Contig 008223:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G18Sequence426020599ref|XP_006362307.1|5e-32PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Solanum tuberos716008223 (2)ref|XP_008786857.1|3e-92PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Phoe
JMFS068E03Sequence465008223 (2)ref|XP_007146147.1|2e-34hypothetical protein PHAVU_006G016200g [Phaseolus vulgaris] gb|ESW18141.1| hypot

Alignment

This contig is upended


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JMFS068E03+                                                      ATGGAAGGTTCTTCCAT
                      ____________________________________________________________
consensus                                                        ATGGAAGGTTCTTCCAT
 
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JMFS068E03+           TGCAATATCTATGGTGGTTTCTGAATAAACAATCAATCGACAACGGAGCACTTCTCCAGT
rJMFF022G18-              ATATCTATGGTGGTTTCTGAATAAACAATCAATCGACAACGGAGCACTTCTCCAGT
                      ____________________________________________________________
consensus             TGCAATATCTATGGTGGTTTCTGAATAAACAATCAATCGACAACGGAGCACTTCTCCAGT
 
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JMFS068E03+           TCGCCGCGTACGTAATATGTTGTATCGTGCGATACAACACTACACATTACAACTGCTAAC
rJMFF022G18-          TCGCCGCGTACGTAATATGTTGTATCGTGCGATACAACACTACACATTACAACTGCTAAC
                      ____________________________________________________________
consensus             TCGCCGCGTACGTAATATGTTGTATCGTGCGATACAACACTACACATTACAACTGCTAAC
 
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JMFS068E03+           ATATATTATATAGTCATAGTAGAAGACTTGAACTGTCTTCAAGTACGTCCGGCAATCCCG
rJMFF022G18-          ATATATTATATAGTCATAGTAGAAGACTTGAACTGTCTTCAAGTACGTCCGGCAATCCCG
                      ____________________________________________________________
consensus             ATATATTATATAGTCATAGTAGAAGACTTGAACTGTCTTCAAGTACGTCCGGCAATCCCG
 
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JMFS068E03+           TGGAATCATCTCAATGAATCAAGAAACAATCTTGTTTATATTTTAGAAGCATCTGCAGAA
rJMFF022G18-          TGGAATCATCTCAATGAATCAAGAAACAATCTTGTTTATATTTTAGAAGCATCTGCAGAA
                      ____________________________________________________________
consensus             TGGAATCATCTCAATGAATCAAGAAACAATCTTGTTTATATTTTAGAAGCATCTGCAGAA
 
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JMFS068E03+           ACTCGGGTCAACGCAATGGCGGCCTTGGAGCTCGACTCGCGTCCCAGATGCTTGCTGATG
rJMFF022G18-          ACTCGGGTCAACGCAATGGCGGCCTTGGAGCTCGACTCGCGTCCCAGATGCTTGCTGATG
                      ____________________________________________________________
consensus             ACTCGGGTCAACGCAATGGCGGCCTTGGAGCTCGACTCGCGTCCCAGATGCTTGCTGATG
 
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JMFS068E03+           AACTCGCCAGCCTGCAACAGCTTTCCCAGGTCGACGTTCGTTTTCACACCTAGGCCATGG
rJMFF022G18-          AACTCGCCAGCCTGCAACAGCTTTCCCAGGTCGACGTTCGTTTTCACACTTAGGCCATGG
                      ____________________________________________________________
consensus             AACTCGCCAGCCTGCAACAGCTTTCCCAGGTCGACGTTCGTTTTCACACTTAGGCCATGG
 
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JMFS068E03+           AGCATGTAGACCACGTCCTCTGTGGCGACGTTCCCGGTGGCTCCTTTGGCGTAAGGGCAG
rJMFF022G18-          AGCATGTAGACCACGTCCTCTGTGGCGACGTTCCCGGTGGCTCCTTTGGCGTAAGGGCAG
                      ____________________________________________________________
consensus             AGCATGTAGACCACGTCCTCTGTGGCGACGTTCCCGGTGGCTCCTTTGGCGTAAGGGCAG
 
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JMFS068E03+           CCTCCTAAACCGGAAACCGATGAGTCCA                                
rJMFF022G18-          CCTCCTAAACCGGAAACCGATGAGTCCACGGTGCAAACTCCCATCTGGAGAGAAACTAGG
                      ____________________________________________________________
consensus             CCTCCTAAACCGGAAACCGATGAGTCCACGGTGCAAACTCCCATCTGGAGAGAAACTAGG
 
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rJMFF022G18-          ATATTTGGAAGAGATTGTCCGTAAGTGTCGTGGAAATGGACGGCAAGCTTCTCAACAGGA
                      ____________________________________________________________
consensus             ATATTTGGAAGAGATTGTCCGTAAGTGTCGTGGAAATGGACGGCAAGCTTCTCAACAGGA
 
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rJMFF022G18-          ACAACCGCCATCACGGCTTCAAGCATGGGAATGACGGTGCCGGGCGTAGCAACTCCTATA
                      ____________________________________________________________
consensus             ACAACCGCCATCACGGCTTCAAGCATGGGAATGACGGTGCCGGGCGTAGCAACTCCTATA
 
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rJMFF022G18-          GTGTCCCCCAGTGAGATCTCAAAGCAACCCATTTCATGAAGTTCCTTGGCCAAATATGCN
                      ____________________________________________________________
consensus             GTGTCCCCCAGTGAGATCTCAAAGCAACCCATTTCATGAAGTTCCTTGGCCAAATATGCN
 
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rJMFF022G18-          ACTTTTGAAGGCAAAATTGCTCCTTCANCTGGGCACCCAACAACACACCGATATGTACCC
                      ____________________________________________________________
consensus             ACTTTTGAAGGCAAAATTGCTCCTTCANCTGGGCACCCAACAACACACCGATATGTACCC