| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017A21 | Sequence | 585 | 008823 (5) | ref|XP_009588400.1| | 8e-65 | PREDICTED: histidine protein methyltransferase 1 homolog [Nicotiana tomentosifo | 788 | 008270 (5) | ref|XP_007034061.1| | 3e-93 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor |
| JMFF034I09 | Sequence | 551 | 008823 (5) | ref|XP_009588400.1| | 2e-51 | PREDICTED: histidine protein methyltransferase 1 homolog [Nicotiana tomentosifo | 744 | 008270 (5) | ref|XP_007034061.1| | 2e-73 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor |
| JMSF021H16 | Sequence | 663 | 008823 (5) | ref|XP_007034061.1| | 4e-79 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor | 742 | 008270 (5) | ref|XP_007034061.1| | 3e-94 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor |
| JMSF028E21 | Sequence | 554 | 008823 (5) | ref|XP_009588400.1| | 6e-56 | PREDICTED: histidine protein methyltransferase 1 homolog [Nicotiana tomentosifo | 715 | 008270 (5) | ref|XP_007034061.1| | 1e-80 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor |
| JMSF042I17 | Sequence | 720 | 008823 (5) | ref|XP_007034061.1| | 3e-67 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor | 746 | 008270 (5) | ref|XP_007034061.1| | 5e-95 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isofor |
This contig is upended
. : . : . : . : . : . :
rJMSF021H16+ GAACGG
rJMSF042I17+ GAACGG
rJMFF017A21+ GGCTCGGGAACGG
____________________________________________________________
consensus GGCTCGGGAACGG
. : . : . : . : . : . :
rJMSF021H16+ CAGTGCCGTCAACCTGAGAGCCCTTTGACTCCTTCTAGGCAGACTCTTGCTCCAACAGTA
rJMSF042I17+ CAGTGCCGTCAACCTGAGAGCCCTTTGACTCCTTCTAGGCAGACTCTTGCTCCAACAGTA
rJMSF028E21+ TGCTCCANCAGTA
rJMFF017A21+ CAGTGCCGTCAACNTGAGAGCCCTTTGACTCNTTCTAGGCAGACTCTTGCTCCAACAGTA
rJMFF034I09+ AGGCAGACTCTTGCTCCAACAGTA
____________________________________________________________
consensus CAGTGCCGTCAACCTGAGAGCCCTTTGACTCCTTCTAGGCAGACTCTTGCTCCAACAGTA
. : . : . : . : . : . :
rJMSF021H16+ AACTTTTATGCAGGGGAAT-GGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
rJMSF042I17+ AACTTTTATGCAGGGGAAT-GGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
rJMSF028E21+ AACTTTTATGCAGGGGAAT-GGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
rJMFF017A21+ AACTTTTATGCAGGGGAAT-GGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
rJMFF034I09+ AACTTTTATGCAGGGGAATGGGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
____________________________________________________________
consensus AACTTTTATGCAGGGGAAT-GGGGGGAACTGCCAACGGTGTTGTCTGTTGTTAGGAATGA
. : . : . : . : . : . :
rJMSF021H16+ TGCATCTGAGATACCTAGAGGGATGAGCCTCAGCTTCTCTGAGGAAGATTTAATGGATGG
rJMSF042I17+ TGCATCTGAGATACCTAGAGGGATGAGCCTCAGCTTCTCTGAGGAAGATTTAATGGATGG
rJMSF028E21+ TGCATCTGAGATACCTAGAGGGATGAGCCTCAGCTTCTCTGAGGAAGATTTAATGGATGG
rJMFF017A21+ TGCATCTGAGATACCTAGAGGGATGAGCCTCAGCTTCTCTGAGGAAGATTTAATGGATGG
rJMFF034I09+ TGCATCTGAGATACCTAGAGGGATGAGCNTCAGCTTCTCTGAGGAAGATTTAATGGATGG
____________________________________________________________
consensus TGCATCTGAGATACCTAGAGGGATGAGCCTCAGCTTCTCTGAGGAAGATTTAATGGATGG
. : . : . : . : . : . :
rJMSF021H16+ CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
rJMSF042I17+ CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
rJMSF028E21+ CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
rJMFF017A21+ CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
rJMFF034I09+ CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
____________________________________________________________
consensus CTGTAGTAGCCAAGATGGGAGCATCTTAGTCCATGAATCTTCCTCGAGGCGGTCTAGGAA
. : . : . : . : . : . :
rJMSF021H16+ ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
rJMSF042I17+ ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
rJMSF028E21+ ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
rJMFF017A21+ ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
rJMFF034I09+ ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
____________________________________________________________
consensus ACTGTCTGGAAGCAGGGCATGGGAGAGGGCTAGTGATGCAGACCAAGGAGAAAGTGGGTA
