Contig 008215:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF020E18-                                              GAGAAGAGAGGTGAGGTGAGGGTGC
JMFF039J06-                                              GAGAAGAGAGGTGAGGTGAGGGTGC
                      ____________________________________________________________
consensus                                                GAGAAGAGAGGTGAGGTGAGGGTGC
 
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JMFF020E18-           ATTTATGAATACATACTGGTACTGATGATGTGGAAATTAAGAGTCACGAGCCTTATAAAT
JMFF039J06-           ATTTATGAATACATACTGGTACTGATGATGTGGAAATTAAGAGTCACGAGCCTTATAAAT
                      ____________________________________________________________
consensus             ATTTATGAATACATACTGGTACTGATGATGTGGAAATTAAGAGTCACGAGCCTTATAAAT
 
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JMFF020E18-           TCCATCATTCTCCGTCCGACCAAACCATGCATGGCTGGCCTAGCTGGTCTGTTCTTCTCC
JMFF039J06-           TCCATCATTCTCCGTCCGACCAAACCATGCATGGCTGGCCTAGCTGGTCTGTTCTTCTCC
                      ____________________________________________________________
consensus             TCCATCATTCTCCGTCCGACCAAACCATGCATGGCTGGCCTAGCTGGTCTGTTCTTCTCC
 
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JMFF020E18-           TTCAATTCCATCCCTAAATAAACCCTCAGCTCCTTCAATTTATTCATGCCTTTCTCTACC
JMFF039J06-           TTCAATTCCATCCCTAAATAAACCCTCAGCTCCTTCAATTTATTCATGCCTTTCTCTACC
                      ____________________________________________________________
consensus             TTCAATTCCATCCCTAAATAAACCCTCAGCTCCTTCAATTTATTCATGCCTTTCTCTACC
 
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JMFF020E18-           TGCAAAACTTTATTTCAATTCTCAGATGTGTACTGTACTGTTTGTTGGTTTTGAGAGGCT
JMFF039J06-           TGCAAAACTTTATTTCAATTCTCAGATGTGTACTGTACTGTTTGTTGGTTTTGAGAGGCT
                      ____________________________________________________________
consensus             TGCAAAACTTTATTTCAATTCTCAGATGTGTACTGTACTGTTTGTTGGTTTTGAGAGGCT
 
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JMFF020E18-           GAAGCTGCCAGCATGATCTGGTAAGATAGAACAAAATCTTGGGTTTTCTTTTTCCCACTT
JMFF039J06-           GAAGCTGCCAGCATGATCTGGTAAGATAGAACAAAATCTTGGGTTTTCTTTTTCCCACTT
                      ____________________________________________________________
consensus             GAAGCTGCCAGCATGATCTGGTAAGATAGAACAAAATCTTGGGTTTTCTTTTTCCCACTT
 
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JMFF020E18-           TTTCTTTTATGGGGTTTTCATCTTTCTGCAGAAATAGAATTCACTGTACCAAAAGAACAC
JMFF039J06-           TTTCTTTTATGGGGTTTTCATCTTTCTGCAGAAATAGAATTCACTGTACCAAAAGAACAC
                      ____________________________________________________________
consensus             TTTCTTTTATGGGGTTTTCATCTTTCTGCAGAAATAGAATTCACTGTACCAAAAGAACAC
 
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JMFF020E18-           ATCTTTGGGGTTTTTTTCTGTTCTTCATTCTCCCCCCTTCTGTTTCAATTCTTTTTTTTG
JMFF039J06-           ATCTTTGGGGTTTTTTTCTGTTCTTCATTCTCCCCCCTTCTGTTTCAATTCTTTTTTTTG
rJMFF039J06+                                                                     G
                      ____________________________________________________________
consensus             ATCTTTGGGGTTTTTTTCTGTTCTTCATTCTCCCCCCTTCTGTTTCAATTCTTTTTTTTG
 
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JMFF020E18-           GTTGGTTGGTATGGGTTCTGTACATAGTTTAAAGATTGGAGAGTGAATTATGCCTAAAGT
JMFF039J06-           GTTGGTTGGTATGGGTTCTGTACATAGTTTAAAGATTGGAGAGTGAATTATGCCTAAAGT
rJMFF039J06+          GTTGGTTGGTATGGGTTCTGTACATAGTTTAAAGATTGGAGAGTGAATTATGCNTAAAGT
                      ____________________________________________________________
consensus             GTTGGTTGGTATGGGTTCTGTACATAGTTTAAAGATTGGAGAGTGAATTATGCCTAAAGT
 
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JMFF020E18-           AGACAGATCTCTTGTGC                                           
JMFF039J06-           AGACAGATCTCTTGTGCGCACCGGTATTTAGCCTTATCTGATCTACTGAGCCATTGAGTA
rJMFF039J06+          AGACAGATCTCTTGTGCGCACCGGTATTTAGCCTTATCTGATCTACTGAGCCATTGAGTA
rJMFF020E18+                                                  ATCTACTGAGCCATTGAGTA
                      ____________________________________________________________
consensus             AGACAGATCTCTTGTGCGCACCGGTATTTAGCCTTATCTGATCTACTGAGCCATTGAGTA
 
