Contig 008235:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018H06Sequence523005903 (8)ref|XP_004242940.2|152PREDICTED: uncharacterized protein LOC101252095 [Solanum lycopersicum]602008235 (4)ref|XP_006341271.1|174PREDICTED: uncharacterized protein LOC102605018 [Solanum tuberosum]
JMFF025N17Sequence751008235 (4)ref|XP_006341271.1|247PREDICTED: uncharacterized protein LOC102605018 [Solanum tuberosum]
JMFF028L06Sequence325005903 (8)ref|XP_009766667.1|62.4PREDICTED: uncharacterized protein LOC104217988 [Nicotiana sylvestris]421008235 (4)emb|CDP03295.1|7e-35unnamed protein product [Coffea canephora]
JMFF040L04Sequence524005903 (8)ref|XP_004242940.2|153PREDICTED: uncharacterized protein LOC101252095 [Solanum lycopersicum]662008235 (4)ref|XP_006341271.1|198PREDICTED: uncharacterized protein LOC102605018 [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF025N17+                                      ACTGAGTTGACACCAACAAAAATTGCCAGAAT
                      ____________________________________________________________
consensus                                         ACTGAGTTGACACCAACAAAAATTGCCAGAAT
 
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rJMFF040L04+                                                  TTAGTAGCGGGAAGTAACAC
rJMFF025N17+          GTACCATTCCACTTCTGCGGTTTTGCCCGACGCTAAGATCTTAGTAGCGGGAAGTAACAC
                      ____________________________________________________________
consensus             GTACCATTCCACTTCTGCGGTTTTGCCCGACGCTAAGATCTTAGTAGCGGGAAGTAACAC
 
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rJMFF018H06+                      CGATATGAAAGCCAAATACCCAACCGACATGCGCGTCGAGAAATTNTC
rJMFF040L04+          CCACGATTCCTACGATATGAAAGCCAAATACCCAACCGACATGCGCGTNGAGAAATTCTC
rJMFF025N17+          CCACGTTTCCTACGATATGAAAGCCAAATACCCAACCGACATGCGCGTCGAGAAATTCTC
                      ____________________________________________________________
consensus             CCACGTTTCCTACGATATGAAAGCCAAATACCCAACCGACATGCGCGTCGAGAAATTCTC
 
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rJMFF018H06+          GCCGCCGTACTTAGCCCCCGCACTGCAAAAGTTTCGGCCGCAGATCGTGGAGAAGCTTTC
rJMFF028L06+                                             GGCCGCAGATCGTGGAGAAGCTTTC
rJMFF040L04+          GCCGCCGTACTTAGCCCCCGCACTGCAAAAGTTTCGGCCGCAGATCGTGGAGAAGCTTTC
rJMFF025N17+          GCCGCCGTACTTAGCCCCCACATTGCAAAAGCTCCGGCCGCAGATTGTGGAGAACCTTTC
                      ____________________________________________________________
consensus             GCCGCCGTACTTAGCCCCCGCACTGCAAAAGTTTCGGCCGCAGATCGTGGAGAAGCTTTC
 
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rJMFF018H06+          CCAAACGGAATTGGTTTATGGAAAGAATTTCAATATCCATTTCAAGCTAGATGATGCGGC
rJMFF028L06+          CCAAACGGAATTGGTTTATGGAAAGAATTTCAATATCCATTTCAAGNTAGATGATGCGGN
rJMFF040L04+          CCAAACGGAATTGGTTTATGGAAAGAATTTCAATATCCATTTCAAGCTAGATGATGCGGC
rJMFF025N17+          CCAAAAGGAATTGGTTTATGGAAAGAATTTCAATATCCATTTCAAGCTAGATGATGCTGC
                      ____________________________________________________________
consensus             CCAAACGGAATTGGTTTATGGAAAGAATTTCAATATCCATTTCAAGCTAGATGATGCGGC
 
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rJMFF018H06+          GGACATGTNTAGTATTAAGGTTACCATGTATCCGCCGCCTTTCACCACTCACGGGTACTT
rJMFF028L06+          GGACATGTCTAGTATTAAGGTTACCATGTATCCGCCGCCTTTCACCACTCACGGGTACTN
rJMFF040L04+          GGACATGTNTAGTATTAAGGTTACCATGTATCCGCCGCCTTTCACCACTCACGGGTACTN
rJMFF025N17+          GGACATGTCTAGTATTAAGGTTACCATGTATCCGCCGCCTTTCACCACTCACGGGTACTC
                      ____________________________________________________________
consensus             GGACATGTCTAGTATTAAGGTTACCATGTATCCGCCGCCTTTCACCACTCACGGGTACTT
 
