Contig 008228:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF023O20-                                           AGAGATTAAACTTTCAGTTCTCGCTAAA
JMFF018C13-                                                              CTCGCTAAA
                      ____________________________________________________________
consensus                                             AGAGATTAAACTTTCAGTTCTCGCTAAA
 
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JMFF023O20-           TTTTATTGAATAATCACTCCCGCGGTCGGATCTCGGGCGCGATCATCATTCTCCGGCGGC
JMFF018C13-           TTTTATTGAATAATCACTCCCGCGGTCGGATCTCGGGCGCGATCATCATTCTCCGGCGGC
                      ____________________________________________________________
consensus             TTTTATTGAATAATCACTCCCGCGGTCGGATCTCGGGCGCGATCATCATTCTCCGGCGGC
 
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JMFF023O20-           CCTCTGACGGCAATCGTATTTCCCACATATATTCCTATTCACCTTAAGAAATGGCTGGGC
JMFF018C13-           CCTCTGACGGCAATCGTATTTCCCACATATATTCCTATTCACCTTAAGAAATGGCTGGGC
                      ____________________________________________________________
consensus             CCTCTGACGGCAATCGTATTTCCCACATATATTCCTATTCACCTTAAGAAATGGCTGGGC
 
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JMFF023O20-           AAAACCAACGCTTAAATGTGGTTCCTACTGTCACAATGCTTGGTGTCGTGAAAGCTCGCC
JMFF018C13-           AAAACCAACGCTTAAATGTGGTTCCTACTGTCACAATGCTTGGTGTCGTGAAAGCTCGCC
                      ____________________________________________________________
consensus             AAAACCAACGCTTAAATGTGGTTCCTACTGTCACAATGCTTGGTGTCGTGAAAGCTCGCC
 
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JMFF023O20-           TTGTTGGTGCCACAAGAGGCCATGCTTTGCTTAAGAAGAAAAGTGATGCTCTCACCGTGC
JMFF018C13-           TTGTTGGTGCCACAAGAGGCCATGCTTTGCTTAAGAAGAAAAGTGATGCTCTCACCGTGC
                      ____________________________________________________________
consensus             TTGTTGGTGCCACAAGAGGCCATGCTTTGCTTAAGAAGAAAAGTGATGCTCTCACCGTGC
 
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JMFF023O20-           AGTTCAGACAGATTCTCAAGAAAATTGTGTCAACAAAAGAATCGATGGGAGAGGTCATGA
JMFF018C13-           AGTTCAGACAGATTCTCAAGAAAATTGTGTCAACAAAAGAATCGATGGGAGAGGTCATGA
                      ____________________________________________________________
consensus             AGTTCAGACAGATTCTCAAGAAAATTGTGTCAACAAAAGAATCGATGGGAGAGGTCATGA
 
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JMFF023O20-           AAAGTTCCTCCTTTGCTCTGACAGAGGTCAAGTATTGTGCTGGTGAGAACATTAAGCATA
JMFF018C13-           AAAGTTCCTCCTTTGCTCTGACAGAGTTCAAGTATTGTGCTGGTGAGAACATTAAGCATA
rJMFF018C13+                                                               AAGCATA
rJMFF023O20+                                                               AAGCATA
                      ____________________________________________________________
consensus             AAAGTTCCTCCTTTGCTCTGACAGAGTTCAAGTATTGTGCTGGTGAGAACATTAAGCATA
 
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JMFF023O20-           TTGTGCTTGAAAATGTTCAGAGCGCAACACTTAAAGTTCGATCACGCCAAGAAAATATTG
JMFF018C13-           TTGTGCTTGAAAATGTTCAGAGCGCAACACTTAAAGTTCGATCACGCCAAGAAAATATTG
rJMFF018C13+          TTGTGCTTGAAAATGTTCAGAGCGCAACACTTAAAGTTCGATCACGCCAAGAAAATATTG
rJMFF023O20+          TTGTGCTTGAAAATGTTCAGAGCGCAACACTTAAAGTTCGATCACGCCAAGAAAATATTG
                      ____________________________________________________________
consensus             TTGTGCTTGAAAATGTTCAGAGCGCAACACTTAAAGTTCGATCACGCCAAGAAAATATTG
 
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JMFF023O20-           CTGGTGTTAAGCTCCCCAAGTTTGATTATTTCTCTGAAGGAGAGACAAAGAATGACTTGA
JMFF018C13-           CTGGTGTTAAGCTCCCCAAGTTTGATTATTTCTCTGAAGGAGAGACAAAGAATGACTTGA
rJMFF018C13+          CTGGTGTTAAGCTCCCCAAGTTTGATTATTTCTCTGAAGGAGAGACAAAGAATGACTTGA
rJMFF023O20+          CTGGTGTTAAGCTCCCCAAGTTTGATTATTTCTCTGAAGGAGAGACAAAGAATGACTTGA
                      ____________________________________________________________
consensus             CTGGTGTTAAGCTCCCCAAGTTTGATTATTTCTCTGAAGGAGAGACAAAGAATGACTTGA
 
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JMFF023O20-           CTGGATTAGCTAGAG                                             
JMFF018C13-           CTGGATTAGCTAGAGGTGGGCAACAGGTACAAGCATGCCGTGCTGCCTATGTGAAAGCAA
rJMFF018C13+          CTGGATTAGCTAGAGGTGGGCAACAGGTACAAGCATGCCGTGCTGCCTATGTGAAAGCAA
rJMFF023O20+          CTGGATTAGCTAGAGGTGGGCAACAGGTACAAGCATGCCGTGCTGCCTATGTGAAAGCAA
                      ____________________________________________________________
consensus             CTGGATTAGCTAGAGGTGGGCAACAGGTACAAGCATGCCGTGCTGCCTATGTGAAAGCAA
 
