Contig 008263:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D24Sequence435003217 (4)ref|XP_009587220.1|112PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]805008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMFF033C22Sequence544003217 (4)ref|XP_009587220.1|151PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]757008263 (4)ref|XP_009587220.1|138PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]
JMSF037M12Sequence622003217 (4)ref|XP_009587220.1|176PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]682008263 (4)ref|XP_009793275.1|114PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMSF045D05Sequence781003217 (4)ref|XP_009587220.1|218PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]692008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


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rJMFF005D24+                                          AAATGAATAGATCTCAGATGTCTGACAG
                      ____________________________________________________________
consensus                                             AAATGAATAGATCTCAGATGTCTGACAG
 
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rJMSF045D05+                                                                  TTCA
rJMFF005D24+          CAACAAAAGCAAGATACCGTTTCTTTGAAGGTGCCACCAAATGTTCGGGAATGTTTTTCA
                      ____________________________________________________________
consensus             CAACAAAAGCAAGATACCGTTTCTTTGAAGGTGCCACCAAATGTTCGGGAATGTTTTTCA
 
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rJMSF045D05+          ACTACTCACTTGGCATTACATTCCAAAATGACATCTTCTAAGGAAGATCATGCTTCGTTT
rJMFF005D24+          ACTACTCACTTGGCATTACATTCCAAAATGACATCTTCTAAGGAAGATCATGCTTCGTTT
rJMFF033C22+                               TCCAAAATGACATCTTNTAAGGAAGATCATGCTTCGTTT
                      ____________________________________________________________
consensus             ACTACTCACTTGGCATTACATTCCAAAATGACATCTTCTAAGGAAGATCATGCTTCGTTT
 
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rJMSF045D05+          CAACCAACTGCTTGTGATAAAAGTGGACACATGAAGAAGAAAGACCTACGTAGCATATTG
rJMFF005D24+          CAACCAACTGCTTGTGATAAAAGTGGACACATGAAGAAGAAAGACCTACGTAGCATATTG
rJMSF037M12+                    CTTGTGATANAAGTGGACACATGAAGAAGAAAGACCTACGTAGCATATTG
rJMFF033C22+          CAACCAACTGCTTGTGATAAAAGTGGACACATGAAGAAGAAAGACCTACGTAGCATATTG
                      ____________________________________________________________
consensus             CAACCAACTGCTTGTGATAAAAGTGGACACATGAAGAAGAAAGACCTACGTAGCATATTG
 
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rJMSF045D05+          CCTGGCTCGGATTCTTCTATGAGGTCAGCACAAACTGTTTCAAGTATTAGTCATGCTGAA
rJMFF005D24+          CCTGGCTCGGATTCTTCTATGAGGTCAGCACAAACTGTTTCAAGTATTAGTCATGCTGAA
rJMSF037M12+          CNTGGCTCGGATTCTTCTATGNGGTCAGCACAANCTGTTTCAAGTATTAGTCANGCTGAA
rJMFF033C22+          CCTGGCTCGGATTCTTCTATGAGGTCAGCACAAACTGTTTCAAGTATTAGTCATGCTGAA
                      ____________________________________________________________
consensus             CCTGGCTCGGATTCTTCTATGAGGTCAGCACAAACTGTTTCAAGTATTAGTCATGCTGAA
 
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rJMSF045D05+          GAGGAACTTGGTCTCTCTTCCTCAAGAAACAAGGCGAAACATCTGAAGGATAAAGTTGGG
rJMFF005D24+          GAGGAACTTGGTCTCTCTTCCTCAAGAAACAAGGCGAAACATCTGAAGGATAAAGTTGGG
rJMSF037M12+          GAGGAACTTGGTCTCTCTTCCTCAAGAAACAAGGCGANACATNTGAAGGATAAAGNTGGG
rJMFF033C22+          GAGGAACTTGGTCTCTCTTCCTCAAGAAACAAGGCGAAACATCTGAAGGATAAAGTTGGG
                      ____________________________________________________________
consensus             GAGGAACTTGGTCTCTCTTCCTCAAGAAACAAGGCGAAACATCTGAAGGATAAAGTTGGG
 
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rJMSF045D05+          GCAGAAAAATTTGACGAGAGCAGAAAAGCTAAAGATGAATATGAAGCCAAGACTGAGATT
rJMFF005D24+          GCAGAAAAATTTGACGAGAGCAGAAAAGCTAAAGATGAATATGAAGCCAAGACTGAGATT
rJMSF037M12+          GCAGAAAAATTTGACGNGAGCAGAAAAGCTAANGATGNATATGAAGCCAAGACTGAGANT
rJMFF033C22+          GCAGAAAAATTTGACGAGAGCAGAAAAGCTAAAGATGAATATGAAGCCAAGACTGAGATT
                      ____________________________________________________________
consensus             GCAGAAAAATTTGACGAGAGCAGAAAAGCTAAAGATGAATATGAAGCCAAGACTGAGATT
 
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rJMSF045D05+          CAATCTCTAGTCAAGCTCAATTTGAAACTCCTATCCAAGGATAAAAAGCTAGAAGCCGAG
rJMFF005D24+          CAATCTCTAGTCAAGCTCAATTTGAAACTCCTATCCAAGGATAAAAAGCTAGAAGCCGAG
rJMSF037M12+          CAATCTCTAGTCAAGCTCAATTTGAAACTCCTATCCAAGGATAAAAAGCTAGAAGCCGAG
rJMFF033C22+          CAATCTCTAGTCAAGCTCAATTTGAAACTCCTATCCAAGGATAAAAAGCTAGAAGCCGAG
                      ____________________________________________________________
consensus             CAATCTCTAGTCAAGCTCAATTTGAAACTCCTATCCAAGGATAAAAAGCTAGAAGCCGAG
 