. : . : . : . : . : . :
rJMSF021H16+ TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
rJMSF042I17+ TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
rJMSF028E21+ TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
rJMFF017A21+ TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
rJMFF034I09+ TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
____________________________________________________________
consensus TGATGTTATTTTGATGACCGAGATTCCCTATTCAGTGGCCTCACTGAAGAAGCTGTATTC
. : . : . : . : . : . :
rJMSF021H16+ ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
rJMSF042I17+ ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
rJMSF028E21+ ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
rJMFF017A21+ ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
rJMFF034I09+ ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
____________________________________________________________
consensus ACTGATAAAAAAGTGCTTAAGGCCCCCTTATGGAGTAATGTACCTGGCAACAAAAAGAAA
. : . : . : . : . : . :
rJMSF021H16+ CTATGTTGGCTTCAACAGTGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
rJMSF042I17+ CTATGTTGGCTTCAACAGTGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
rJMSF028E21+ CTATGTTGGCTTCAACAGTGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
rJMFF017A21+ CTATGTTGGCTTCAACAGCGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
rJMFF034I09+ CTATGTTGGCTTCAACAGTGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
____________________________________________________________
consensus CTATGTTGGCTTCAACAGTGCTGCACGACACCTCCGGAGTCTGGTGGATGAGGAAGGTGT
. : . : . : . : . : . :
rJMSF021H16+ TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
rJMSF042I17+ TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
rJMSF028E21+ TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
rJMFF017A21+ TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
rJMFF034I09+ TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
____________________________________________________________
consensus TTTTGGTGCTCATTTGGTAACAGAGCTAACAGACAGAGAGATTTGGAAATTCTTTTTCAA
. : . : . : . : . : . :
rJMSF021H16+ ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
rJMSF042I17+ ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
rJMSF028E21+ ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
rJMFF017A21+ ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
rJMFF034I09+ ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
____________________________________________________________
consensus ATGAAAAGATGATCTCAGCTTTGCCCCAAAGGTTCTATTCATTCAATAATTGTTTCCAGT
. : . : . : . : . : . :
rJMSF021H16+ AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
rJMSF042I17+ AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
rJMSF028E21+ AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
rJMFF017A21+ AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
rJMFF034I09+ AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
____________________________________________________________
consensus AATATTATAATATAATAGTAAATTCTTAGCTTGTTATTAAGAAAAGATACACTACTGGAT
. : . : . : . : . : . :
rJMSF021H16+ GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
rJMSF042I17+ GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
rJMSF028E21+ GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
rJMFF017A21+ GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
rJMFF034I09+ GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
____________________________________________________________
consensus GGTTCAGTGCTTGTCTCCTGTAATTATGTTCTTTAAACTTGTTGTTTACGTTGAGAGAGA
. : . : . : . : . : . :
rJMSF021H16+ TGTAAATTTTATAGGCT
rJMSF042I17+ TGTAAATTTTATAGGC
rJMSF028E21+ TGTAAATTTTATAGGCTTGTGTAATATACTT
rJMFF017A21+ TGTAAATTTTATAGGCTTGTGTAATATACTTTGTTTTAGCATTGATGGAGGAGGAA
rJMFF034I09+ TGTAAATTTTATAGGCTTGTGTAATATACTTTGTTTTAGCATTGATGGAGGAGGAAAATC
____________________________________________________________
consensus TGTAAATTTTATAGGCTTGTGTAATATACTTTGTTTTAGCATTGATGGAGGAGGAAAATC