Contig 008267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021I05Sequence453000841 (3)474008267 (3)gb|KJB32900.1|4e-09hypothetical protein B456_005G267200 [Gossypium raimondii] gb|KJB32901.1| hypoth
JMFF034G07Sequence540000841 (3)ref|XP_011085221.1|2e-17PREDICTED: protein kinase PINOID-like [Sesamum indicum]671008267 (3)ref|XP_009759284.1|2e-37PREDICTED: protein kinase PINOID [Nicotiana sylvestris]
JMSF033E22Sequence540000841 (3)ref|XP_011085221.1|2e-17PREDICTED: protein kinase PINOID-like [Sesamum indicum]716008267 (3)gb|KDO75345.1|2e-83hypothetical protein CISIN_1g013016mg [Citrus sinensis]

Alignment

This contig is upended


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rJMSF033E22+                                               CGAAGAAAATCCAGACAGTGTCC
                      ____________________________________________________________
consensus                                                  CGAAGAAAATCCAGACAGTGTCC
 
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rJMSF033E22+          AACAGCCGGATGTTCGTGGCGGAGCCGATCACTGCCCGGTCATGCTCCTTCGTGGGGACC
                      ____________________________________________________________
consensus             AACAGCCGGATGTTCGTGGCGGAGCCGATCACTGCCCGGTCATGCTCCTTCGTGGGGACC
 
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rJMSF033E22+          CACGAGTACGTGGCGCCTGAGGTGGCCTCCGGCGGGTCCCACGGCAACGCCGTGGATTGG
                      ____________________________________________________________
consensus             CACGAGTACGTGGCGCCTGAGGTGGCCTCCGGCGGGTCCCACGGCAACGCCGTGGATTGG
 
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rJMSF033E22+          TGGGCGTTCGGGATATTCATGTACGAGATGATCTACGGAGGAACTCCGTTCGCGGGTGCA
rJMFF034G07+                                                           TCGCGGGTGCA
                      ____________________________________________________________
consensus             TGGGCGTTCGGGATATTCATGTACGAGATGATCTACGGAGGAACTCCGTTCGCGGGTGCA
 
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rJMSF033E22+          TCGAATGAGGATACGCTGCGGAACATAGTACAGAAGCCCTTGACGTTCCCGAACGACGCG
rJMFF034G07+          TCGAATGAGGATACGCTGCGGAACATAGTACAGAAGCCCTTGACGTTCCCGAACGACGCG
                      ____________________________________________________________
consensus             TCGAATGAGGATACGCTGCGGAACATAGTACAGAAGCCCTTGACGTTCCCGAACGACGCG
 
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rJMSF033E22+          GCGGTTGGGATGAGCGAAATGCACGCGCGGGATTTGATCTCCGGGTTGCTGAACCGAAAC
rJMFF034G07+          GCGGTTGGGATGAGCGAAATGCACGCGCGGGATTTGATCTCCGGGTTGCTGAACCGAAAC
                      ____________________________________________________________
consensus             GCGGTTGGGATGAGCGAAATGCACGCGCGGGATTTGATCTCCGGGTTGCTGAACCGAAAC
 
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rJMSF033E22+          CCGACAAGGCGACTCGGGGCGAGGCGCGGGTCGGCCGACGTGAAGACCCACCCGTTTTTT
rJMFF021I05+                                                CGTGAAGACCCACCCGTTTTTT
rJMFF034G07+          CCGACAAGGCGACTCGGGGCGAGGCGCGGGTCGGCCGACGTGAAGACCCACCCGTTTTTT
                      ____________________________________________________________
consensus             CCGACAAGGCGACTCGGGGCGAGGCGCGGGTCGGCCGACGTGAAGACCCACCCGTTTTTT
 
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rJMSF033E22+          AAGGGCTTGAATTTCGCGCTTATAAGATCGGTGACGCCTCCCTCGGTCCCCGGGATTCGG
rJMFF021I05+          AAGGGCTTGAATTTCGCGCTTATAAGATCGGTGACGCCTCCCTCGGTCCCCGGGATTCGG
rJMFF034G07+          AAGGGCTTGAATTTCGCGCTTATAAGATCGGTGACGCCTCCCTCGGTCCCCGGGATTCGG
                      ____________________________________________________________
consensus             AAGGGCTTGAATTTCGCGCTTATAAGATCGGTGACGCCTCCCTCGGTCCCCGGGATTCGG
 
