clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003H14 | Sequence | 590 | 001558 (7) | ref|XP_009794076.1| | 4e-53 | PREDICTED: acid beta-fructofuranosidase AIV-18 [Nicotiana sylvestris] | 777 | 008261 (5) | gb|AAK71505.2| | 2e-101 | soluble acid invertase Ib2FRUCT3 [Ipomoea batatas] |
JMFF020F16 | Sequence | 611 | 001558 (7) | gb|ACC93585.1| | 1e-56 | beta-fructofuranosidase [Solanum tuberosum] | 737 | 008261 (5) | gb|AAK71505.2| | 3e-98 | soluble acid invertase Ib2FRUCT3 [Ipomoea batatas] |
JMFF025B08 | Sequence | 574 | 001558 (7) | ref|XP_004143623.1| | 3e-50 | PREDICTED: beta-fructofuranosidase, soluble isoenzyme I-like [Cucumis sativus] | 660 | 008261 (5) | gb|AAK71505.2| | 8e-80 | soluble acid invertase Ib2FRUCT3 [Ipomoea batatas] |
JMFF032L23 | Sequence | 597 | 001558 (7) | ref|XP_009794076.1| | 1e-54 | PREDICTED: acid beta-fructofuranosidase AIV-18 [Nicotiana sylvestris] | 800 | 008261 (5) | gb|AAK71505.2| | 9e-76 | soluble acid invertase Ib2FRUCT3 [Ipomoea batatas] |
JMFF038P16 | Sequence | 661 | 001558 (7) | ref|NP_001234618.1| | 7e-67 | acid beta-fructofuranosidase precursor [Solanum lycopersicum] gb|AAL75449.1|AF46 | 777 | 008261 (5) | gb|AAK71505.2| | 2e-105 | soluble acid invertase Ib2FRUCT3 [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMFF038P16+ CACTGCATTTAGA
rJMFF003H14+ ACTGCATTTAGA
____________________________________________________________
consensus CACTGCATTTAGA
. : . : . : . : . : . :
rJMFF038P16+ CAAGAAGACAGGAAGTCA-TCTGCTTCAGTGGCCAATTGAAGAAGTAAAGAGGTTGAGAT
rJMFF003H14+ CAAGAAGACAGGAAGTCATTCTGCTTCAGTGGCCAATTGAAGAAGTAAAGAGGTTGAGAT
rJMFF020F16+ CCAATTGAAGAAGTAAAGAGGTTGAGAT
rJMFF032L23+ TGAAGAAGTAAAGAGGTTGAGAT
____________________________________________________________
consensus CAAGAAGACAGGAAGTCATTCTGCTTCAGTGGCCAATTGAAGAAGTAAAGAGGTTGAGAT
. : . : . : . : . : . :
rJMFF038P16+ CAGGCGACCCCATTGTCACAAAGGTCAATCTTCAACCAGGTGAAATCCTACCAATCCACA
rJMFF025B08+ CAGGTGAAATCNTACCAATCCACA
rJMFF003H14+ CAGGCGACCCCATTGTCACAAAGGTCAATCTTCAACCAGGTGAAATCCTACCAATCCACA
rJMFF020F16+ CAGGCGACCCCATTGTCACAAAGGTCAATCTTCAACCAGGTGAAATCCTACCAATCCACA
rJMFF032L23+ CAGGCGACCCCATTGTCACAAAGGTCAATCTTCAACCAGGTGAAATCCTACCAATCCACA
____________________________________________________________
consensus CAGGCGACCCCATTGTCACAAAGGTCAATCTTCAACCAGGTGAAATCCTACCAATCCACA
. : . : . : . : . : . :
rJMFF038P16+ TT-CCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
rJMFF025B08+ TTCCCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
rJMFF003H14+ TT-CCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
rJMFF020F16+ TT-CCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
rJMFF032L23+ TT-CCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
____________________________________________________________
consensus TT-CCAGCTGCTGCGCAGTTAGACATTATTGCCTCGTTTGAAGTGATGAATGAAGAGGCA
. : . : . : . : . : . :
rJMFF038P16+ GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGAGA
rJMFF025B08+ GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGGGA
rJMFF003H14+ GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGAGA
rJMFF020F16+ GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGAGA
rJMFF032L23+ GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGAGA
____________________________________________________________
consensus GTCGAAGGTGAAGGCGATTTTAGGTACAACTGCAGTAGCAGTGGTGGTGCTGTTAAGAGA
. : . : . : . : . : . :
rJMFF038P16+ GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
rJMFF025B08+ GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
rJMFF003H14+ GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
rJMFF020F16+ GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
rJMFF032L23+ GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
____________________________________________________________
consensus GGCGCTTTGGGGCCATTTGGTTTGGTAGTTGCAGCTGATGAAACACTTGCCGAGCTAACG
. : . : . : . : . : . :
rJMFF038P16+ CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
rJMFF025B08+ CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
rJMFF003H14+ CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
