Contig 008251:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024G15Sequence430008251 (5)ref|XP_009112745.1|2e-17PREDICTED: ABC transporter I family member 1 [Brassica rapa]788008251 (5)ref|XP_006350084.1|1e-141PREDICTED: ABC transporter I family member 1-like [Solanum tuberosum]
JMFF029B07Sequence677008251 (5)ref|XP_006350084.1|3e-113PREDICTED: ABC transporter I family member 1-like [Solanum tuberosum]
JMSF027P15Sequence659008251 (5)emb|CDP10207.1|5e-108unnamed protein product [Coffea canephora]784008251 (5)ref|XP_006350084.1|6e-140PREDICTED: ABC transporter I family member 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF024G15-                                                         GTGTCATTTGCCTT
                      ____________________________________________________________
consensus                                                           GTGTCATTTGCCTT
 
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JMFF024G15-           CACCCAAAAACCTGTAAGATGGGAGAGTGAGTTTGCAGTTCAGCATTCACCATCTGCAAT
                      ____________________________________________________________
consensus             CACCCAAAAACCTGTAAGATGGGAGAGTGAGTTTGCAGTTCAGCATTCACCATCTGCAAT
 
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JMFF024G15-           TACTCTACTACTTCAATTCAATTGGAGATCTCTATTTCCAGTTGAATTTTTCTTACCCTA
                      ____________________________________________________________
consensus             TACTCTACTACTTCAATTCAATTGGAGATCTCTATTTCCAGTTGAATTTTTCTTACCCTA
 
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JMFF024G15-           ACCACCCAGCAGCATCACCTTTATAGTGTTTGATGAAATGCCTATGTGAGAAGTAGCATT
                      ____________________________________________________________
consensus             ACCACCCAGCAGCATCACCTTTATAGTGTTTGATGAAATGCCTATGTGAGAAGTAGCATT
 
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JMFF024G15-           TCTTTACAAACAGTATTTTGAAGTAGAAAATATCTTGTAGATTGTCAGAGATATTATTCA
JMSF027P15-                                                           AGATATTATTCA
                      ____________________________________________________________
consensus             TCTTTACAAACAGTATTTTGAAGTAGAAAATATCTTGTAGATTGTCAGAGATATTATTCA
 
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JMFF024G15-           CAACTACTTATGTCCTTACGTAGACCACCACTTCCTCGGCTTCTCCTTAAGAATGTAGCT
JMSF027P15-           CAACTACTTATGTCCTTACGTAGACCACCACTTCCTCGGCTTCTCCTTAAGAATGTAGCT
rJMSF027P15+                                                              ATGTAGCN
rJMFF024G15+                                                              ATGTAGCT
                      ____________________________________________________________
consensus             CAACTACTTATGTCCTTACGTAGACCACCACTTCCTCGGCTTCTCCTTAAGAATGTAGCT
 
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JMFF024G15-           TGCATGAGAAACGCCCAGCAAATCCTCCGCCATGTAAATGTTTCTCTCCACGACGGTGGT
JMSF027P15-           TGCATGAGAAACGCCCAGCAAATCCTCCGCCATGTAAATGTTTCTCTCCACGACGGTGGT
rJMSF027P15+          TGCATGAGAAACGCCCAGCAAATCNTCCGCCATGTAAATGTTTCTCTCCACGACGGTGGT
rJMFF024G15+          TGCATGAGAAACGCCCAGCAAATCCTCCGCCATGTAAATGTTTCTCTCCACGACGGTGGT
                      ____________________________________________________________
consensus             TGCATGAGAAACGCCCAGCAAATCCTCCGCCATGTAAATGTTTCTCTCCACGACGGTGGT
 
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JMFF024G15-           GCCCTTGTACTCACAGGCGCTAATGGCTCGGGAAAAACTACCTTTTTGCGCATGTT    
JMSF027P15-           GCCCTTGTACTCACAGGCGCTAATGGCTCGGGAAAAACTACCTTTTTGCGCATGTTAGCC
rJMSF027P15+          GCCCTTGTACTCACAGGCGCTAATGGCTCGGGAAAAACTACCTTTTTGCGCATGTTAGCC
rJMFF024G15+          GCCCTNGTACTCACAGGCGCTAATGGCTCGGGAAAAACTACCTTTTTGCGCATGTTAGCC
rJMFF029B07+                                                     TTTTGCGCATGTTAGCC
                      ____________________________________________________________
consensus             GCCCTTGTACTCACAGGCGCTAATGGCTCGGGAAAAACTACCTTTTTGCGCATGTTAGCC
 
