Contig 008254:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029P22Sequence490011567 (2)emb|CCG20371.1|4e-53Ran GTPase activating protein 2 [Solanum tuberosum]735008254 (2)ref|XP_011090753.1|1e-59PREDICTED: RAN GTPase-activating protein 2-like isoform X1 [Sesamum indicum]
JMFF036O08Sequence579011567 (2)emb|CCG20371.1|2e-60Ran GTPase activating protein 2 [Solanum tuberosum]726008254 (2)ref|XP_011090754.1|6e-57PREDICTED: RAN GTPase-activating protein 2-like isoform X2 [Sesamum indicum] re

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF036O08+ ATCGCAA
rJMFF029P22+ AGGGAGCAATCGCAA
                      ____________________________________________________________
consensus AGGGAGCAATCGCAA
 
. : . : . : . : . : . :
rJMFF036O08+ TAGCCAATGCTCTCAAGGACTCGGCCCNTTCACTTAGAATCCTCGAGATGGCTGGGAACG
rJMFF029P22+ TAGCCAATGCTCTCAAGGACTCGGCCCCTTCACTTAGAATCCTCGAGATGGCTGGGAACG
                      ____________________________________________________________
consensus TAGCCAATGCTCTCAAGGACTCGGCCCCTTCACTTAGAATCCTCGAGATGGCTGGGAACG
 
. : . : . : . : . : . :
rJMFF036O08+ ATATAACTGCCAAAGGTGCACCCGCTTTAGCTGCATGTATATCCGAAAAGAAGCTTCTCA
rJMFF029P22+ ATATAACTGCCAAAGGTGCACCCGCTTTAGCTGCATGTATATCCGAAAAGAAGCTTCTCA
                      ____________________________________________________________
consensus ATATAACTGCCAAAGGTGCACCCGCTTTAGCTGCATGTATATCCGAAAAGAAGCTTCTCA
 
. : . : . : . : . : . :
rJMFF036O08+ CCAAGCTCAACCTGTCTGAGAATGAACTCAAGGATGATGGTGCGATCCAGATTGTGAAGG
rJMFF029P22+ CCAAGCTCAACCTGTCTGAGAATGAACTCAAGGATGATGGTGCGATCCAGATTGTGAAGG
                      ____________________________________________________________
consensus CCAAGCTCAACCTGTCTGAGAATGAACTCAAGGATGATGGTGCGATCCAGATTGTGAAGG
 
. : . : . : . : . : . :
rJMFF036O08+ CTCTGGAAGAAGGTCACGATCAATTGAAAGTGGTTGATATGAGCAGTAACTCATTGAGAA
rJMFF029P22+ CTCTGGAAGAAGGTCACGATCAATTGAAAGTGGTTGATATGAGCAGTAACTCATTGAGAA
                      ____________________________________________________________
consensus CTCTGGAAGAAGGTCACGATCAATTGAAAGTGGTTGATATGAGCAGTAACTCATTGAGAA
 
. : . : . : . : . : . :
rJMFF036O08+ GGGCTGGGGCTCGAGTGCTGGCTCAGACTCTGGTGCATAAACCCGAGTTTGAATCACTGA
rJMFF029P22+ GGGCTGGGGCTCGAGTGCTGGCTCAGACTCTGGTGCATAAACCCGAGTTTGAATCACTGA
                      ____________________________________________________________
consensus GGGCTGGGGCTCGAGTGCTGGCTCAGACTCTGGTGCATAAACCCGAGTTTGAATCACTGA
 
. : . : . : . : . : . :
rJMFF036O08+ ATGTTAACGGGAATTTCATCTCCGATGAAGGCATTGATGAGTTGAAAGATATCTTCAAGA
rJMFF029P22+ ATGTTAACGGGAATTTCATCTCCGATGAAGGCATTGATGAGTTGAAAGATATCTTCAAGA
                      ____________________________________________________________
consensus ATGTTAACGGGAATTTCATCTCCGATGAAGGCATTGATGAGTTGAAAGATATCTTCAAGA
 
. : . : . : . : . : . :
rJMFF036O08+ AATGCCCTGAAAAGCTTGCATCTTTGGAGGACAACGACCCCGAGGGCGAAGATGATGATG
rJMFF029P22+ AATGCCCTGAAAAGCTTGCATCTTTGGAGGACAACGACCCCGAGGGCGAAGATGATGATG
                      ____________________________________________________________
consensus AATGCCCTGAAAAGCTTGCATCTTTGGAGGACAACGACCCCGAGGGCGAAGATGATGATG
 
. : . : . : . : . : . :
rJMFF036O08+ ATGAGAAGGAATCCGGGGATGAGGGTGATGACAATGAACTAGAATCAAAACTCAAAACCC
rJMFF029P22+ ATGAGAAGGAATCCGGGGATGAGGGTGATGACAATGAACTAGAATCAAAACTCAAAACCC
                      ____________________________________________________________
consensus ATGAGAAGGAATCCGGGGATGAGGGTGATGACAATGAACTAGAATCAAAACTCAAAACCC
 
. : . : . : . : . : . :
rJMFF036O08+ TAGATGTCAACGAGGATGAGTAAATCCCCGCAAATATCAGGACCCTATCCCGACTCTCCA
rJMFF029P22+ TAGATGTCAACGAGGATGAGTAAATCCCCGCAAATATCAGGACCCTATCCCGACTCTCCA
                      ____________________________________________________________
consensus TAGATGTCAACGAGGATGAGTAAATCCCCGCAAATATCAGGACCCTATCCCGACTCTCCA
 
. : . : . : . : . : . :
rJMFF036O08+ AGAAGCACTAATGCTAAGTTCCGTTGAGACGAGATGTTGTTTCCCTATCGTTAGCCTAGC
rJMFF029P22+ AGAAGCACTAATGCAAAGTTCCGTTGAGACGAGATGTTGTTTCCATATCGTTAGCCTAGC
                      ____________________________________________________________
consensus AGAAGCACTAATGCTAAGTTCCGTTGAGACGAGATGTTGTTTCCCTATCGTTAGCCTAGC
 
. : . : . : . : . : . :
rJMFF036O08+ ATCTTAAAGTTTATGTAGCTGCTAGCAAAGATAAATTTTACCATTTCAATTTGTTTGTCA
rJMFF029P22+ ATCTTAAAGTTTATGTAGCTGCTAGCAAAGATAAATTTTACCATTTCAATTTGTTTGTCA
                      ____________________________________________________________
consensus ATCTTAAAGTTTATGTAGCTGCTAGCAAAGATAAATTTTACCATTTCAATTTGTTTGTCA
 
. : . : . : . : . : . :
rJMFF036O08+ GATTTGTAGACTCATCATTTCTACCATTTCAATGTACTATTGCTTTTAGCTAAAGGCTT
rJMFF029P22+ GATTTGTAGACTCATCATTTCTACCATTTCAATGTACTATTGCTTTTAGCTAAAGGCTTA
                      ____________________________________________________________
consensus GATTTGTAGACTCATCATTTCTACCATTTCAATGTACTATTGCTTTTAGCTAAAGGCTTA