| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027K17 | Sequence | 721 | 008242 (5) | emb|CBI34507.3| | 1e-35 | unnamed protein product [Vitis vinifera] | |||||
| JMFF029D16 | Sequence | 577 | 008242 (5) | emb|CBI34507.3| | 1e-28 | unnamed protein product [Vitis vinifera] | 665 | 004204 (6) | ref|XP_009764745.1| | 1e-63 | PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris] |
| JMFF035K17 | Sequence | 509 | 004204 (6) | ref|XP_009764745.1| | 2e-61 | PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris] | 236 | 008242 (5) | |||
| JMFF048H24 | Sequence | 427 | 008242 (5) | emb|CBI34507.3| | 5e-29 | unnamed protein product [Vitis vinifera] | 395 | 004204 (6) | ref|XP_006343832.1| | 5e-22 | PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform |
| JMSF009J08 | Sequence | 267 | 008242 (5) | gb|KDP25281.1| | 9e-15 | hypothetical protein JCGZ_20437 [Jatropha curcas] | 758 | 004204 (6) | ref|XP_006343832.1| | 5e-65 | PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform |
This contig is upended
. : . : . : . : . : . :
rJMFF027K17+ TG
____________________________________________________________
consensus TG
. : . : . : . : . : . :
JMFF029D16+ CGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
rJMFF027K17+ GCCGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
____________________________________________________________
consensus GCCGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
. : . : . : . : . : . :
JMFF029D16+ GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
rJMFF027K17+ GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
____________________________________________________________
consensus GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
. : . : . : . : . : . :
JMFF029D16+ GGCTTAGGCGGCGAGTGCTTTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
JMFF048H24+ CTGGCGGCGGAGTAACGGCGTCTTT
rJMFF027K17+ GGCTTAGGCGGCGAGTGC-TTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
____________________________________________________________
consensus GGCTTAGGCGGCGAGTGCTTTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
. : . : . : . : . : . :
JMFF029D16+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
JMFF048H24+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
rJMFF027K17+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
____________________________________________________________
consensus GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
. : . : . : . : . : . :
JMFF029D16+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
JMSF009J08+ CAATGGAGTTGAGCTTCTCAAG
JMFF048H24+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
rJMFF027K17+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
____________________________________________________________
consensus GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
. : . : . : . : . : . :
JMFF029D16+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
JMSF009J08+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
JMFF048H24+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
rJMFF027K17+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
____________________________________________________________
consensus CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
. : . : . : . : . : . :
JMFF029D16+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
JMSF009J08+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
JMFF048H24+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
rJMFF027K17+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
____________________________________________________________
consensus ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
. : . : . : . : . : . :
JMFF029D16+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
JMSF009J08+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
JMFF048H24+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
rJMFF035K17+ GC
rJMFF027K17+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
____________________________________________________________
consensus GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
. : . : . : . : . : . :
JMFF029D16+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
JMSF009J08+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
JMFF048H24+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
rJMFF035K17+ CTTGATTATCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCNTGGTTTTCCGACGAGGCT
rJMFF027K17+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
____________________________________________________________
consensus CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
. : . : . : . : . : . :
JMFF029D16+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATAT
JMSF009J08+ TGTT
JMFF048H24+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATAT
rJMFF035K17+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
rJMFF027K17+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
____________________________________________________________
consensus TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
. : . : . : . : . : . :
rJMFF035K17+ TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
rJMFF027K17+ TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
____________________________________________________________
consensus TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
. : . : . : . : . : . :
rJMFF035K17+ CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGA
rJMFF027K17+ CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGATAAACCAT
____________________________________________________________
consensus CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGATAAACCAT