Contig 008227:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023N17Sequence460008227 (3)ref|XP_009761184.1|60.8PREDICTED: uncharacterized protein LOC104213385 [Nicotiana sylvestris]784008227 (3)ref|XP_009761184.1|80.5PREDICTED: uncharacterized protein LOC104213385 [Nicotiana sylvestris]
JMFF039E07Sequence720008227 (3)ref|XP_009761184.1|85.5PREDICTED: uncharacterized protein LOC104213385 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF023N17- GCAGCGCA
                      ____________________________________________________________
consensus GCAGCGCA
 
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JMFF023N17- ACTCCACCAGTCATGGCGGATTCCGATGAGGGCAGAGAGGATACAATTTCTGAAGTAGTA
                      ____________________________________________________________
consensus ACTCCACCAGTCATGGCGGATTCCGATGAGGGCAGAGAGGATACAATTTCTGAAGTAGTA
 
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JMFF023N17- ACAGAATCGTTACTGGAGAGCGTTTTCGAATTGAAGAGAATCAAGTGTACTCCTTCCATC
                      ____________________________________________________________
consensus ACAGAATCGTTACTGGAGAGCGTTTTCGAATTGAAGAGAATCAAGTGTACTCCTTCCATC
 
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JMFF023N17- TGCGATGCGTCTCCAACAGATACAGATCGGTCATTGGTTGCAATACGAGATTATGCTGCC
                      ____________________________________________________________
consensus TGCGATGCGTCTCCAACAGATACAGATCGGTCATTGGTTGCAATACGAGATTATGCTGCC
 
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JMFF023N17- GATGATTCTCCCCGCAGTTCCCTCGTCTTCCCTCCGGCGAACCACGAGAACCTCCCGGTC
                      ____________________________________________________________
consensus GATGATTCTCCCCGCAGTTCCCTCGTCTTCCCTCCGGCGAACCACGAGAACCTCCCGGTC
 
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JMFF023N17- TCCGTGAATCTCATCGGCGCTTTCAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
rJMFF039E07+ CAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
rJMFF023N17+ ATGG
                      ____________________________________________________________
consensus TCCGTGAATCTCATCGGCGCTTTCAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
 
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JMFF023N17- GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
rJMFF039E07+ GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
rJMFF023N17+ GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
                      ____________________________________________________________
consensus GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
 
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JMFF023N17- GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
rJMFF039E07+ GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
rJMFF023N17+ GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
                      ____________________________________________________________
consensus GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
 
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JMFF023N17- AATCCTCCCCCTTGGACTCAGCCTCCGCCGCC
rJMFF039E07+ AATCC-ACCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
rJMFF023N17+ AATCCTCCCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
                      ____________________________________________________________
consensus AATCCTCCCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
 
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rJMFF039E07+ TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
rJMFF023N17+ TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
                      ____________________________________________________________
consensus TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
 
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rJMFF039E07+ AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
rJMFF023N17+ AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
                      ____________________________________________________________
consensus AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
 
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rJMFF039E07+ CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
rJMFF023N17+ CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
                      ____________________________________________________________
consensus CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
 
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rJMFF039E07+ ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
rJMFF023N17+ ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
                      ____________________________________________________________
consensus ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
 
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rJMFF039E07+ AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGG
rJMFF023N17+ AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGGT
                      ____________________________________________________________
consensus AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGGT
 
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rJMFF023N17+ CATCAATCCAATCCCAGCTCACATTAGCTCAGTAAAAGATGATATTAAGTCTCAATTTCG
                      ____________________________________________________________
consensus CATCAATCCAATCCCAGCTCACATTAGCTCAGTAAAAGATGATATTAAGTCTCAATTTCG
 
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rJMFF023N17+ AATTTTGTAGATACAACAACTTGCCTTGTCAAATAGGATTCATAGAATCATAGCTCAAGG
                      ____________________________________________________________
consensus AATTTTGTAGATACAACAACTTGCCTTGTCAAATAGGATTCATAGAATCATAGCTCAAGG
 
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rJMFF023N17+ GCTTAGCTCAATGATTCATAGGCAGTATTTGGAAGAAGAGACCAAGGTTCGAATCTTGAT
                      ____________________________________________________________
consensus GCTTAGCTCAATGATTCATAGGCAGTATTTGGAAGAAGAGACCAAGGTTCGAATCTTGAT
 
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rJMFF023N17+ GGTAGCTGTGTGGGAATTTCAAATGTTCTGTCGGGTTGAAGTGTGGGGAGCCCATGGGGG
                      ____________________________________________________________
consensus GGTAGCTGTGTGGGAATTTCAAATGTTCTGTCGGGTTGAAGTGTGGGGAGCCCATGGGGG
 
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rJMFF023N17+ TTGGGAGGTCACCCTTTTTGGGGGAAGGATTCATAGCTTAACTTGGTGGTAATCAAAAGT
                      ____________________________________________________________
consensus TTGGGAGGTCACCCTTTTTGGGGGAAGGATTCATAGCTTAACTTGGTGGTAATCAAAAGT