Contig 008260:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032J15Sequence579000183 (3)774008260 (2)ref|XP_009598530.1|1e-33PREDICTED: protein FRIGIDA-ESSENTIAL 1-like [Nicotiana tomentosiformis]
JMFF038E15Sequence453000183 (3)379008260 (2)ref|XP_010686420.1|9e-11PREDICTED: uncharacterized protein LOC104900642 isoform X1 [Beta vulgaris subsp

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF032J15+ AACAGAGCTCTAATAAACATTCAGTTTCTAGTCACAGTTCTCACAAGGATGCTG
                      ____________________________________________________________
consensus AACAGAGCTCTAATAAACATTCAGTTTCTAGTCACAGTTCTCACAAGGATGCTG
 
. : . : . : . : . : . :
rJMFF032J15+ TTCCCCGAAACCTGTCAGAGAAAGAAAAAGAACTGATGGATACTGCAGGGGCTCATCAGG
                      ____________________________________________________________
consensus TTCCCCGAAACCTGTCAGAGAAAGAAAAAGAACTGATGGATACTGCAGGGGCTCATCAGG
 
. : . : . : . : . : . :
rJMFF032J15+ AGAACATTTATTATACTTCCTTGAAAGAAAAGCAGCTTCCGAAATCTGCTGATTTCGGAG
                      ____________________________________________________________
consensus AGAACATTTATTATACTTCCTTGAAAGAAAAGCAGCTTCCGAAATCTGCTGATTTCGGAG
 
. : . : . : . : . : . :
rJMFF032J15+ ATACTACTGAAGCTGATAAAACACACTGTAGTAATGATACCGTGCAGAAGAATGGGGCAC
                      ____________________________________________________________
consensus ATACTACTGAAGCTGATAAAACACACTGTAGTAATGATACCGTGCAGAAGAATGGGGCAC
 
. : . : . : . : . : . :
rJMFF032J15+ AGTATAAGATGGAACTGAAAGTAGAGAGTGTGAAAAGTGGAAATGATGTTGATGGATTAG
                      ____________________________________________________________
consensus AGTATAAGATGGAACTGAAAGTAGAGAGTGTGAAAAGTGGAAATGATGTTGATGGATTAG
 
. : . : . : . : . : . :
rJMFF032J15+ TTCACCAGGACTCTAGAGCTTTAAAACAGTTTGAGTCTGCTGTTGTGGAATTTATCAAGG
                      ____________________________________________________________
consensus TTCACCAGGACTCTAGAGCTTTAAAACAGTTTGAGTCTGCTGTTGTGGAATTTATCAAGG
 
. : . : . : . : . : . :
rJMFF038E15+ GTCTTTTGAGTGGTGATGNNTACAAGGCGATAG
rJMFF032J15+ AACTATTAAAACCAACTTGGCGTGAGGGTCTTTTGAGTCGTGATGCTTACAAGGCGATAG
                      ____________________________________________________________
consensus AACTATTAAAACCAACTTGGCGTGAGGGTCTTTTGAGTGGTGATGCTTACAAGGCGATAG
 
. : . : . : . : . : . :
rJMFF038E15+ TTAAAAAAACAAAAGCTAATTTTCTTAGCACAATGCAGCCNGAACAAATTCGTGATAATT
rJMFF032J15+ TTAAAAAAACAAAAGCTAATTTTCTTAGCACAATGCAGCCTGAACAAATTCCTGATAATT
                      ____________________________________________________________
consensus TTAAAAAAACAAAAGCTAATTTTCTTAGCACAATGCAGCCTGAACAAATTCGTGATAATT
 
. : . : . : . : . : . :
rJMFF038E15+ CTGATTCAGTAAAAGAATACCTCTCATTTGCTCAGCCGAAACTTGAGAAGCTTGTTCTGG
rJMFF032J15+ CTGATTCAGTAAAAGAATACCTCTCATTTGCTCAGCCGAAACTTGAGAAGCTTGTTCTGG
                      ____________________________________________________________
consensus CTGATTCAGTAAAAGAATACCTCTCATTTGCTCAGCCGAAACTTGAGAAGCTTGTTCTGG
 
. : . : . : . : . : . :
rJMFF038E15+ GTTATGTAGATAAGTATGGCAGGTCATGATATGCATTGCAAGTGTGCAACCTAGATACTA
rJMFF032J15+ GTTATGTAGATAAGTATGGCAGGTCATGATATGCATTGCAAGTGTGCAACCTAGATACTA
                      ____________________________________________________________
consensus GTTATGTAGATAAGTATGGCAGGTCATGATATGCATTGCAAGTGTGCAACCTAGATACTA
 
. : . : . : . : . : . :
rJMFF038E15+ GGTAGTTTGGAGCTATCCCAATGGGATACTAGGAGTTCTGCCAACTGGTATTGGTGTTCT
rJMFF032J15+ GGTAGTTTGGAGCTATCCCAATGGGATACTAGGAGTTCTGCCAACTGGTATTGGTGTTCT
                      ____________________________________________________________
consensus GGTAGTTTGGAGCTATCCCAATGGGATACTAGGAGTTCTGCCAACTGGTATTGGTGTTCT
 
. : . : . : . : . : . :
rJMFF038E15+ TCCTTTCAAGAGCATTTTGTTATTTCTAGAGCCTAAGTGTATACATATAAAGACTAAAGT
rJMFF032J15+ TCCTTTCAAGAGCATTTTGTTATTTCTAGAGCCTAAGTGTATACATATAAAGACTAAAGT
                      ____________________________________________________________
consensus TCCTTTCAAGAGCATTTTGTTATTTCTAGAGCCTAAGTGTATACATATAAAGACTAAAGT
 
. : . : . : . : . : . :
rJMFF038E15+ GCTGTTAGTGAATTTAGTTGTTTTTAGACATTAATTAACTATATAT
rJMFF032J15+ GCTGTTAGTGAATTTAGTTGTTTTTAGACATTAATTAACTATATATTTTCTGCATAATAT
                      ____________________________________________________________
consensus GCTGTTAGTGAATTTAGTTGTTTTTAGACATTAATTAACTATATATTTTCTGCATAATAT