Contig 008226:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023E06Sequence448008226 (8)ref|XP_010318269.1|1e-40PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu733008226 (8)ref|XP_010318269.1|4e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu
JMFN006D11Sequence626008226 (8)ref|XP_010318269.1|1e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu
JMFN035F01Sequence627008226 (8)ref|XP_010318269.1|1e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu
JMSF007J11Sequence373008226 (8)ref|XP_011084606.1|118PREDICTED: uncharacterized protein LOC105166815 [Sesamum indicum]689008226 (8)ref|XP_010318269.1|2e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu
JMSF020K15Sequence703008226 (8)ref|XP_010318269.1|3e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu686008226 (8)ref|XP_010318269.1|2e-45PREDICTED: uncharacterized protein LOC101245530 isoform X2 [Solanum lycopersicu

Alignment

This contig is upended


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JMSF020K15+                                                                 TAAAGC
rJMFF023E06-                                                         TTTTTTATAAAGC
                      ____________________________________________________________
consensus                                                            TTTTTTATAAAGC
 
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JMSF020K15+           CACACCAAGGACACACACATCCACAGTACGCAATAGTAGCAGAGATTATTACAGTACCAG
JMFN035F01+                                                                    CAG
JMFN006D11+                                      ACGCAATAGTAGCAGAGATTATTACAGTACCAG
rJMSF007J11-                       CACACATCCACAGTACGCAATAGTAGCAGAGATTATTACAGTACCAG
rJMSF020K15-                       CACACATCCACAGTACGCAATAGTAGCAGAGATTATTACAGTACCAG
rJMFF023E06-          CACACCAAGGACACACACATCCACAGTACGCAATAGTAGCAGAGATTATTACAGTACCAG
                      ____________________________________________________________
consensus             CACACCAAGGACACACACATCCACAGTACGCAATAGTAGCAGAGATTATTACAGTACCAG
 
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JMSF020K15+           ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
JMFN035F01+           ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
JMFN006D11+           ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
rJMSF007J11-          ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
rJMSF020K15-          ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
rJMFF023E06-          ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
                      ____________________________________________________________
consensus             ATGAACATAGCAGCAGTATTAACTCTACTGCACTTAGGTTTATATACTACACACACATAG
 
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JMSF020K15+           AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
JMFN035F01+           AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
JMFN006D11+           AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
rJMSF007J11-          AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
rJMSF020K15-          AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
rJMFF023E06-          AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
                      ____________________________________________________________
consensus             AAGGATCAACCAATCCTTGCTTACTTAAGTACTATTCCACAATAGTTTTAATCTGATATA
 
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JMSF020K15+           ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
JMFN035F01+           ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
JMFN006D11+           ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGAATGGACTTGAGGTTTCTCCAG
rJMSF007J11-          ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
rJMSF020K15-          ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
rJMFF023E06-          ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
                      ____________________________________________________________
consensus             ACATATAAAGAGGATTTAGCTGTCTGGAAGAAATCAGGGATGGACTTGAGGTTTCTCCAG
 
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JMSF020K15+           ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
JMFN035F01+           ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
JMFN006D11+           ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
JMFF023E06+                    GGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
rJMSF007J11-          ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
rJMSF020K15-          ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
rJMFF023E06-          ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
                      ____________________________________________________________
consensus             ATCTTCGAGGGGGCGGAAGAAGGCTTTCTGCTCCAAAACGGAGTCAACAGTGCCAGGCGA
 
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JMSF020K15+           TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
JMFN035F01+           TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
JMFN006D11+           TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
JMFF023E06+           TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
rJMSF007J11-          TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
rJMSF020K15-          TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
JMSF007J11+                                        CAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
rJMFF023E06-          TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
                      ____________________________________________________________
consensus             TGCAGAGTGGAAACCACGCTCCCCACTTGCAGCAGCAGGGTTGTTGTCAGTGTCTGGGCC
 
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JMSF020K15+           AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
JMFN035F01+           AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
JMFN006D11+           AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
JMFF023E06+           AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
rJMSF007J11-          AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
rJMSF020K15-          AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
JMSF007J11+           AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
rJMFF023E06-          AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
                      ____________________________________________________________
consensus             AAACACCCCAGTTTGAGGATGAGGAGCCCAGTACTTATCGGATTGGGGCTGGATTACTTC
 
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JMSF020K15+           ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
JMFN035F01+           ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
JMFN006D11+           ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
JMFF023E06+           ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
rJMSF007J11-          ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
rJMSF020K15-          ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
JMSF007J11+           ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
rJMFF023E06-          ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
                      ____________________________________________________________
consensus             ATCTGGGACCACAGATGCCTGGGCATTCTCCTCTGGGTTCTTGTCGTAGACAGAGACGTG
 
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JMSF020K15+           TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
JMFN035F01+           TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
JMFN006D11+           TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
JMFF023E06+           TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
rJMSF007J11-          TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
rJMSF020K15-          TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
JMSF007J11+           TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
rJMFF023E06-          TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
                      ____________________________________________________________
consensus             TACACCCCTCCTAGAGAGGGAAGCGGAGTTGCGAGTGTTTGAGCTGATCTTGCTCACGAA
 
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JMSF020K15+           TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
JMFN035F01+           TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
JMFN006D11+           TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
JMFF023E06+           TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
rJMSF007J11-          TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
rJMSF020K15-          TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
JMSF007J11+           TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
rJMFF023E06-          TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
                      ____________________________________________________________
consensus             TAGCTTCCCAAAGCTCGCGACTCCTCGGCTCTGCAAATTGGCGGCCATACAATACAGTTT
 
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JMSF020K15+           TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
JMFN035F01+           TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
JMFN006D11+           TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGA       
JMFF023E06+           TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
rJMSF007J11-          TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
rJMSF020K15-          TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
JMSF007J11+           TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
rJMFF023E06-          TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
                      ____________________________________________________________
consensus             TTCTCGGCGCTAGATATAGAGAGAGAAAAGTAACCGTACTGATTCTAGAGAGAGAAGAGG
 
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JMSF020K15+           AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCG                         
JMFN035F01+           AAAAGGCAGTGAAGAAGAGACTGG                                    
JMFF023E06+           AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCGTC                       
rJMSF007J11-          AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCGTC                       
rJMSF020K15-          AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCG                         
JMSF007J11+           AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCGTC                       
rJMFF023E06-          AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCGTCGGATCAGCGATGACTCGAGAACC
                      ____________________________________________________________
consensus             AAAAGGCAGTGAAGAAGAGACTGGAAAAAATTCCGTCGGATCAGCGATGACTCGAGAACC