATGCT                                 
rJMFF035A05+          AATATTTATCTGTAGACTGTAGATGCTGTGGAATGAAATGATATCTCTAATGCATAATAT
                      ____________________________________________________________
consensus             AATATTTATCTGTAGACTGTAGATGCTGTGGAATGAAATGATATCTCTAATGCATAATAT