Contig 008250:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028N12Sequence506008250 (2)ref|XP_009798726.1|7e-51PREDICTED: acyl-coenzyme A thioesterase 13 [Nicotiana sylvestris]739008250 (2)ref|XP_009798726.1|1e-64PREDICTED: acyl-coenzyme A thioesterase 13 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF028N12- TGTGGTTACAGAAAGGAATACCGCAGTCAAACAC
                      ____________________________________________________________
consensus TGTGGTTACAGAAAGGAATACCGCAGTCAAACAC
 
. : . : . : . : . : . :
JMFF028N12- GTCCTTTCTCTACCTGAAACCTGACGACTGCGGAATTCTTCTGATGTTTTAAATTCAGCT
rJMFF028N12+ TGATGTTTTAAATTCAGCT
                      ____________________________________________________________
consensus GTCCTTTCTCTACCTGAAACCTGACGACTGCGGAATTCTTCTGATGTTTTAAATTCAGCT
 
. : . : . : . : . : . :
JMFF028N12- AAATCCAGGAAAGAAGATGGACTTATTGGAATCAGTAAAGCGATTCTTGGAGAACGAAGA
rJMFF028N12+ AAATCCAGGAAAGAAGATGGACTTATTGGAATCAGTAAAGCGATTCTTGGAGAACGAAGA
                      ____________________________________________________________
consensus AAATCCAGGAAAGAAGATGGACTTATTGGAATCAGTAAAGCGATTCTTGGAGAACGAAGA
 
. : . : . : . : . : . :
JMFF028N12- TGGCGAAAATGAGTCCACAATCGATTCCATGCCTGCCAAATTCATCGAGCCCATTGTCGC
rJMFF028N12+ TGGCGAAAATGAGTCCACAATCGATTCCATGCCTGCCAAATTCATCGAGCCCATTGTCGC
                      ____________________________________________________________
consensus TGGCGAAAATGAGTCCACAATCGATTCCATGCCTGCCAAATTCATCGAGCCCATTGTCGC
 
. : . : . : . : . : . :
JMFF028N12- GCAGGGGCTCAAGGTCGACCTGGTTGAGCCCGGCCGCCTTATCTGCTCTCTCAAAGTTCC
rJMFF028N12+ GCAGGGGCTCAAGGTCGACCTGGTTGAGCCCGGCCGCCTTATCTGCTCTCTCAAAGTTCC
                      ____________________________________________________________
consensus GCAGGGGCTCAAGGTCGACCTGGTTGAGCCCGGCCGCCTTATCTGCTCTCTCAAAGTTCC
 
. : . : . : . : . : . :
JMFF028N12- CCCGCGCCTAGTGGATGCCGGCAACAGATTGCACGGCGGAGCCATGGCGACGCTGCTTGA
rJMFF028N12+ CCCGCGCCTAGTGGATGCCGGCAACAGATTGCACGGCGGAGCCATGGCGACGCTGCTTGA
                      ____________________________________________________________
consensus CCCGCGCCTAGTGGATGCCGGCAACAGATTGCACGGCGGAGCCATGGCGACGCTGCTTGA
 
. : . : . : . : . : . :
JMFF028N12- CCTTCTGACTTCGGTGGTTTTTCACACTGCGGAATTGGGGACTTTTCATTCCGGGGTATC
rJMFF028N12+ CCTTCTGACTTCGGTGGTTTTTCACACTGCGGAATTGGGGACTTTTCATTCCGGGGTATC
                      ____________________________________________________________
consensus CCTTCTGACTTCGGTGGTTTTTCACACTGCGGAATTGGGGACTTTTCATTCCGGGGTATC
 
. : . : . : . : . : . :
JMFF028N12- CGTCGAGATCAACATTTCCTTTGTCGATGTTGCTGTTCTTGGTGAGGAAATCGAGATAGA
rJMFF028N12+ CGTCGAGATCAACATTTCCTTTGTCGATGTTGCTGTTCTTGGTGAGGAAATCGAGATAGA
                      ____________________________________________________________
consensus CGTCGAGATCAACATTTCCTTTGTCGATGTTGCTGTTCTTGGTGAGGAAATCGAGATAGA
 
. : . : . : . : . : . :
JMFF028N12- GTCGAAAGTATTACGCGTTGGGAAGATGATATGTGTTGCGAGTGTGGAATTG
rJMFF028N12+ GTCGAAAGTATTACGCGTTGGGAAGATGATATGTGTTGCGAGTGTGGAATTGAGGAAGAA
                      ____________________________________________________________
consensus GTCGAAAGTATTACGCGTTGGGAAGATGATATGTGTTGCGAGTGTGGAATTGAGGAAGAA
 
. : . : . : . : . : . :
rJMFF028N12+ AGAGACGGGGAAGATAATTGCTCAAGGACGTCACACTAAATACTTGGGCATTCGCAGTAG
                      ____________________________________________________________
consensus AGAGACGGGGAAGATAATTGCTCAAGGACGTCACACTAAATACTTGGGCATTCGCAGTAG
 
. : . : . : . : . : . :
rJMFF028N12+ GGTTTGAACTTGTTTGACTATTTGCTTTCTCCATAACTCCATTTTCCCCTATTTTTAGCT
                      ____________________________________________________________
consensus GGTTTGAACTTGTTTGACTATTTGCTTTCTCCATAACTCCATTTTCCCCTATTTTTAGCT
 
. : . : . : . : . : . :
rJMFF028N12+ GTTTAATTTGGGTGAACTGGGCAAAAAGAGCCTGTGGTGTTGGAGAAATATATATACAGA
                      ____________________________________________________________
consensus GTTTAATTTGGGTGAACTGGGCAAAAAGAGCCTGTGGTGTTGGAGAAATATATATACAGA
 
. : . : . : . : . : . :
rJMFF028N12+ AAAGTGGGAATGAAAATAGTAAGACCTGTTTAATTATGATGAAACTTGTTAATATGCTCT
                      ____________________________________________________________
consensus AAAGTGGGAATGAAAATAGTAAGACCTGTTTAATTATGATGAAACTTGTTAATATGCTCT
 
. : . : . : . : . : . :
rJMFF028N12+ TTATGCGAGCACTCTATTCACTCCTATAAGGAGGCATTGATGAACAGTGAANAAAGANGA
                      ____________________________________________________________
consensus TTATGCGAGCACTCTATTCACTCCTATAAGGAGGCATTGATGAACAGTGAANAAAGANGA