Contig 008229:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023D15Sequence471008229 (5)ref|XP_004230850.1|142PREDICTED: uncharacterized protein LOC101261073 [Solanum lycopersicum]543008229 (5)ref|XP_009771806.1|94.0PREDICTED: uncharacterized protein LOC104222284 [Nicotiana sylvestris]
JMFF024H09Sequence471008229 (5)ref|XP_004230850.1|142PREDICTED: uncharacterized protein LOC101261073 [Solanum lycopersicum]556008229 (5)ref|XP_004230850.1|100PREDICTED: uncharacterized protein LOC101261073 [Solanum lycopersicum]
JMFN008D13Sequence546008229 (5)ref|XP_004230850.1|66.6PREDICTED: uncharacterized protein LOC101261073 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF023D15-                  ATTTTATAGAAATCTGATTTATTTATTTATTATTATCTTTTCACTACATCTT
                      ____________________________________________________________
consensus                     ATTTTATAGAAATCTGATTTATTTATTTATTATTATCTTTTCACTACATCTT
 
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rJMFF023D15-          CTTCTTAATGAAAAAAAAAAATAGTTGAAAATTAAAATTAAAATTAATTCATTTATAATT
JMFN008D13+                                            AAAATTAAAATTAACTCATTTATAATT
rJMFF024H09-                                                    ATTAATTCATTTATAATT
                      ____________________________________________________________
consensus             CTTCTTAATGAAAAAAAAAAATAGTTGAAAATTAAAATTAAAATTAATTCATTTATAATT
 
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rJMFF023D15-          TATCAATATTAAAGCTCAACTCTTTTGTTACAGTAAAAGTCCACTCGGTTAATGTTACCA
JMFN008D13+           TATCAATATTAAAGCTCAACTCTTTTGTTACAGTAAAAGTCCACTCGGTTAATGTTACCT
rJMFF024H09-          TATCAATATTAAAGCTCAACTCTTTTGTTACAGTAAAAGTCCACTCGGTTAATGTTACCA
                      ____________________________________________________________
consensus             TATCAATATTAAAGCTCAACTCTTTTGTTACAGTAAAAGTCCACTCGGTTAATGTTACCA
 
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rJMFF023D15-          CAGCCACCGGAAANTCTCTCATCGAAANAACGTCGCCGGANAATCGCTCCGGCCGCCGGA
JMFN008D13+           CAGCCTCCGGAAACTCTCTCATCGAAAGAACGTCGCCGGAGAATCGCTCCGGCCGCCGGA
JMFF023D15+                 CCGGAAACTCTCTCATCGAAAGAACGTCGCCGGAGAATCGCTCCGGCCGCCGGA
JMFF024H09+                 CCGGAAACTCTCTCATCGAAAGAACGTCGCCGGAGAATCGCTCCGGCCGCCGGA
rJMFF024H09-          CAGCCACCGGAAACTCTCTCATCGAAAGAACGTCGCCGGAGAATCGCTCCGGCCGCCGGA
                      ____________________________________________________________
consensus             CAGCCACCGGAAACTCTCTCATCGAAAGAACGTCGCCGGAGAATCGCTCCGGCCGCCGGA
 
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rJMFF023D15-          NAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCCTGAAGT
JMFN008D13+           GAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCTTGAAGT
JMFF023D15+           GAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCCTGAAGT
JMFF024H09+           GAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCCTGAAGT
rJMFF024H09-          GAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCCTGAAGT
                      ____________________________________________________________
consensus             GAGTAGTAATCATTGAGGGCGGCGCTAGCTTTGATGGCCAGCGCACACATATCCTGAAGT
 
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rJMFF023D15-          GAAAGCGGCGCGTGCGACATAAAAACCGGGAGGANAAAGTAAAGCTGTCCNAGCTGCAAG
JMFN008D13+           GAAAACGGCGCGTGCGACATAGAAACCGGGAGTAGAAAGTAAAGCTGTCCCATCTGCAAG
JMFF023D15+           GAAAGCGGCGCGTGCGACATAGAAACCGGGAGGAGAAAGTAAAGCTGTCCGAGCTGCAAG
JMFF024H09+           GAAAGCGGCGCGTGCGACATAGAAACCGGGAGGAGAAAGTAAAGCTGTCCGAGCTGCAAG
rJMFF024H09-          GAAAGCGGCGCGTGCGACATAGAAACCGGGAGGAGAAAGTAAAGCTGTCCGAGCTGCAAG
                      ____________________________________________________________
consensus             GAAAGCGGCGCGTGCGACATAGAAACCGGGAGGAGAAAGTAAAGCTGTCCGAGCTGCAAG
 
