| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033N05 | Sequence | 547 | 002218 (8) | ref|XP_009616512.1| | 6e-61 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 772 | 008265 (7) | ref|XP_011101473.1| | 2e-112 | PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI |
| JMSF007M20 | Sequence | 281 | 002218 (8) | 735 | 008265 (7) | ref|XP_006362822.1| | 1e-109 | PREDICTED: histidine decarboxylase-like isoform X1 [Solanum tuberosum] ref|XP_00 | |||
| JMSF021N21 | Sequence | 640 | 002218 (8) | ref|XP_009616512.1| | 2e-47 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 741 | 008265 (7) | ref|XP_011101473.1| | 4e-111 | PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI |
| JMSF022N08 | Sequence | 669 | 002218 (8) | ref|XP_009616512.1| | 2e-91 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 732 | 008265 (7) | ref|XP_011101473.1| | 6e-109 | PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI |
| JMSF029M02 | Sequence | 659 | 002218 (8) | ref|XP_009616512.1| | 7e-91 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 682 | 008265 (7) | ref|XP_011101473.1| | 8e-95 | PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI |
| JMSF043C18 | Sequence | 781 | 002218 (8) | ref|XP_009616512.1| | 1e-92 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 808 | 008265 (7) | ref|XP_011101473.1| | 3e-117 | PREDICTED: serine decarboxylase-like [Sesamum indicum] ref|XP_011101480.1| PREDI |
| JMSF045A01 | Sequence | 747 | 002218 (8) | ref|XP_009616512.1| | 2e-113 | PREDICTED: serine decarboxylase [Nicotiana tomentosiformis] ref|XP_009616514.1| | 844 | 008265 (7) | ref|XP_004237774.1| | 4e-117 | PREDICTED: serine decarboxylase [Solanum lycopersicum] ref|XP_010320069.1| PREDI |
This contig is upended
. : . : . : . : . : . :
rJMSF045A01+ TGTGGGTATTCACATAATCGGTTTTTATA
____________________________________________________________
consensus TGTGGGTATTCACATAATCGGTTTTTATA
. : . : . : . : . : . :
rJMSF045A01+ TACACTGTGATGGAGCCCCTCTTTGGACTTATGATGCCATTTGTGAAAACGTGCACCAAA
____________________________________________________________
consensus TACACTGTGATGGAGCCCCTCTTTGGACTTATGATGCCATTTGTGAAAACGTGCACCAAA
. : . : . : . : . : . :
rJMSF045A01+ AGTTTCNTTTCAAGAAGCCTATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
rJMSF007M20+ ATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
rJMSF022N08+ CAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
rJMSF043C18+ TTTCAAGAAGCCTATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
rJMSF021N21+ AAGCCTATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
rJMFF033N05+ AAGCNTATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
____________________________________________________________
consensus AGTTTCNTTTCAAGAAGCCTATTGGCAGTGTTAGCGTTTCTGGTCACAAGTTTGTGGGAT
. : . : . : . : . : . :
rJMSF045A01+ GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMSF007M20+ GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMSF022N08+ GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMSF043C18+ GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMSF029M02+ TGGTGTTCAGTNGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMSF021N21+ GTCCANTGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
rJMFF033N05+ GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
____________________________________________________________
consensus GTCCAATGCCCTGTGGTGTTCAGTTGACTAGGTTAGACCACATCAATGCACTCTCAAGCA
. : . : . : . : . : . :
rJMSF045A01+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMSF007M20+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMSF022N08+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMSF043C18+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMSF029M02+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMSF021N21+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
rJMFF033N05+ ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
____________________________________________________________
consensus ACGTGGAGTACCTTGCTTCAAGGGATGCCACCATCATGGGGAGCCGAAATGGCCATGCTC
. : . : . : . : . : . :
rJMSF045A01+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMSF007M20+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMSF022N08+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMSF043C18+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMSF029M02+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMSF021N21+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
rJMFF033N05+ CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
____________________________________________________________
consensus CAATCTTTCTCTGGTACACACTGAATAGGAAAGGGTACAAGGGCTTCCAGAAAGAAGTCC
. : . : . : . : . : . :
rJMSF045A01+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMSF007M20+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMSF022N08+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMSF043C18+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMSF029M02+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMSF021N21+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
rJMFF033N05+ AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
____________________________________________________________
consensus AAAAGTGTCTTAGGAATGCACACTACCTAAAGGATAAGCTTAGAGGAGCTGGCATCAGTG
. : . : . : . : . : . :
rJMSF045A01+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMSF007M20+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMSF022N08+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMSF043C18+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMSF029M02+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMSF021N21+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
rJMFF033N05+ CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
____________________________________________________________
consensus CGATGCTGAATGAGCTCAGTAGCACTGTAGTGTTTGAGAGACCTAAAGACGAGGAGTTTG
. : . : . : . : . : . :
rJMSF045A01+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMSF007M20+ TTCGGTGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMSF022N08+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMSF043C18+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMSF029M02+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMSF021N21+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
rJMFF033N05+ TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
____________________________________________________________
consensus TTCGGCGTTGGCAGCTCGCTTGCGAAAGAAACATGTCTCACGTTGTCGTGATGCCCAGTG
. : . : . : . : . : . :
rJMSF045A01+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMSF007M20+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMSF022N08+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMSF043C18+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMSF029M02+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMSF021N21+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
rJMFF033N05+ TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
____________________________________________________________
consensus TAACAGTCGAGAAGCTGGATTGTTTTCTCGACGAATTGATTCAAGCTCGGTCAGTTTGGT
. : . : . : . : . : . :
rJMSF045A01+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMSF007M20+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMSF022N08+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMSF043C18+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMSF029M02+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMSF021N21+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
rJMFF033N05+ ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
____________________________________________________________
consensus ATGAAGGTGGGAATTCAAAACCTCCTTGTCTTGCAGAAGATGTAGGGGTTTCAAACTGTT
. : . : . : . : . : . :
rJMSF045A01+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMSF007M20+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMSF022N08+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMSF043C18+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMSF029M02+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMSF021N21+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
rJMFF033N05+ GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
____________________________________________________________
consensus GCTGTGTCCTCCACAAATGATGCAATAATAATCCAGAAGGCCGCAGTTTCATTCTAGGTT
. : . : . : . : . : . :
rJMSF045A01+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMSF007M20+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMSF022N08+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMSF043C18+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMSF029M02+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMSF021N21+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
rJMFF033N05+ TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
____________________________________________________________
consensus TGTGTTTGCCAGTGTGATAGTGTATTACTTCTGAATCTAATAGTCGTTGGTTTAGAATGT
. : . : . : . : . : . :
rJMSF045A01+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
rJMSF007M20+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
rJMSF022N08+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTACCGGATACGAA
rJMSF043C18+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
rJMSF029M02+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
rJMSF021N21+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
rJMFF033N05+ GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
____________________________________________________________
consensus GTTTCCTCGGGGGTTTCGGTGTGCTTGTAGTTTTTAGTTTTAATTCCTA-CGGATACGAA
. : . : . : . : . : . :
rJMSF045A01+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAAC
rJMSF007M20+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAAC
rJMSF022N08+ TTTATAATTTTCGTATTCATTTTAG
rJMSF043C18+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAAC
rJMSF029M02+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAAC
rJMSF021N21+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAAC
rJMFF033N05+ TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAACAATATGCACTACACATTAATAAAC
____________________________________________________________
consensus TTTATAATTTTCGTATTCATTTTAGTGTTCAAAAACAATATGCACTACACATTAATAAAC