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rJMFF018H06+          TGAGGGCCAAAGGATGCTGATTTTGGGACTCACCTNTGTGGCCAAGGATACCATNTCCGC
rJMFF028L06+          TGAGGGCCAAAGGATGNTGATTTTGGGACTCACCTCTGTGGCCAAGGATACCATCTCCGC
rJMFF040L04+          TGAGGGCCAAAGGATGCTGATTTTGGGACTCACCTCTGTGGCCAAGGATACCATNTCCGC
rJMFF025N17+          TGAGGGCCAAAGGATGCTGATTTTGGGACTCACCTCTGTGGCCAAGGACACCATCTCTGC
                      ____________________________________________________________
consensus             TGAGGGCCAAAGGATGCTGATTTTGGGACTCACCTCTGTGGCCAAGGATACCATCTCCGC
 
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rJMFF018H06+          CGTGGCGCCGTCCTTTGGCAAGCTTGCACCNCCAGGCTATTACTTGATNTTTGTTGTGCA
rJMFF028L06+          CGTGGCGCCGTCCTCTGGCAAGNTTGCACCACCAGGCTATTACTTGATTTTTGTTGNGCA
rJMFF040L04+          CGTGGCGCCGTCCTNTGGCAAGCTTGCACCACCAGGCTATTACTTGATCTTTGTTGTGCA
rJMFF025N17+          CGTGGCGCCATCCTCTGGCAAGCTTGCACCACCAGGCTATTACTTGATCTTTGTTGTGCA
                      ____________________________________________________________
consensus             CGTGGCGCCGTCCTCTGGCAAGCTTGCACCACCAGGCTATTACTTGATCTTTGTTGTGCA
 
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rJMFF018H06+          CCGTGGCGTACCCAGCAAGGGATTGTGGGTGCATATTAAATAGAACAGAATAGAAGATAC
rJMFF028L06+          CCGTGGCGTACCCAGCAAGGGATTGTGGGTGCATATTAAATAGAACAGAATAGAAGATAC
rJMFF040L04+          CCGTGGCGTACCCAGCAAGGGATTGTGGGTGCATATTAAATAGAACAGAATAGAAGATAC
rJMFF025N17+          CCGTGGCGTACCCAGCAAGGGATTGTGGGTGCATATTAAATAGAACAGAATAGAAGAT-T
                      ____________________________________________________________
consensus             CCGTGGCGTACCCAGCAAGGGATTGTGGGTGCATATTAAATAGAACAGAATAGAAGATAC
 
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rJMFF018H06+          GGGCTCGCTTGTTCAGTGTTGACAGTATTTGGGTGCAATTAGCCTTACATGCTGAT    
rJMFF028L06+          GGGCTCGCTTGTTCAGTGTTGACAGTATTTGGGTGCAATTAGCCTTACATGCTGAT    
rJMFF040L04+          GGGCTCGCTTGTTCAGTGTTGACAGTATTTGGGTGCAATTAGCCTTACATGCTGAT    
rJMFF025N17+          GGGCTCGCTTGTTCAGTGTTGACAGTATTTGGGTGCAATTAGCCCTACATGCTGATCTAT
                      ____________________________________________________________
consensus             GGGCTCGCTTGTTCAGTGTTGACAGTATTTGGGTGCAATTAGCCTTACATGCTGATCTAT
 
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rJMFF025N17+          TTGGGTGCAATTAGCCCTACATGCTGATCGAGTCATTATCGTGATTTATAGTGCAGACGA
                      ____________________________________________________________
consensus             TTGGGTGCAATTAGCCCTACATGCTGATCGAGTCATTATCGTGATTTATAGTGCAGACGA
 
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rJMFF025N17+          ACTACGGTGTGAGGGGTCCCTTAGGGTGGGGAATCCAACCTTCTTGATAGAAGTATAGAA
                      ____________________________________________________________
consensus             ACTACGGTGTGAGGGGTCCCTTAGGGTGGGGAATCCAACCTTCTTGATAGAAGTATAGAA
 
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rJMFF025N17+          ATGGGCATTGAATTTTTTTATTTTTGTAATCTTGTACAGAGTACCATATAATAATATATA
                      ____________________________________________________________
consensus             ATGGGCATTGAATTTTTTTATTTTTGTAATCTTGTACAGAGTACCATATAATAATATATA