Contig 008258:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025L06Sequence535000651 (6)dbj|BAA34995.1|7e-52L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]783008258 (6)dbj|BAA34995.1|3e-135L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]
JMFF031I15Sequence600000651 (6)dbj|BAA34995.1|8e-48L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]712008258 (6)dbj|BAA34995.1|2e-115L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]
JMFF038F21Sequence509000651 (6)dbj|BAA34995.1|1e-28L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]764008258 (6)dbj|BAA34995.1|2e-129L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]
JMSF010H23Sequence250000651 (6)733008258 (6)dbj|BAA34995.1|1e-131L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]
JMSF011K20Sequence269000651 (6)760008258 (6)dbj|BAA34995.1|2e-130L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]
JMSF021P06Sequence666000651 (6)dbj|BAA34995.1|2e-68L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]753008258 (6)dbj|BAA34995.1|2e-132L-Galactono-1,4-lactone dehydrogenase [Ipomoea batatas]

Alignment

This contig is upended


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rJMSF011K20+                                                   ATGTCAAAAAAATCAACCC
                      ____________________________________________________________
consensus                                                      ATGTCAAAAAAATCAACCC
 
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rJMSF011K20+          AGCTGAGGCCGANTTTGGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
rJMSF010H23+                       TTTGGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
rJMSF021P06+                       TTTGGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
rJMFF025L06+                       TTTGGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
rJMFF038F21+                          GGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
                      ____________________________________________________________
consensus             AGCTGAGGCCGANTTTGGAGAAAGTCAGAAGGATACCGGGTAGGGTGGAGCGATGAAATT
 
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rJMSF011K20+          TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
rJMSF010H23+          TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
rJMSF021P06+          TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
rJMFF025L06+          TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
rJMFF038F21+          TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
rJMFF031I15+                  TGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
                      ____________________________________________________________
consensus             TTAGGGTTTGATTGCGGTGGTCATCAATGGGTCTCGGAAACTTGTTTTCCTGCGGGTACC
 
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rJMSF011K20+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
rJMSF010H23+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
rJMSF021P06+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
rJMFF025L06+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
rJMFF038F21+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
rJMFF031I15+          CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
                      ____________________________________________________________
consensus             CTTTCAAAACCAAGCATGAAAGACCTGGAATTCATAGAGCAACTAATGCAGCTTATAGAG
 
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rJMSF011K20+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
rJMSF010H23+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
rJMSF021P06+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
rJMFF025L06+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
rJMFF038F21+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
rJMFF031I15+          AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
                      ____________________________________________________________
consensus             AAAGAAAGTATACCCGCTCCTGCACCTATTGAGCAGAGATGGACAGCTTGCAGCAAGAGC
 
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rJMSF011K20+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
rJMSF010H23+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
rJMSF021P06+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGTTTGGGATAATC
rJMFF025L06+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
rJMFF038F21+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
rJMFF031I15+          CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
                      ____________________________________________________________
consensus             CTGATGAGTCCGGCTTATAGTTCAGTGGATGATGATATTTTCTCATGGGTTGGGATAATC
 
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rJMSF011K20+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
rJMSF010H23+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
rJMSF021P06+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
rJMFF025L06+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
rJMFF038F21+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
rJMFF031I15+          ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
                      ____________________________________________________________
consensus             ATGTATCTTCCAACAATGGATGCTCGTGAAAGAAAACATATAACCGAGGAATTTTTCCAC
 
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rJMSF011K20+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
rJMSF010H23+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
rJMSF021P06+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
rJMFF025L06+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
rJMFF038F21+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
rJMFF031I15+          TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
                      ____________________________________________________________
consensus             TACAGGCATTTGACACAAGCACATTTGTGGGATCATTATTCTGCTTATGAACATTGGGCC
 
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rJMSF011K20+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
rJMSF010H23+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
rJMSF021P06+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
rJMFF025L06+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
rJMFF038F21+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
rJMFF031I15+          AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
                      ____________________________________________________________
consensus             AAGATTGAGGTTCCAAAAGACAAGGAAGAACTACAAGCACTACAGGCGAGACTAAGGAAG
 
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rJMSF011K20+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
rJMSF010H23+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
rJMSF021P06+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
rJMFF025L06+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
rJMFF038F21+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
rJMFF031I15+          AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
                      ____________________________________________________________
consensus             AAATTCCCTGTGGATGCATACAACCGAGCACGCCAAGAGCTGGACCCCAATCGCATCCTT
 
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rJMSF011K20+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
rJMSF010H23+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
rJMSF021P06+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
rJMFF025L06+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
rJMFF038F21+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
rJMFF031I15+          TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
                      ____________________________________________________________
consensus             TCTAATAACATGCTTGAAAAGCTGTTCCCTTCGTCGTGATAGACATCTATTGGTTCGTTT
 
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rJMSF011K20+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
rJMSF010H23+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
rJMSF021P06+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
rJMFF025L06+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
rJMFF038F21+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
rJMFF031I15+          ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
                      ____________________________________________________________
consensus             ATCTTTCCCTTGTTGATCTTTGAATTCGAGGCACAAAAGCGCATACTTGCCTATAAACTT
 
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rJMSF011K20+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
rJMSF010H23+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
rJMSF021P06+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
rJMFF025L06+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
rJMFF038F21+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
rJMFF031I15+          GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
                      ____________________________________________________________
consensus             GTATATGATTTTGCTAGATTGTTACCTGGAAATGCTACAGAAACTCATATGATTTGGGAT
 
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rJMSF011K20+          TTAATATGCTTGAAGGCTGCT                                       
rJMSF010H23+          TTAATATGCTTGAAGGCTGCTTTT                                    
rJMSF021P06+          TTAATATGCTTGAAGGCTGCTTTT                                    
rJMFF025L06+          TTAATATGCTTGAAGGCTGCTTTTTCACAGGGCTACTGCCTCCAAGTTTCTGAATAAAA 
rJMFF038F21+          TTAATATGCTTGAAGGCTGCTTTTTCACAGGGCTACTGCCTCCAAGTTTCNGAATAAAA 
rJMFF031I15+          TTAATATGCTTGAAGGCTGCTTTTTCACAGGGCTACTGCCTCCAAGTTTCTGAATAAAAA
                      ____________________________________________________________
consensus             TTAATATGCTTGAAGGCTGCTTTTTCACAGGGCTACTGCCTCCAAGTTTCTGAATAAAAA