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rJMSF045D05+          AAATTTAAAGAAATTGCAAGGCTCTCCACTCATTCGATCTTAGCTGCTTGTGGTTTGGAG
rJMFF005D24+          AAATTTAAAGAAATTGCAAGGCTCTCCACTCATTCGATCTTAGCTGCTTGTGGTTTGGAG
rJMSF037M12+          AAATTTAAAGAAATTGCAAGGCTCTCCACTCNTTCGATCTTAGCTGCTTGTGGTTTGGAG
rJMFF033C22+          AAATTTAAAGAAATTGCAAGGCTCTCCACTCATTCGATCTTAGCTGCTTGTGGTTTGGAG
                      ____________________________________________________________
consensus             AAATTTAAAGAAATTGCAAGGCTCTCCACTCATTCGATCTTAGCTGCTTGTGGTTTGGAG
 
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rJMSF045D05+          CAACGACGCCCTGGGATTCCTGCATTTCCAAACTCCATATGCTTCCATGTGAATGAAGTT
rJMFF005D24+          CAACGACGCCCTGGGATTCCTGCATTTCCAAACTCCATATGCTTCCATGTGAATGAAGTT
rJMSF037M12+          CAACGACGCCCTGGGATTCCTGCATTTCCAAACTCCATATGCTTCCATGTGAATGAAGTT
rJMFF033C22+          CAACGACGCCCTGGGATTCCTGCATTTCCAAACTCCATATGCTTCCATGTGAATGAAGTT
                      ____________________________________________________________
consensus             CAACGACGCCCTGGGATTCCTGCATTTCCAAACTCCATATGCTTCCATGTGAATGAAGTT
 
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rJMSF045D05+          TCTGAAATTCGGAGATCCACTTTAATGCCCAACTCTTGTAGAGAGTGTTTCTTCTTATTT
rJMFF005D24+          TCTGAAATTCGGAGATCCACTTTAATGCCCAACTCTTGTAGAGAGTGTTTCTTCTTATTT
rJMSF037M12+          TCTGAAATTCGGAGATCCACTTTAATGCCCAACTCTTGTAGAGAGTGTTTCTTCTTATTT
rJMFF033C22+          TCTGAAATTCGGAGATCCACTTTAATGCCCAACTCTTGTAGAGAGTGTTTCTTCTTATTT
                      ____________________________________________________________
consensus             TCTGAAATTCGGAGATCCACTTTAATGCCCAACTCTTGTAGAGAGTGTTTCTTCTTATTT
 
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rJMSF045D05+          GTAAAAGATGTTGTCAGCAGTATAATGTTGGAGAGAAGGGGGTGAACCATTTACTTTAGA
rJMFF005D24+          GTAAAAGATGTTGTCAGCAGTATAATGTTGGAGAGAAGGGGGTGAACCATTTACTTTAGA
rJMSF037M12+          GTAAAAGATGTTGTCAGCAGTATAATGTTGGAGAGAAGGGGGTGAACCATTTACTTTAGA
rJMFF033C22+          GTAAAAGATGTTGTCAGCAGTATAATGTTGGAGAGAAGGGGGTGAACCATTTACTTTAGA
                      ____________________________________________________________
consensus             GTAAAAGATGTTGTCAGCAGTATAATGTTGGAGAGAAGGGGGTGAACCATTTACTTTAGA
 
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rJMSF045D05+          ATATGTATAGTTTTGGTTGAGGGGTGATTGTTGGCCTCTCAAGTGGATGCACATTGTATA
rJMFF005D24+          ATATGTATAGTTTTGGTTGAGGGGTGATTGTTGGCCTCTCAAGTGGATGCACATTGTATA
rJMSF037M12+          ATATGTATAGTTTTGGTTGAGGGGTGATTGTCGGCCTCTCAAGTGGATGCACATTGTATA
rJMFF033C22+          ATATGTATAGTTTTGGTTGAGGGGTGATTGTTGGCCTCTCAAGTGGATGCACATTGTATA
                      ____________________________________________________________
consensus             ATATGTATAGTTTTGGTTGAGGGGTGATTGTTGGCCTCTCAAGTGGATGCACATTGTATA
 
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rJMSF045D05+          T                                                           
rJMFF005D24+          --TTTTTGTACCTTGAATCTTTTGTCATTGTCTAGTAGATAATAATAATGTAATAACAT 
rJMSF037M12+          TCTTTTGTAACCTTGAATCTTTTGNCATTGTCTAGTAGATAATAATAATGTAATAACATT
rJMFF033C22+          --TTTTTGTACCTTGAATCTTTTGTCATTGTCTAGTAGATAATAATAATGTAATAACATT
                      ____________________________________________________________
consensus             T-TTTTTGTACCTTGAATCTTTTGTCATTGTCTAGTAGATAATAATAATGTAATAACATT
 
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rJMSF037M12+          ANCTCTTTAAATCTGTCATGTCTACCAAAATC                            
rJMFF033C22+          AACTCTTTAAATCTGTCATGTCTACCAAAATCATGATGGGTTGTAAACTTCAGAAAATAC
                      ____________________________________________________________
consensus             AACTCTTTAAATCTGTCATGTCTACCAAAATCATGATGGGTTGTAAACTTCAGAAAATAC