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rJMFF023D15-          TCTTCGTCTTC-GGCAACCTGCGGCATTGCAAAGTC-NACGTTCATCGCTTCGGAGTTGG
JMFN008D13+           TCTTCGTCTTCAGGCAACATACGGCATTGCAGAGTCAGACGTTCATCGCTTCGGAGTTGG
JMFF023D15+           TCTTCGTCTTC-GGCAACCTGCGGCATTGCAGAGTC-GACGTTCATCGCTTCGGAGTTGG
JMFF024H09+           TCTTCGTCTTC-GGCAACCTGCGGCATTGCAGAGTC-GACGTTCATCGCTTCGGAGTTGG
rJMFF024H09-          TCTTCGTCTTC-GGCAACCTGCGGCATTGCAGAGTC-GACGTTCATCGCTTCGGAGTTGG
                      ____________________________________________________________
consensus             TCTTCGTCTTC-GGCAACCTGCGGCATTGCAGAGTC-GACGTTCATCGCTTCGGAGTTGG
 
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rJMFF023D15-          AAAGGAAGCAGTCCGGGTTGTCGGANANAAACGTCGGNGGCCTTCACCGGCCGCCGGAAN
JMFN008D13+           AAAGGAAGCAGTCCGGGTTGTCGGAGAC-AACGTCGCCGGCCTTCACCGGCCGCCGGAAC
JMFF023D15+           AAAGGAAGCAGTCCGGGTTGTCGGAGAG-AACGTCGGCGGCCTTCACCGGCCGCCGGAAC
JMFF024H09+           AAAGGAAGCAGTCCGGGTTGTCGGAGAG-AACGTCGGCGGCCTTCACCGGCCGCCGGAAC
rJMFF024H09-          AAAGGAAGCAGTCCGGGTTGTCGGAGAGAAACGTCGGCGGCCTTCACCGGCCGCCGGAAC
                      ____________________________________________________________
consensus             AAAGGAAGCAGTCCGGGTTGTCGGAGAG-AACGTCGGCGGCCTTCACCGGCCGCCGGAAC
 
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rJMFF023D15-          TCCTGCAGCGCACCGTCGTTCATATTCNCCACCATGGCCGCCGCCGGCGNGCTCATTATT
JMFN008D13+           TCATGCAGCGCACCGTCGTTCATATTCCCCTCCATGGCCGCCGCCGGCGTGCTCATTATT
JMFF023D15+           TCCTGCAGCGCACCGTCGTTCATATTCACCACCATGGCCGCCGCCGGCGTGCTCATTATT
JMFF024H09+           TCCTGCAGCGCACCGTCGTTCATATTCACCACCATGGCCGCCGCCGGCGTGCTCATTATT
rJMFF024H09-          TCCTGCAGCGCACCGTCGTTCATATTCACCACCATGGCCGCCGCCGGCGTGCTCATTATT
                      ____________________________________________________________
consensus             TCCTGCAGCGCACCGTCGTTCATATTCACCACCATGGCCGCCGCCGGCGTGCTCATTATT
 
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rJMFF023D15-          AATNTCCCGCCTC                                               
JMFN008D13+           AATCTTCCGCCTCGCCGGCTCTCCGTGGCGTGAGCGGATGCGCAAATGCCCATTCTCCGA
JMFF023D15+           AATCTCCCGCCTCGCCGGCTCTCCGTCGCGTGAGCGGATGCGCAAATGCCCATTTTCCGA
JMFF024H09+           AATCTCCCGCCTCGCCGGCTCTCCGTCGCGTGAGCGGATGCGCAAATGCCCATTTTCCGA
rJMFF024H09-          AATCTCCCGCCTCGCCGGCTCTCCGTCGCGTGAGCGGATGCGCAAATGCCCATTTTCCGA
                      ____________________________________________________________
consensus             AATCTCCCGCCTCGCCGGCTCTCCGTCGCGTGAGCGGATGCGCAAATGCCCATTTTCCGA
 
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JMFN008D13+           TTCTCGGAGGGGGGATAGA                                         
JMFF023D15+           TTCTCGGAGGGGGGATAGAGAATTGTGTATTGTTTGAGTGAATTGAATGCAAGTGATGAT
JMFF024H09+           TTCTCGGAGGGGGGATAGAGAATTGTGTATTGTTTGAGTGAATTGAATGCAAGTGATGAT
rJMFF024H09-          TTCTCGGAGGGGGGATAGAGAATTGTGTATTGTTTGAGTGAATTGAATGCAAGTGATGAT
                      ____________________________________________________________
consensus             TTCTCGGAGGGGGGATAGAGAATTGTGTATTGTTTGAGTGAATTGAATGCAAGTGATGAT