Contig 008266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005A15Sequence500000840 (450)732008266 (6)ref|XP_009617683.1|4e-54PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]
JMFF006G09Sequence569000840 (450)770008266 (6)ref|XP_009617683.1|9e-62PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]
JMFF012L13Sequence517000840 (450)734008266 (6)ref|XP_009617683.1|2e-53PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]
JMFF012M21Sequence447000840 (450)741008266 (6)ref|XP_009617683.1|3e-53PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]
JMFF014M24Sequence598000840 (450)792008266 (6)ref|XP_009617683.1|6e-63PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]
JMFF033P16Sequence743008266 (6)ref|XP_009617683.1|4e-54PREDICTED: arginine decarboxylase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF006G09+                                                                    AA
rJMFF014M24+                                                          AGCATTGAACAA
                      ____________________________________________________________
consensus                                                             AGCATTGAACAA
 
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rJMFF006G09+          CTGGCTGCTGTGGATGGAATCTGTGACCTGGTTTCTAAGGCCATTGGTGCTTATGATCCT
rJMFF012M21+                                                  CCATTGGTGCTTATGATCCT
rJMFF014M24+          CTGGCTGCTGTGGATGGAATCTGTGACCTGGTTTCTAAGGCCATTGGTGCTTATGATCCT
rJMFF005A15+                                               AGGCCATTGGTGCTTATGATCCT
rJMFF012L13+                                               AGGCCATTGGTGCTTATGATCCT
rJMFF033P16+                                               AGGCCATTGGTGCTTATGATCCT
                      ____________________________________________________________
consensus             CTGGCTGCTGTGGATGGAATCTGTGACCTGGTTTCTAAGGCCATTGGTGCTTATGATCCT
 
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rJMFF006G09+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAATTCCTGATTTCTGGGCTTTT
rJMFF012M21+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAGTTCCTGATTTCTGGGCTTTT
rJMFF014M24+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAGTTCCTGATTTCTGGGCTTTT
rJMFF005A15+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAATTCCTGATTTCTGGGCTTTT
rJMFF012L13+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAATTCCTGATTTCTGGGCTTTT
rJMFF033P16+          GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAATTCCTGATTTCTGGGCTTTT
                      ____________________________________________________________
consensus             GTCTGCACTTACAATGTCAATTTGTCTGTCTTCACTTCAATTCCTGATTTCTGGGCTTTT
 
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rJMFF006G09+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
rJMFF012M21+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
rJMFF014M24+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
rJMFF005A15+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
rJMFF012L13+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
rJMFF033P16+          GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
                      ____________________________________________________________
consensus             GGCCAGTTATTTCCAATTGTTCCAATCCACCGTCTGGATGAACGTCCCGGGGCTCGGGGC
 
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rJMFF006G09+          ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
rJMFF012M21+          ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
rJMFF014M24+          ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
rJMFF005A15+          ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
rJMFF012L13+          ATATTGTNTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
rJMFF033P16+          ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
                      ____________________________________________________________
consensus             ATATTGTCTGACTTGACCTGTGACAGTGATGGGAAGATTGATAAGTTCGTTGGGGGTGAA
 
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rJMFF006G09+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
rJMFF012M21+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
rJMFF014M24+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
rJMFF005A15+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
rJMFF012L13+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
rJMFF033P16+          TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
                      ____________________________________________________________
consensus             TCAAGCTTACCTCTTCATGAATTGGGAGGCAATGGAGGGCGGTACTATTTGGGTATGTTC
 
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rJMFF006G09+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
rJMFF012M21+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
rJMFF014M24+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
rJMFF005A15+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
rJMFF012L13+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
rJMFF033P16+          GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
                      ____________________________________________________________
consensus             GAGACTCTCAAGCACCGTGCAGAAGAATTCCTGCATGACGAGGACAATGGAGGGATGGCC
 
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rJMFF006G09+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
rJMFF012M21+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
rJMFF014M24+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
rJMFF005A15+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
rJMFF012L13+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
rJMFF033P16+          TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
                      ____________________________________________________________
consensus             TTCGCCTCCCTCGCAAGCAGCCTCGCGAACTCTTTCCACAACATGCCTTACCTTGTTGTT
 
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rJMFF006G09+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
rJMFF012M21+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
rJMFF014M24+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
rJMFF005A15+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
rJMFF012L13+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
rJMFF033P16+          GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
                      ____________________________________________________________
consensus             GGCTCTACTTGCTGCCTCACTGCTGCCACCACCCCCGGCAGTGGTTACTATTATGGCAAT
 
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rJMFF006G09+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
rJMFF012M21+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
rJMFF014M24+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
rJMFF005A15+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
rJMFF012L13+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
rJMFF033P16+          GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
                      ____________________________________________________________
consensus             GACGTGAGCGCTGCTAACCCTATCGCAGATTCCTCGCCCGGTGAGGATGAGCACTGGTCT
 
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rJMFF006G09+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
rJMFF012M21+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
rJMFF014M24+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
rJMFF005A15+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
rJMFF012L13+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
rJMFF033P16+          TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
                      ____________________________________________________________
consensus             TATTGTATTGCTTGAGTTCGTCCTGGCATGGCATACCCCATTTCCGCCATTTTCAAGTTT
 
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rJMFF006G09+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
rJMFF012M21+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
rJMFF014M24+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
rJMFF005A15+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
rJMFF012L13+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
rJMFF033P16+          GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
                      ____________________________________________________________
consensus             GTTGTCTGAGGTCGTCGTCGTCTTCTGTTTTATTAATTATTGGTTCAGCTATTATTGTAT
 
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rJMFF006G09+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
rJMFF012M21+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
rJMFF014M24+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
rJMFF005A15+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
rJMFF012L13+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
rJMFF033P16+          TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
                      ____________________________________________________________
consensus             TTCCCTTTCTAGTGTAGTAGATGCAAGAGGCAGCAGGCCGGAAGGATTGAAGGAAGGAAT
 
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rJMFF006G09+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCA            
rJMFF012M21+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCATCTTTAATAAA 
rJMFF014M24+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCATCTTTAATAAAC
rJMFF005A15+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCAT           
rJMFF012L13+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCATCT         
rJMFF033P16+          TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCATCTTTAATAAAC
                      ____________________________________________________________
consensus             TAACTCTGTTGTTTCAGTGTTTAATTCCCTTCCCCTCTGTTATCATCATCTTTAATAAAC