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JMSF027P15-           GGTTTTGCAAAACCGTCGGCTGGTGAGATACTCTGGAATGGTCACGACATCACTAGCTCG
rJMSF027P15+          GGTTTTGCAAAACCGTCGGCTGGTGAGATACTCTGGAATGGTCACGACATCACTAGCTCG
rJMFF024G15+          GGTTTTGCAAAACCGTCGGCTGGTGAGATACTCTGGAATGGTCACGACATCACTAGCTCG
rJMFF029B07+          GGTTTTGCAAAACCGTCGGCTGGTGAGATACTCTGGAATGGTCACGACATCACTAGCTCG
                      ____________________________________________________________
consensus             GGTTTTGCAAAACCGTCGGCTGGTGAGATACTCTGGAATGGTCACGACATCACTAGCTCG
 
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JMSF027P15-           GGAGTTTTCGAACAGTACAAACTTCAGCTCAATTGGCTCTCTCTCAAGGATGCTGTGAAG
rJMSF027P15+          GGAGTTTTCGAACAGTACAAACTTCAGCTCAATTGGCTCTCTCTCAAGGATGCTGTGAAG
rJMFF024G15+          GGAGTTTTCGAACAGTACAAACTTCAGCTCAATTGGCTCTCTCTCAAGGATGCTGTGAAG
rJMFF029B07+          GGAGTTTTCGAACAGTACAAACTTCAGCTCAATTGGCTCTCTCTCAAGGATGCTGTGAAG
                      ____________________________________________________________
consensus             GGAGTTTTCGAACAGTACAAACTTCAGCTCAATTGGCTCTCTCTCAAGGATGCTGTGAAG
 
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JMSF027P15-           GAGAAGTTCACAGTCCTGGACAATGTTCAATGGTTTGAAGTTCTCGAAGGCAAGCAGGGG
rJMSF027P15+          GAGAAGTTCACAGTCCTGGACAATGTTCAATGGTTTGAAGTTCTCGAAGGCAAGCAGGGG
rJMFF024G15+          GAGAAGTTCACAGTCCTGGACAATGTTCAATGGTTTGAAGTTCTCGAAGGCAAGCAGGGG
rJMFF029B07+          GAGAAGTTCACAGTCCTGGACAATGTTCAATGGTTTGAAGTTCTCGAAGGCAAGCAGGGG
                      ____________________________________________________________
consensus             GAGAAGTTCACAGTCCTGGACAATGTTCAATGGTTTGAAGTTCTCGAAGGCAAGCAGGGG
 
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JMSF027P15-           AAGTCTTTGCCCGCACTAGAACTCGTGGGGCTCGGGAGATTAGCAAACGAGAAGTCGAGA
rJMSF027P15+          AAGTCTTTGCCCGCACTAGAACTCGTGGGGCTCGGGAGATTAGCAAACGAGAAGTCGAGA
rJMFF024G15+          AAGTCTTTGCCCGCACTAGAACTCGTGGGGCTCGGGAGATTAGCAAACGAGAAGTCGAGA
rJMFF029B07+          AAGTCTTTGCCCGCACTAGAACTCGTGGGGCTCGGGAGATTAGCAAACGAGAAGTCGAGA
                      ____________________________________________________________
consensus             AAGTCTTTGCCCGCACTAGAACTCGTGGGGCTCGGGAGATTAGCAAACGAGAAGTCGAGA
 
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JMSF027P15-           ATGCTTTCCATGGGACAAAGGAAGAGGTTACAACTCGCCAGGATGTTGGCGATTGATCGG
rJMSF027P15+          ATGCTTTCCATGGGACAAAGGAAGAGGTTACAACTCGCCAGGATGTTGGCGATTGATCGG
rJMFF024G15+          ATGCTTTCCATGGGACAAAGGAAGAGGTTACAACTCGCCAGGATGTTGGCGATTGATCGG
rJMFF029B07+          ATGCTTTCCATGGGACAAAGGAAGAGGTTACAACTCGCCAGGATGTTGGCGATTGATCGG
                      ____________________________________________________________
consensus             ATGCTTTCCATGGGACAAAGGAAGAGGTTACAACTCGCCAGGATGTTGGCGATTGATCGG
 
