Contig 008227:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF023N17-                                                               GCAGCGCA
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consensus                                                                 GCAGCGCA
 
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JMFF023N17-           ACTCCACCAGTCATGGCGGATTCCGATGAGGGCAGAGAGGATACAATTTCTGAAGTAGTA
                      ____________________________________________________________
consensus             ACTCCACCAGTCATGGCGGATTCCGATGAGGGCAGAGAGGATACAATTTCTGAAGTAGTA
 
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JMFF023N17-           ACAGAATCGTTACTGGAGAGCGTTTTCGAATTGAAGAGAATCAAGTGTACTCCTTCCATC
                      ____________________________________________________________
consensus             ACAGAATCGTTACTGGAGAGCGTTTTCGAATTGAAGAGAATCAAGTGTACTCCTTCCATC
 
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JMFF023N17-           TGCGATGCGTCTCCAACAGATACAGATCGGTCATTGGTTGCAATACGAGATTATGCTGCC
                      ____________________________________________________________
consensus             TGCGATGCGTCTCCAACAGATACAGATCGGTCATTGGTTGCAATACGAGATTATGCTGCC
 
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JMFF023N17-           GATGATTCTCCCCGCAGTTCCCTCGTCTTCCCTCCGGCGAACCACGAGAACCTCCCGGTC
                      ____________________________________________________________
consensus             GATGATTCTCCCCGCAGTTCCCTCGTCTTCCCTCCGGCGAACCACGAGAACCTCCCGGTC
 
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JMFF023N17-           TCCGTGAATCTCATCGGCGCTTTCAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
rJMFF039E07+                                 CAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
rJMFF023N17+                                                                  ATGG
                      ____________________________________________________________
consensus             TCCGTGAATCTCATCGGCGCTTTCAGTCGCCAGCACCATCTCAAATCGTCATTTTCATGG
 
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JMFF023N17-           GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
rJMFF039E07+          GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
rJMFF023N17+          GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
                      ____________________________________________________________
consensus             GAATTCCTGTCATCGCCATCGGAGTCGATGTCGTCGTCGTCTCAGTCACGATTCGTCGCC
 
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JMFF023N17-           GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
rJMFF039E07+          GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
rJMFF023N17+          GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
                      ____________________________________________________________
consensus             GAGAATGACGATTCGTCGTCTTCATTCTCTCCGTCGGGCTCCGACTTGGGGGATCCGCCC
 
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JMFF023N17-           AATCCTCCCCCTTGGACTCAGCCTCCGCCGCC                            
rJMFF039E07+          AATCC-ACCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
rJMFF023N17+          AATCCTCCCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
                      ____________________________________________________________
consensus             AATCCTCCCCCTTGGACTCAGCCTCCGCCGCCGAAAACGGTTGCCGGCTCGGCTCGGTGG
 
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rJMFF039E07+          TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
rJMFF023N17+          TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
                      ____________________________________________________________
consensus             TGGAATTTCGGAATTGAAGTCCTACATTCCAAAATCAACGGAATTCTGAAGCATCTCCGG
 
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rJMFF039E07+          AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
rJMFF023N17+          AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
                      ____________________________________________________________
consensus             AGTTTCGCTTCTGTATCAGGGGCAATTTCGTCATCCTACACTCCCGTCGGCAGAGCCACG
 
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rJMFF039E07+          CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
rJMFF023N17+          CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
                      ____________________________________________________________
consensus             CTCGCCGCGGCGGTGTTGATGTTCATATACTTCTGGCGGCGGCGGCGGCGGAGATTGGAG
 
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rJMFF039E07+          ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
rJMFF023N17+          ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
                      ____________________________________________________________
consensus             ATCAACAAGGAGAGCAGGGAACAGCTGATCCGAACAGTCAAAGAAAAAGACAAGAGGATA
 
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rJMFF039E07+          AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGG 
rJMFF023N17+          AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGGT
                      ____________________________________________________________
consensus             AATCAACTATTGGAACAAATTGCAGAAATGAATAAACTATTGGTAGCTCTTCAAAAAGGT
 
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rJMFF023N17+          CATCAATCCAATCCCAGCTCACATTAGCTCAGTAAAAGATGATATTAAGTCTCAATTTCG
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consensus             CATCAATCCAATCCCAGCTCACATTAGCTCAGTAAAAGATGATATTAAGTCTCAATTTCG
 
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rJMFF023N17+          AATTTTGTAGATACAACAACTTGCCTTGTCAAATAGGATTCATAGAATCATAGCTCAAGG
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consensus             AATTTTGTAGATACAACAACTTGCCTTGTCAAATAGGATTCATAGAATCATAGCTCAAGG
 
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rJMFF023N17+          GCTTAGCTCAATGATTCATAGGCAGTATTTGGAAGAAGAGACCAAGGTTCGAATCTTGAT
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consensus             GCTTAGCTCAATGATTCATAGGCAGTATTTGGAAGAAGAGACCAAGGTTCGAATCTTGAT
 
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rJMFF023N17+          GGTAGCTGTGTGGGAATTTCAAATGTTCTGTCGGGTTGAAGTGTGGGGAGCCCATGGGGG
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consensus             GGTAGCTGTGTGGGAATTTCAAATGTTCTGTCGGGTTGAAGTGTGGGGAGCCCATGGGGG
 
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rJMFF023N17+          TTGGGAGGTCACCCTTTTTGGGGGAAGGATTCATAGCTTAACTTGGTGGTAATCAAAAGT
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consensus             TTGGGAGGTCACCCTTTTTGGGGGAAGGATTCATAGCTTAACTTGGTGGTAATCAAAAGT