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JMFF018C13-           TCGAGCTCCTTGTTGAGCTTGCTTCCCTGCAAACATCATTTCTCACTCTTGACGAGGCTA
rJMFF018C13+          TCGAGCTCCTTGTTGAGCTTGCTTCCCTGCAAACATCATTTCTCACTCTTGACGAGGCTA
rJMFF023O20+          TCGAGCTCCTTGTTGAGCTTGCTTCCCTGCAAACATCATTTCTCACTCTTGACGAGGCTA
                      ____________________________________________________________
consensus             TCGAGCTCCTTGTTGAGCTTGCTTCCCTGCAAACATCATTTCTCACTCTTGACGAGGCTA
 
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JMFF018C13-           TCAAGA                                                      
rJMFF018C13+          TCAAGACCACAAACCGCAGGGTCAATGCACTTGAGAACGTGGTGAAACCAAGGCTAGAGA
rJMFF023O20+          TCAAGACCACAAACCGCAGGGTCAATGCACTTGAGAGCGTGGTGAAACCAAGGCTAGAGA
                      ____________________________________________________________
consensus             TCAAGACCACAAACCGCAGGGTCAATGCACTTGAGAGCGTGGTGAAACCAAGGCTAGAGA
 
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rJMFF018C13+          ACACAATAACCTACATCAAGGGAGAACTGGATGAGTTGGAGCGAGAGGACTTCTTTAGGC
rJMFF023O20+          ACACAATAACCTACATCAAGGGAGAACTGGATGAGTTGGAGCGAGAGGACTTCTTTAGGC
                      ____________________________________________________________
consensus             ACACAATAACCTACATCAAGGGAGAACTGGATGAGTTGGAGCGAGAGGACTTCTTTAGGC
 
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rJMFF018C13+          TGAAGAAGATCCAAGGCTACAAGAAGAGAGAGATAGAGAAACAGAAGGCAGCTGCTAAAC
rJMFF023O20+          TGAAGAAGATCCAAGGCTACAAGAAGAGAGAGATAGAGAAACAGAAGGCAGCTGCTAAAC
                      ____________________________________________________________
consensus             TGAAGAAGATCCAAGGCTACAAGAAGAGAGAGATAGAGAAACAGAAGGCAGCTGCTAAAC
 
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rJMFF018C13+          TATTTGCAGACGAGAAGGTTGCTGAAGAAATTTCTTTGAGGAAAGGTATTTCACTTGGCG
rJMFF023O20+          TATTTGCAGACGAGAAGGTTGCTGAAGAAATTTCTTTGAGGAAAGGTATTTCACTTGGCG
                      ____________________________________________________________
consensus             TATTTGCAGACGAGAAGGTTGCTGAAGAAATTTCTTTGAGGAAAGGTATTTCACTTGGCG
 
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rJMFF018C13+          CAGCACATAACTTGCTATCTGGTTCACAGAAAGACGAGGACATCATTTTCTGATATGGAT
rJMFF023O20+          CAGCACATAACTTGCTATCTGGTTCACAGAAAGACGAGGACATCATTTTCTGATATGGAT
                      ____________________________________________________________
consensus             CAGCACATAACTTGCTATCTGGTTCACAGAAAGACGAGGACATCATTTTCTGATATGGAT
 
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rJMFF018C13+          GTCAACCTATTTATCTTTATTTAAGCTTTCTGCGTGAGTCTTTCGCATATCTTATCCTCT
rJMFF023O20+          GTCAACCTATTTATCTTTATTTAAGCTTTCTGCGTGAGTCTTTCGCATATCTTATCCTCT
                      ____________________________________________________________
consensus             GTCAACCTATTTATCTTTATTTAAGCTTTCTGCGTGAGTCTTTCGCATATCTTATCCTCT
 
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rJMFF018C13+          GTAATAGGGACGGGTAATACTTCTAGTTCGACAAATCTCATGTTCTGAATAAGAGCTATC
rJMFF023O20+          GTAATAGGGACGGGTAATACTTCTAGTTCGACAAATCTCATGTTCTGAATAAGAGCTATC
                      ____________________________________________________________
consensus             GTAATAGGGACGGGTAATACTTCTAGTTCGACAAATCTCATGTTCTGAATAAGAGCTATC
 
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rJMFF018C13+          TGCAGGCTTGTATTCTTTGAATCATTTCGTAAGCTTTTATCTGTTGGTTGAACAGCTATC
rJMFF023O20+          TGCAGGCTTGTATTCTTTGAATCATTTCGTAAGCTTTTATCTGTTGGTTGAACAGCTATC
                      ____________________________________________________________
consensus             TGCAGGCTTGTATTCTTTGAATCATTTCGTAAGCTTTTATCTGTTGGTTGAACAGCTATC
 
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rJMFF018C13+          TTGTGAATT                                                   
rJMFF023O20+          TTGTGAATTTGAACGAGACTTTTTCCTTCTGCAGTTTGTATAATTTTATGATTCATGATC
                      ____________________________________________________________
consensus             TTGTGAATTTGAACGAGACTTTTTCCTTCTGCAGTTTGTATAATTTTATGATTCATGATC