Contig 008262:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H08Sequence551007285 (2)ref|XP_006438229.1|2e-57hypothetical protein CICLE_v10031037mg [Citrus clementina] gb|ESR51469.1| hypoth743008262 (2)gb|AAM67369.1|1e-71unknown [Arabidopsis thaliana]
JMFF033A22Sequence592007285 (2)ref|XP_006438229.1|1e-66hypothetical protein CICLE_v10031037mg [Citrus clementina] gb|ESR51469.1| hypoth534008262 (2)ref|XP_010932070.1|2e-15PREDICTED: uncharacterized protein At1g04910 [Elaeis guineensis]

Alignment

This contig is upended


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rJMFF004H08+                                                                  TCTT
                      ____________________________________________________________
consensus                                                                     TCTT
 
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rJMFF004H08+          GTTACAAAGGAGGAATTGGCAAGAAAGGAGGAATTGGATGAGTTCAGGAAGCATGTAACA
                      ____________________________________________________________
consensus             GTTACAAAGGAGGAATTGGCAAGAAAGGAGGAATTGGATGAGTTCAGGAAGCATGTAACA
 
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rJMFF004H08+          AGTTTGGCGGCCCTTGACTTCCTTGTTTGTTTGAAATCTGATGTTTTTGTAATGACACAT
                      ____________________________________________________________
consensus             AGTTTGGCGGCCCTTGACTTCCTTGTTTGTTTGAAATCTGATGTTTTTGTAATGACACAT
 
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rJMFF004H08+          GGAGGAAACTTTGCTAAATTGATAATTGGGTATAGAAGGTACATGGGTCACCGCCAGAAA
                      ____________________________________________________________
consensus             GGAGGAAACTTTGCTAAATTGATAATTGGGTATAGAAGGTACATGGGTCACCGCCAGAAA
 
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rJMFF004H08+          TCTATAAAACCGGACAAGGGTCTCATGTCCAAATCCTTAGGAGATCCATACATGGGCTGG
                      ____________________________________________________________
consensus             TCTATAAAACCGGACAAGGGTCTCATGTCCAAATCCTTAGGAGATCCATACATGGGCTGG
 
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rJMFF004H08+          GCTTCCTTCAAGGATGACGTTGTCATTACCCACCAGACAAGGACTGGTTTACCTGAAGAA
rJMFF033A22+                TTCAAGGATGACGTTGTCATTACCCACCAGACAAGGACTGGTTTACCTGAAGAA
                      ____________________________________________________________
consensus             GCTTCCTTCAAGGATGACGTTGTCATTACCCACCAGACAAGGACTGGTTTACCTGAAGAA
 
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rJMFF004H08+          ACATTCCCGAACTATGACATCTGGGAGAACCCCTTAACTCCTTGCATGTGTAAAGCCTGA
rJMFF033A22+          ACATTCCCGAACTATGACATCTGGGAGAACCCCTTAACTCCTTGCATGTGTAAAGCCTGA
                      ____________________________________________________________
consensus             ACATTCCCGAACTATGACATCTGGGAGAACCCCTTAACTCCTTGCATGTGTAAAGCCTGA
 
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rJMFF004H08+          CTACATTAGTCGGTAAAGGTGAATATCTTTAACTCTCTTTTGGAAGAGTATTCTTTTCAG
rJMFF033A22+          CTACATTAGTCGGTAAAGGTGAATATCTTTAACTCTCTTTTGGAAGAGTATTCTTTTCAG
                      ____________________________________________________________
consensus             CTACATTAGTCGGTAAAGGTGAATATCTTTAACTCTCTTTTGGAAGAGTATTCTTTTCAG
 
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rJMFF004H08+          AAAACATTTTGCTTAAGCAATCGGCAGTTCTATAGTGTTAGCATTGTCAAAAAGGTGCAA
rJMFF033A22+          AAAACATTTTGCTTAAGCAATCGGCAGTTCTATAGTGTTAGCATTGTCAAAAAGGTGCAA
                      ____________________________________________________________
consensus             AAAACATTTTGCTTAAGCAATCGGCAGTTCTATAGTGTTAGCATTGTCAAAAAGGTGCAA
 
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rJMFF004H08+          GGAGAGCAGCACTTTGGGACAGAGAACTTCCTCCCAGCATAATCTGAGATGGACATGGAA
rJMFF033A22+          CGAGAGCAGCACTTTGGGACAGAGAACTTCCTCCCAGCATAATCTGAGATGGACATGGAA
                      ____________________________________________________________
consensus             GGAGAGCAGCACTTTGGGACAGAGAACTTCCTCCCAGCATAATCTGAGATGGACATGGAA
 
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rJMFF004H08+          ATCTGAATGACATGAGAGCTGCAAGTAGGTGAAAGTACACCTTGCATATGTGGAGCAGCC
rJMFF033A22+          ATCTGAATGACATGAGAGCTGCAAGTAGGTGAAAGTACACCTTGCATATGTGGAGCAGCC
                      ____________________________________________________________
consensus             ATCTGAATGACATGAGAGCTGCAAGTAGGTGAAAGTACACCTTGCATATGTGGAGCAGCC
 
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rJMFF004H08+          TATGATTTTCACCCGTGTTGTGATTCTTCTCCTAGCCTCTATGAGGACTTGCAGTTTTGT
rJMFF033A22+          TATGATTTTCACCCGTGTTGTGATTCTTCTCCTAGCCTCTATGAGGACTTGCAGTTTTGT
                      ____________________________________________________________
consensus             TATGATTTTCACCCGTGTTGTGATTCTTCTCCTAGCCTCTATGAGGACTTGCAGTTTTGT
 
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rJMFF004H08+          ATGTTGGAGGTTAGATTATTTCTCGATTGTTTCATGATAATGTGTAAATTACAACACTGC
rJMFF033A22+          ATGTTGGAGGTTAGATTATTTCTCGATTGTTTCATGATAATGTGTAAATTACAACACTGC
                      ____________________________________________________________
consensus             ATGTTGGAGGTTAGATTATTTCTCGATTGTTTCATGATAATGTGTAAATTACAACACTGC
 
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rJMFF004H08+          TAAGCAGCATGGTGTATGA                                         
rJMFF033A22+          TAAGCAGCATGGTGTATGATGTTTTCTTGATTAGAATTATAACCTAATCTAAAAATACTC
                      ____________________________________________________________
consensus             TAAGCAGCATGGTGTATGATGTTTTCTTGATTAGAATTATAACCTAATCTAAAAATACTC