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rJMSF033E22+          AGACACAAGACGACGTCGCATCCGGGTGACGGCTCCAGCCATCATACGGCGCCGTTTGAT
rJMFF021I05+          AGACACAAGACGACGTCGCATCCGGGTGACGGCTCCAGCCATCATACGGCGCCGTTNGAT
rJMFF034G07+          AGACACAAGACGACGTCGCATCCGGGTGACGGCTCCAGCCATCATACGGCGCCGTTTGAT
                      ____________________________________________________________
consensus             AGACACAAGACGACGTCGCATCCGGGTGACGGCTCCAGCCATCATACGGCGCCGTTTGAT
 
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rJMSF033E22+          TTCTTCTGACCATCACAATTTAGCCATGGCAGTTTTGATTTTTACTATGGGAAAGAGTGA
rJMFF021I05+          TTCTTNTGACCATCACAATTTAGCCATGGCAGTTTTGATTTTTACTATGGGAAAGAGTGA
rJMFF034G07+          TTCTTCTGACCATCACAATTTAGCCATGGCAGTTTTGATTTTTACTATGGGAAAGAGTGA
                      ____________________________________________________________
consensus             TTCTTCTGACCATCACAATTTAGCCATGGCAGTTTTGATTTTTACTATGGGAAAGAGTGA
 
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rJMSF033E22+          AGAAGATTCCTTCTGATTATATATTTTCGTCAGCTTTTACTGTTCATGTGAAAAGGAAAG
rJMFF021I05+          AGAAGATTCCTTCTGATTATATATTTTCGTCAGCTTTTACTGTTCATGTGAAAAGGAAAG
rJMFF034G07+          AGAAGATTCCTTCTGATTATATATTTTCGTCAGCTTTTACTGTTCATGTGAAAAGGAAAG
                      ____________________________________________________________
consensus             AGAAGATTCCTTCTGATTATATATTTTCGTCAGCTTTTACTGTTCATGTGAAAAGGAAAG
 
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rJMSF033E22+          AAAAGAAGGATAAAAAAATAACGACAAGCTTTTAGAAAATGTTCCTAAATCATGATAAGT
rJMFF021I05+          AAAAGAAGGATAAAAAAATAACGACAAGCTTTTAGAAAATGTTCCTAAATCATGATAAGT
rJMFF034G07+          AAAAGAAGGATAAAAAAATAACGACAAGCTTTTAGAAAATGTTCCTAAATCATGATAAGT
                      ____________________________________________________________
consensus             AAAAGAAGGATAAAAAAATAACGACAAGCTTTTAGAAAATGTTCCTAAATCATGATAAGT
 
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rJMSF033E22+          CGGTGACTCAGTAATAAGGTCAAATACTGACGT                           
rJMFF021I05+          CGGTGACTCAGTAATAAGGTCAAATACTGACGTGTACAAGGTATTTGTTTATTTTGGTCA
rJMFF034G07+          CGGTGACTCAGTAATAAGGTCAAATACTGACGTGTACAAGGTATTTGTTTATTTTGGTCA
                      ____________________________________________________________
consensus             CGGTGACTCAGTAATAAGGTCAAATACTGACGTGTACAAGGTATTTGTTTATTTTGGTCA
 
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rJMFF021I05+          AAATTTTTACATTATCATTGTNGAGTTTTAAACATTGGTTTATTTTCTCAACTATTGAAC
rJMFF034G07+          AAATTTTTACATTATCATTGTTGAGTTTTAAACATTGGTTTATTTTCTCAACTATTGAAC
                      ____________________________________________________________
consensus             AAATTTTTACATTATCATTGTTGAGTTTTAAACATTGGTTTATTTTCTCAACTATTGAAC
 
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rJMFF021I05+          CAGTGAATCAAGTCTGTACAAGTTAATAGTTA                            
rJMFF034G07+          CAGTGAATCAAGTCTGTACAAGTTAATAGTTATGTATGTACAACTAGTGATCAAACTAGA
                      ____________________________________________________________
consensus             CAGTGAATCAAGTCTGTACAAGTTAATAGTTATGTATGTACAACTAGTGATCAAACTAGA