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JMSF027P15-           CCTATTTGGTTGCTTGATGAGCCTTCGGTGGCGCTGGATGATGATGGCGTGAAATTGCTC
rJMSF027P15+          CCTATTTGGTTGCTTGATGAGCCTTCGGTGGCGCTGGATGATGATGGCGTGAAATTGCTC
rJMFF024G15+          CCTATTTGGTTGCTTGATGAGCCTTCGGTGGCGCTGGATGATGATGGCGTGAAATTGCTC
rJMFF029B07+          CCTATTTGGTTGCTTGATGAGCCTTCGGTGGCGCTGGATGATGATGGCGTGAAATTGCTC
                      ____________________________________________________________
consensus             CCTATTTGGTTGCTTGATGAGCCTTCGGTGGCGCTGGATGATGATGGCGTGAAATTGCTC
 
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JMSF027P15-           GAAACCATTATTGCTGAGC                                         
rJMSF027P15+          GAAACCATTATTGCTGAGCATAGAAAGAAAGGCGGCATTGTCATTGTGGCCACACATCTA
rJMFF024G15+          GAAACCATTATTGCTGAGCATAGAAAGAAAGGCGGCATTGTCATTGTGGCCACACATCTA
rJMFF029B07+          GAAACCATTATTGCTGAGCATAGAAAGAAAGGCGGCATTGTCATTGTGGCCACACATCTA
                      ____________________________________________________________
consensus             GAAACCATTATTGCTGAGCATAGAAAGAAAGGCGGCATTGTCATTGTGGCCACACATCTA
 
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rJMSF027P15+          CCGATTACAATTGAGGATGCCATGCATTTGAGGTTACCTCCAAGGTTCCCTCGAAGAATG
rJMFF024G15+          CCGATTACAATTGAGGATGCCATGCATTTGAGGTTACCTCCAAGGTTCCCTCGAAGAATG
rJMFF029B07+          CCGATTACAATTGAGGATGCCATGCATTTGAGGTTACCTCCAAGGTTCCCTCGAAGAATG
                      ____________________________________________________________
consensus             CCGATTACAATTGAGGATGCCATGCATTTGAGGTTACCTCCAAGGTTCCCTCGAAGAATG
 
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rJMSF027P15+          ACATTGGTGGACATGCTTGATCGAGGCGGATTGGAGTAATACTATAACATCAATTGCCTT
rJMFF024G15+          ACATTGGTGGACATGCTTGATCGAGGCGGATTGGAGTAATACTATAACATCAATTGCCTT
rJMFF029B07+          ACATTGGTGGACATGCTTGATCGAGGCGGATTGGAGTAATACTATAACATCAATTGCCTT
                      ____________________________________________________________
consensus             ACATTGGTGGACATGCTTGATCGAGGCGGATTGGAGTAATACTATAACATCAATTGCCTT
 
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rJMSF027P15+          TAGCTGTGATGTGAAGGTACCTAAGTTTTTTTCTTCTTCTTTTAAATATAGATACAAGAG
rJMFF024G15+          TAGCTGTGATGTGAAGGTACCTAAGTTTTTTTCTTCTTCTTTTAAATATAGATACAAGAG
rJMFF029B07+          TAGCTGTGATGTGAAGGTACCTAAGTTTTTTTCTTCTTCTTTTAAATATAGATACAAGAG
                      ____________________________________________________________
consensus             TAGCTGTGATGTGAAGGTACCTAAGTTTTTTTCTTCTTCTTTTAAATATAGATACAAGAG
 
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rJMSF027P15+          TGTAGGAAGAAAATTGCTACGTTGAGGTGGATTGCAATATAA                  
rJMFF024G15+          TGTAGGAAGAAAATTGCTACGTTGAGGTGGATNGCAATATAA                  
rJMFF029B07+          TGTAGGAAGAAAATTGCTACGTTGAGGTGGATTGCAATATAAACTTAAGCTATTCTTTGC
                      ____________________________________________________________
consensus             TGTAGGAAGAAAATTGCTACGTTGAGGTGGATTGCAATATAAACTTAAGCTATTCTTTGC