Contig 008241:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF017F03-                GAGTCATGACATGTTTTCGGTGGATCAGCAGATGGCGTTTCCCGGCCAAGTAGGC
rJMSF017F03+               GAGTCATGACATGTTTTCGGTGGATCAGCAGATGGCGTTTCCCGGCCAAGTAGGC
                      ____________________________________________________________
consensus                  GAGTCATGACATGTTTTCGGTGGATCAGCAGATGGCGTTTCCCGGCCAAGTAGGC
 
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JMSF017F03-           GGTGGCGGTCGACCTTCTTCCATAGAGACTGGCACCAAGCTCTATATATCCAACCTAGAG
rJMSF017F03+          GGTGGCGGTCGACCTTCTTCCATAGAGACTGGCACCAAGCTCTATATATCCAACCTAGAG
                      ____________________________________________________________
consensus             GGTGGCGGTCGACCTTCTTCCATAGAGACTGGCACCAAGCTCTATATATCCAACCTAGAG
 
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JMSF017F03-           TATAGCGTCTCTAACGAGGATGTCAAGGAACTCTTCTCAGAGGTTGGTGATCTGAAATCC
rJMSF017F03+          TATAGCGTCTCTAACGAGGATGTCAAGGAACTCTTCTCAGAGGTTGGTGATCTGAAATCC
                      ____________________________________________________________
consensus             TATAGCGTCTCTAACGAGGATGTCAAGGAACTCTTCTCAGAGGTTGGTGATCTGAAATCC
 
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JMSF017F03-           TTTGCAATTCATTATGATAGGAGTGGAAGATCAAAGGGAACAGCAGAAGTTGTCTTCTCA
rJMSF017F03+          TTTGCAATTCATTATGATAGGAGTGGAAGATCAAAGGGAACAGCAGAAGTTGTCTTCTCA
                      ____________________________________________________________
consensus             TTTGCAATTCATTATGATAGGAGTGGAAGATCAAAGGGAACAGCAGAAGTTGTCTTCTCA
 
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rJMSF017F03+          CGTCGACAAGATGCTTTAGCAGCTGTGAAAAGGTATAACAATGTTCAACTCGATGGCAAG
                      ____________________________________________________________
consensus             CGTCGACAAGATGCTTTAGCAGCTGTGAAAAGGTATAACAATGTTCAACTCGATGGCAAG
 
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rJMSF017F03+          GCAATGCATATAGAGATTGTAGGCACAAACATTGCAGCCCCTCCTGCTCCATCTTCCTAC
                      ____________________________________________________________
consensus             GCAATGCATATAGAGATTGTAGGCACAAACATTGCAGCCCCTCCTGCTCCATCTTCCTAC
 
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rJMSF017F03+          AGTGGTGGTGCCTATGGAGATTTCAATGGAATTCCTAGAAGTGGGCAAGGGCGAGGTGGA
rJMFF027F10+                            GATTTCNATGGAATTCTTAGAAGTGNGCAAGNNCGAGNNGGA
                      ____________________________________________________________
consensus             AGTGGTGGTGCCTATGGAGATTTCAATGGAATTCTTAGAAGTGGGCAAGGGCGAGGTGGA
 
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rJMSF017F03+          GGTGGAGGTGGAGTATTCGGAAGGCCACGTGGTGGCAATAGGGGAAGAGGCCGTGGTTTC
rJMFF027F10+          GGTGGAGNTGGAGTATTCGGAAGNCCACGTGGTGGCAATAGGGGAAGAGNCCGTGGTTTC
                      ____________________________________________________________
consensus             GGTGGAGGTGGAGTATTCGGAAGGCCACGTGGTGGCAATAGGGGAAGAGGCCGTGGTTTC
 
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rJMSF017F03+          CGAGGAGGAGGAAGAGGAGGTGGAGGAGGTCGAGGACAAGGTAGAGGGCGTGGAGAGAAA
rJMFF027F10+          CGAGGAGGAGGAAGAGGAGGTGGAGGAGGTCGAGGACAAGGTAGAGGGCGTGGAGAGAAA
                      ____________________________________________________________
consensus             CGAGGAGGAGGAAGAGGAGGTGGAGGAGGTCGAGGACAAGGTAGAGGGCGTGGAGAGAAA
 
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rJMSF017F03+          GTAGTATCTGCAGAAGATCTTGATGCTGACTTGGAGAAGTACCACTCGGAAGCAATGCAA
rJMFF027F10+          GTAGTATCTGCAGAAGATCTTGATGCTGACTTGGAGAAGTACCACTCGGAAGCAATGCAA
                      ____________________________________________________________
consensus             GTAGTATCTGCAGAAGATCTTGATGCTGACTTGGAGAAGTACCACTCGGAAGCAATGCAA
 
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rJMSF017F03+          GAAAATTAATGAATTCCTCCTCTATCATTGTTTTGTTTTGTCTACACTTGCTGTAACTAT
rJMFF027F10+          GAAAATTAATGAATTCCTCCTCTATCANTGTTTTGTTTCGTCTACACTTGCTGTAACTAT
                      ____________________________________________________________
consensus             GAAAATTAATGAATTCCTCCTCTATCATTGTTTTGTTTTGTCTACACTTGCTGTAACTAT
 
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rJMSF017F03+          TCTGCGAATTTATGCTTTGCTTGATGATTACACAGACAACTCTCTTGTATGTTTAGCCTC
rJMFF027F10+          TNTGCGAATTTATGCTTTGCTTGATGATTACACAGACAACTCTCTNGTATGTTTAGCCNC
                      ____________________________________________________________
consensus             TCTGCGAATTTATGCTTTGCTTGATGATTACACAGACAACTCTCTTGTATGTTTAGCCTC
 
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rJMSF017F03+          CTAGAATTACCATGGAAGTAATGAGTTTGTAACACATTTCTTACT               
rJMFF027F10+          CTAGAATTA-CATGGAAGTAATGAGTNNGTAACACATTTCNTACTNACTCCGTTTAAATC
                      ____________________________________________________________
consensus             CTAGAATTACCATGGAAGTAATGAGTTTGTAACACATTTCTTACTNACTCCGTTTAAATC