| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025M22 | Sequence | 575 | 008234 (4) | ref|XP_009603375.1| | 1e-90 | PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis] | 684 | 008234 (4) | ref|XP_009758703.1| | 1e-101 | PREDICTED: nudix hydrolase 26, chloroplastic [Nicotiana sylvestris] |
| JMSF021J14 | Sequence | 586 | 008234 (4) | ref|XP_009603375.1| | 1e-78 | PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis] | 718 | 008234 (4) | ref|XP_009603375.1| | 3e-103 | PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF021J14- GGGGCAAGTATACTGTATACCT
____________________________________________________________
consensus GGGGCAAGTATACTGTATACCT
. : . : . : . : . : . :
JMSF021J14- CGGCGCTTCTTGATAGCAAAACAGTAATTCTAGAGAAGTGCGCAAGGTATATCGAGTTGG
JMFF025M22- GCGCAAGGTATATCGAGTTGG
____________________________________________________________
consensus CGGCGCTTCTTGATAGCAAAACAGTAATTCTAGAGAAGTGCGCAAGGTATATCGAGTTGG
. : . : . : . : . : . :
JMSF021J14- GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
JMFF025M22- GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
____________________________________________________________
consensus GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
. : . : . : . : . : . :
JMSF021J14- TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
JMFF025M22- TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
rJMSF021J14+ TCCAAATTTACAG
____________________________________________________________
consensus TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
. : . : . : . : . : . :
JMSF021J14- CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
JMFF025M22- CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
rJMSF021J14+ CGNTGCCANTCCTCCGCCATAAACGCTCTCTACCTCCNTTCGCGTCACTCTCCATGGAAA
rJMFF025M22+ TTCGCGTCACTCTCCATGGAAA
____________________________________________________________
consensus CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
. : . : . : . : . : . :
JMSF021J14- CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
JMFF025M22- CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
rJMSF021J14+ CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
rJMFF025M22+ CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
____________________________________________________________
consensus CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
. : . : . : . : . : . :
JMSF021J14- AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
JMFF025M22- AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
rJMSF021J14+ AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
rJMFF025M22+ AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
____________________________________________________________
consensus AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
. : . : . : . : . : . :
JMSF021J14- TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
JMFF025M22- TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
rJMSF021J14+ TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
rJMFF025M22+ TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
____________________________________________________________
consensus TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
. : . : . : . : . : . :
JMSF021J14- TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
JMFF025M22- TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
rJMSF021J14+ TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
rJMFF025M22+ TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
____________________________________________________________
consensus TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
. : . : . : . : . : . :
JMSF021J14- ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
JMFF025M22- ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
rJMSF021J14+ ATGTCAGGGAAAAANTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
rJMFF025M22+ ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
____________________________________________________________
consensus ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
. : . : . : . : . : . :
JMSF021J14- GGTTCCTCTTTAAGTTTACCGGAA
JMFF025M22- GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
rJMSF021J14+ GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
rJMFF025M22+ GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
____________________________________________________________
consensus GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
. : . : . : . : . : . :
JMFF025M22- AGAAGCCTGAATTC
rJMSF021J14+ AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
rJMFF025M22+ AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
____________________________________________________________
consensus AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
. : . : . : . : . : . :
rJMSF021J14+ TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
rJMFF025M22+ TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
____________________________________________________________
consensus TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
. : . : . : . : . : . :
rJMSF021J14+ AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
rJMFF025M22+ AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
____________________________________________________________
consensus AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
. : . : . : . : . : . :
rJMSF021J14+ GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
rJMFF025M22+ GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
____________________________________________________________
consensus GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
. : . : . : . : . : . :
rJMSF021J14+ ATAAGTGNTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTG
rJMFF025M22+ ATAAGTGTTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTGTATTTAATCAAGACT
____________________________________________________________
consensus ATAAGTGTTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTGTATTTAATCAAGACT