Contig 008255:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030C20Sequence532008255 (2)ref|XP_009770565.1|2e-26PREDICTED: uncharacterized protein PAM68-like [Nicotiana sylvestris]667008255 (2)ref|XP_009621677.1|6e-34PREDICTED: uncharacterized protein PAM68-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF030C20-                                                   ATCTCTGGATAAGGCTGCGT
rJMFF030C20+                                                               GCTGCGT
                      ____________________________________________________________
consensus                                                     ATCTCTGGATAAGGCTGCGT
 
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JMFF030C20-           TTTTATACTTCATAGCACACAATTCTCTGATCAGAAACTAAAATGGCTAAAGAAGCCATG
rJMFF030C20+          TTTTATACTTCATAGCACACAATTCTCTGATCAGAAACTAAAATGGCTAAAGAAGCCATG
                      ____________________________________________________________
consensus             TTTTATACTTCATAGCACACAATTCTCTGATCAGAAACTAAAATGGCTAAAGAAGCCATG
 
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JMFF030C20-           AAAACTCTCATCGCTCTCGAACACCCTTTCCTCTACCTTCCAAA-CCCAATCCCATCCAC
rJMFF030C20+          AAAACTCTCATCGCTCTCGAACACCCTTTCNTCTACCTTCCAAACCCCAATCCCATCCAC
                      ____________________________________________________________
consensus             AAAACTCTCATCGCTCTCGAACACCCTTTCCTCTACCTTCCAAACCCCAATCCCATCCAC
 
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JMFF030C20-           TCAACGCATCTCGCTCCTCTCTCACGAACCCTCGAGGAATCCAAACTTCAACCGGAGGAG
rJMFF030C20+          TCAACGCATCTCGCTCCTCTCTCACGAACCCTCGAGGAATCCAAACTTCAACCGGAGGAG
                      ____________________________________________________________
consensus             TCAACGCATCTCGCTCCTCTCTCACGAACCCTCGAGGAATCCAAACTTCAACCGGAGGAG
 
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JMFF030C20-           AGCACGGCGGCTGCAAGCGGAAGCTGCAAAGGGCTTCGGCGGGGGCCCAGCCATGAAAAG
rJMFF030C20+          AGCACGGCGGCTGCAAGCGGAAGCTGCAAAGGGCTTCGGCGGGGGCCCAGCCATGAAAAG
                      ____________________________________________________________
consensus             AGCACGGCGGCTGCAAGCGGAAGCTGCAAAGGGCTTCGGCGGGGGCCCAGCCATGAAAAG
 
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JMFF030C20-           CAAGCCGAAGGCCGACAGAGACGAGGAGGGGGAGGACGAGGACGAGAAATTGCCGGAGGA
rJMFF030C20+          CAAGCCGAAGGCCGACAGAGACGAGGAGGGGGAGGACGAGGACGAGAAATTGCCGGAGGA
                      ____________________________________________________________
consensus             CAAGCCGAAGGCCGACAGAGACGAGGAGGGGGAGGACGAGGACGAGAAATTGCCGGAGGA
 
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JMFF030C20-           TGTGTGGAACAGAATCACGAGGAGGATATTGTTTTACGTGGGAGCTCCGATGGCGACTGG
rJMFF030C20+          TGTGTGGAACAGAATCACGAGGAGGATATTGTTTTACGTGGGAGCTCCGATGGCGACTGG
                      ____________________________________________________________
consensus             TGTGTGGAACAGAATCACGAGGAGGATATTGTTTTACGTGGGAGCTCCGATGGCGACTGG
 
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JMFF030C20-           TCTTGGGGCGGTGCAAATCCTGGGCACGGTGAAGGAGCGAGGGATCTGGGACGTGCCTAA
rJMFF030C20+          TCTTGGGGCGGTGCAAATCCTGGGCACGGTGAAGGAGCGAGGGATCTGGGACGTGCCTAA
                      ____________________________________________________________
consensus             TCTTGGGGCGGTGCAAATCCTGGGCACGGTGAAGGAGCGAGGGATCTGGGACGTGCCTAA
 
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JMFF030C20-           CTGGGTGCCGATCTTGACGATTTTCGTGTTTCTGAGTGCGTCGAGTCTTGGAGTTGTGTA
rJMFF030C20+          CTGGGTGCCGATCTTGACGATTTTCGTGTTTCTGAGTGCGTCGAGTCTTGGAGTTGTGTA
                      ____________________________________________________________
consensus             CTGGGTGCCGATCTTGACGATTTTCGTGTTTCTGAGTGCGTCGAGTCTTGGAGTTGTGTA
 
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JMFF030C20-           TGGGGCTCTGTCGGCGAGCTGGGTTTCTGAGAG                           
rJMFF030C20+          TGGGGCTCTGTCGGCGAGCTGGGTTTCTGAGAGGGAGGGATCTGCTCTTGGGTTTGAAGA
                      ____________________________________________________________
consensus             TGGGGCTCTGTCGGCGAGCTGGGTTTCTGAGAGGGAGGGATCTGCTCTTGGGTTTGAAGA
 
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rJMFF030C20+          AGCTCAGAGAAATTGGGCTGAAATGTGGAGAGAAGAAGAAGATGATCAAAACAAGTAATC
                      ____________________________________________________________
consensus             AGCTCAGAGAAATTGGGCTGAAATGTGGAGAGAAGAAGAAGATGATCAAAACAAGTAATC
 
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rJMFF030C20+          AAATTATTATGTATATTTCATACTTTTATGTAATCAATCCTCCGTTTGCCTTTCTACGAA
                      ____________________________________________________________
consensus             AAATTATTATGTATATTTCATACTTTTATGTAATCAATCCTCCGTTTGCCTTTCTACGAA