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JMFF039J06-           ATCGGGATTTTGT                                               
rJMFF039J06+          ATCGGGATTTTGTGAGGGCTCTTAGAGTTGGGGATCCAATCTTTTGGGAGAAGAAGATTG
rJMFF020E18+          ATCGGGATTTTGTGAGGGCTCTTAGAGTTGGGGATCCAATCTTTTGGGAGAAGAAGATTG
                      ____________________________________________________________
consensus             ATCGGGATTTTGTGAGGGCTCTTAGAGTTGGGGATCCAATCTTTTGGGAGAAGAAGATTG
 
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rJMFF039J06+          GAGAGGGAATTAAATCATAGTGAATTTCATTAGGTTTTCTGAGATTTGGTTCCATCAGGT
rJMFF020E18+          GAGAGGGAATTAAATCATAGTGAATTTCATTAGGTTTTCTGAGATTTGGTTCCATCAGGT
                      ____________________________________________________________
consensus             GAGAGGGAATTAAATCATAGTGAATTTCATTAGGTTTTCTGAGATTTGGTTCCATCAGGT
 
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rJMFF039J06+          CATCTAGCAGCTTCAATCACTCACCAACAATATCCAAAATAAATTCTTCAAAAATAAAAT
rJMFF020E18+          CATCTAGCAGCTTCAATCACTCACCAACAATATCCAAAATAAATTCTTCAAAAATAAAAT
                      ____________________________________________________________
consensus             CATCTAGCAGCTTCAATCACTCACCAACAATATCCAAAATAAATTCTTCAAAAATAAAAT
 
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rJMFF039J06+          AAATTGTGGAATTGATGAAGCTTAATTGGCTTCGCCTCATTCAATTCAGTCTTCCCTTGT
rJMFF020E18+          AAATTGTGGAATTGATGAAGCTTAATTGGCTTCGCCTCATTCAATTCAGTCTTCCCTTGT
                      ____________________________________________________________
consensus             AAATTGTGGAATTGATGAAGCTTAATTGGCTTCGCCTCATTCAATTCAGTCTTCCCTTGT
 
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rJMFF039J06+          GGTGGTCATATCAGATCAGGTTCTCGTGCGGGTGAGGGCTTCAGGTGCGGTTGTGCGGTT
rJMFF020E18+          GGTGGTCATATCAGATCAGGTTCTCGTGCGGGTGAGGGCTTCAGGTGCGGTTGTGCGGTT
                      ____________________________________________________________
consensus             GGTGGTCATATCAGATCAGGTTCTCGTGCGGGTGAGGGCTTCAGGTGCGGTTGTGCGGTT
 
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rJMFF039J06+          TAATCTGAGCCATTCGTCTCGCTTTAATCAACGTCCAGGATTATCAAAGTTTTTAAAAAA
rJMFF020E18+          TAATCTGAGCCATTCGTCTCGCTTTAATCAACGTCCAGGATTATCAAAGTTTTTAAAAAA
                      ____________________________________________________________
consensus             TAATCTGAGCCATTCGTCTCGCTTTAATCAACGTCCAGGATTATCAAAGTTTTTAAAAAA
 
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rJMFF039J06+          AACGCGGTGGCAATTTTGTAATTTTTGCATCTAGGTCAAAATTAAGATAGAGGGATGAGA
rJMFF020E18+          AACGCGGTGGCAATTTTGTAATTTTTGCATCTAGGTCAAAATTAAGATAGAGGGATGAGA
                      ____________________________________________________________
consensus             AACGCGGTGGCAATTTTGTAATTTTTGCATCTAGGTCAAAATTAAGATAGAGGGATGAGA
 
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rJMFF039J06+          TCAATCCTCATTTTCTCAGGGAGCTACTAGTTCTCAGTGCATTTCTTAACGTTGATGGTG
rJMFF020E18+          TCAATCCTCATTTTCTCAGGGAGCTACTAGTTCTCAGTGCATTTCTTAACGTTGATGGTG
                      ____________________________________________________________
consensus             TCAATCCTCATTTTCTCAGGGAGCTACTAGTTCTCAGTGCATTTCTTAACGTTGATGGTG
 
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rJMFF039J06+          TATATTTGCATAACTATTGGTGCCGCCGCTCTGACCACACGGAAGACGCCGCCGCACTTG
rJMFF020E18+          TATATTTGCATAACTATTGGTGCCGCCGCTCTGACCACACGGAAGACGCCGCCGCACTTG
                      ____________________________________________________________
consensus             TATATTTGCATAACTATTGGTGCCGCCGCTCTGACCACACGGAAGACGCCGCCGCACTTG
 
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rJMFF039J06+          AACTCGACTCAATATATATTATTAATTAACTTGCACATTTTGCAACATTTTAAATTTGCA
rJMFF020E18+          AACTCGACTCAATATATATTATTAATTAACTTGCACATTTTGCAACATTTTAAATTTGCA
                      ____________________________________________________________
consensus             AACTCGACTCAATATATATTATTAATTAACTTGCACATTTTGCAACATTTTAAATTTGCA
 
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rJMFF039J06+          GCCGTTAAATATGGTGTTATGGTCAAGCTTAATTACTATATATCTAGTTTTCTATAA   
rJMFF020E18+          GCCGTTAAATATGGTGTTATGGTCAAGCTTAATTACTATATATCTAGTTTTCTATAAGAT
                      ____________________________________________________________
consensus             GCCGTTAAATATGGTGTTATGGTCAAGCTTAATTACTATATATCTAGTTTTCTATAAGAT