rJMFF020F16+ CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
rJMFF032L23+ CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
____________________________________________________________
consensus CCTGTTTACTTCTATGTTCAAAAAGGTGGTGATGGGAAGGTAGAGACTCATTTCTGCACT
. : . : . : . : . : . :
rJMFF038P16+ GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
rJMFF025B08+ GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
rJMFF003H14+ GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
rJMFF020F16+ GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
rJMFF032L23+ GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
____________________________________________________________
consensus GACTTGACAAGGTCATCAGAAGCATCTGGAGTTACGAAAGAAGTTTATGGTAGCACCGTA
. : . : . : . : . : . :
rJMFF038P16+ CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
rJMFF025B08+ CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
rJMFF003H14+ CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
rJMFF020F16+ CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
rJMFF032L23+ CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
____________________________________________________________
consensus CCTGTTATTGATGATGAAAAATATTCAGCAAGAATATTGGTTGACCATTCAATCGTGGAG
. : . : . : . : . : . :
rJMFF038P16+ AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGAATATATCCAACCAAAGCAATA
rJMFF025B08+ AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGAATATATCCAACCAAAGCAATA
rJMFF003H14+ AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGAATATATCCAACCAAAGCAATA
rJMFF020F16+ AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGAATATATCCAACCAAAGCAATA
rJMFF032L23+ AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGA--ATATCCAACCAAAGCAATA
____________________________________________________________
consensus AGTTTTGGTCAAGGAGGAAGAACAGTTATAACATCAAGAATATATCCAACCAAAGCAATA
. : . : . : . : . : . :
rJMFF038P16+ TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
rJMFF025B08+ TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
rJMFF003H14+ TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
rJMFF020F16+ TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
rJMFF032L23+ TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
____________________________________________________________
consensus TATGAAGCGGCAAGAGTCTTCTTGTTCAACAATGCCACAGGGACAAGTGTTAAAGCGTCT
. : . : . : . : . : . :
rJMFF038P16+ GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
rJMFF025B08+ GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
rJMFF003H14+ GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
rJMFF020F16+ GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
rJMFF032L23+ GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
____________________________________________________________
consensus GTGAAGATATGGCAAATGAATTCAGCTGATATTAAGCCATTCCCATTTTGATCAATTCTT
. : . : . : . : . : . :
rJMFF038P16+ GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
rJMFF025B08+ GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
rJMFF003H14+ GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
rJMFF020F16+ GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
rJMFF032L23+ GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
____________________________________________________________
consensus GAATTGTTTGCTTCCAATTCACTTTCTCATCTGCCTTAGCTATTATATGAATAATTGAAG
. : . : . : . : . : . :
rJMFF038P16+ CTTGTATATTAGACTCAATCTCACACTAACAAGTGGTAT
rJMFF025B08+ CTTGTATATTAGACTCAATCTCACACTAACAAGTGG
rJMFF003H14+ CTTGTATATTAGACTCAATCTCACACTAACAAGTGGTAT
rJMFF020F16+ CTTGTATATTAGACTCAATCTCACACTAACAAGTGGTAT
rJMFF032L23+ CTTGTATATTAGACTCAATCTCACACTAACAAGTGGTATGCCAGATTCCATGCTTGATTT
____________________________________________________________
consensus CTTGTATATTAGACTCAATCTCACACTAACAAGTGGTATGCCAGATTCCATGCTTGATTT
. : . : . : . : . : . :
rJMFF032L23+ ATGTGTATTCCAAGGGTGTGTTTGGTTACGTTCGAACATGGGAATGGAATGATAATCAAA
____________________________________________________________
consensus ATGTGTATTCCAAGGGTGTGTTTGGTTACGTTCGAACATGGGAATGGAATGATAATCAAA