Contig 008214:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018B10Sequence553012122 (4)ref|XP_002532315.1|9e-47Palmitoyltransferase TIP1, putative [Ricinus communis] gb|EEF30067.1| Palmitoylt750008214 (3)ref|XP_009621389.1|1e-71PREDICTED: protein S-acyltransferase 24 [Nicotiana tomentosiformis]
JMFF020A06Sequence527012122 (4)gb|KJB64637.1|2e-24hypothetical protein B456_010G059000 [Gossypium raimondii]682008214 (3)ref|XP_002532314.1|3e-38zinc finger protein, putative [Ricinus communis] gb|EEF30066.1| zinc finger prot
JMSF040M08Sequence661012122 (4)ref|XP_002532315.1|6e-68Palmitoyltransferase TIP1, putative [Ricinus communis] gb|EEF30067.1| Palmitoylt877008214 (3)emb|CAN67938.1|5e-72hypothetical protein VITISV_014238 [Vitis vinifera]

Alignment

This contig is upended


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rJMSF040M08+                                 TTCGTGCAAAGCATTGTTCAACCTGTGGTCATTGTGT
                      ____________________________________________________________
consensus                                    TTCGTGCAAAGCATTGTTCAACCTGTGGTCATTGTGT
 
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rJMFF018B10+                                            AATTGCATTGGCAAGAAAAA-CAAAT
rJMSF040M08+          GGAACAGTTTGATCACCATTGTCCTTGGGTATCTAATTGCATTGGCAAGAAAAACCAAAT
                      ____________________________________________________________
consensus             GGAACAGTTTGATCACCATTGTCCTTGGGTATCTAATTGCATTGGCAAGAAAAACCAAAT
 
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rJMFF018B10+          GGGAATTTTTCCTGTTTCTTGTTCTTGAAGTATCGGCTATGCTTGTAACTGGTGGAGTTG
rJMSF040M08+          GGGAATTTTTCCTGTTTCTTGTTCTTGAAGTATCGGCTATGCTTGTAACTGGTGGAGTTG
                      ____________________________________________________________
consensus             GGGAATTTTTCCTGTTTCTTGTTCTTGAAGTATCGGCTATGCTTGTAACTGGTGGAGTTG
 
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rJMFF018B10+          CTCTCACAAGAATTTTGACGGATCCTATGGCCCCGTCTTCTACTTTTCTCTGGTTGAACT
rJMSF040M08+          CTCTCACAAGAATTTTGACGGATCCTATGGCCCCGTCTTCTACTTTTCTCTGGTTGAACT
rJMFF020A06+                                               TTCTACTTTTCTCTGGTTGAACT
                      ____________________________________________________________
consensus             CTCTCACAAGAATTTTGACGGATCCTATGGCCCCGTCTTCTACTTTTCTCTGGTTGAACT
 
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rJMFF018B10+          ATGCTGGCACTCAGCATATTGGTGCTATAGCATTTTTTGTTGCAGACTTCTTCATTTTCT
rJMSF040M08+          ATGCTGGCACTCAGCATATTGGTGCTATAGCATTTTTTGTTGCAGACTTCTTCATTTTCT
rJMFF020A06+          ATGCTGGCACTCAGCATATTGGTGCTATAGCATTTTTTGTTGCAGACTTCTTCATTTTCT
                      ____________________________________________________________
consensus             ATGCTGGCACTCAGCATATTGGTGCTATAGCATTTTTTGTTGCAGACTTCTTCATTTTCT
 
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rJMFF018B10+          CTGGTGTAGCAGTATTAACAATCATACAGGCTTCTCAGATCTCACAAAACATTACAACAA
rJMSF040M08+          CTGGTGTAGCAGTATTAACAATCATACAGGCTTCTCAGATCTCACAAAACATTACAACAA
rJMFF020A06+          CTGGTGTAGCAGTATTAACAATCATACAGGCTTCTCAGATCTCACAAAACATTACAACAA
                      ____________________________________________________________
consensus             CTGGTGTAGCAGTATTAACAATCATACAGGCTTCTCAGATCTCACAAAACATTACAACAA
 
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rJMFF018B10+          ATGAAGTAGCAAATACAACGCGCTATAGTTACCTTAACGATGAAGCTGGTCAATTCAGAA
rJMSF040M08+          ATGAAGTAGCAAATACAACGCGCTATAGTTACCTTAACGATGAAGCTGGTCAATTCAGAA
rJMFF020A06+          ATGAAGTAGCAAATACAACGCGCTATAGTTACCTTAACGATGAAGCTGGTCAATTCAGAA
                      ____________________________________________________________
consensus             ATGAAGTAGCAAATACAACGCGCTATAGTTACCTTAACGATGAAGCTGGTCAATTCAGAA
 
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rJMFF018B10+          ATCCATATGATCATGGGGTTAAGCAAAATTGTTCAGATTTCTTGATAAATGGCTATAGTG
rJMSF040M08+          ATCCATATGATCATGGGGTTAAGCAAAATTGTTCAGATTTCTTGATAAATGGCTATAGTG
rJMFF020A06+          ATCCATATGATCATGGGGTTAAGCAAAATTGTTCAGATTTCTTGATAAATGGCTATAGTG
                      ____________________________________________________________
consensus             ATCCATATGATCATGGGGTTAAGCAAAATTGTTCAGATTTCTTGATAAATGGCTATAGTG
 
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rJMFF018B10+          AAGACATTGTGTATACTGAAGAAGAATCAGCTTCTCCCGAAGGAGATGAGACGAGGCATA
rJMSF040M08+          AAGACATTGTGTATACTGAAGAAGAATCAGCTTCTCCCGAAGGAGATGAGACGAGGCATA
rJMFF020A06+          AAGACATTGTGTATACTGAAGAAGAATCAGCTTCTCCCGAAGGAGATGAGACGAGGCATA
                      ____________________________________________________________
consensus             AAGACATTGTGTATACTGAAGAAGAATCAGCTTCTCCCGAAGGAGATGAGACGAGGCATA
 
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rJMFF018B10+          TTGCTCAGAGTTCAACCCTTCAAACAAGTGCAGCAAGACTACATTCTCACCAGGGCAATG
rJMSF040M08+          TTGCTCAGAGTTCAACCCTTCAAACAAGTGCAGCAAGACTACATTCTCACCAGGGCAATG
rJMFF020A06+          TTGCTCAGAGTTCAACCCTTCAAACAAGTGCAGCAAGACTACATTCTCACCAGGGCAATG
                      ____________________________________________________________
consensus             TTGCTCAGAGTTCAACCCTTCAAACAAGTGCAGCAAGACTACATTCTCACCAGGGCAATG
 
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rJMFF018B10+          GGAATGGGCATGTAGTTTTGGATGTGAATAAGAGCACTAGTCTTCAAAATCATGTTCTCT
rJMSF040M08+          GGAATGGGCATGTAGTTTTGGATGTGAATAAGAGCACTAGTCTTCAAAATCATGTTCTCT
rJMFF020A06+          GGAATGGGCATGTAGTTTTGGATGTGAAT-ATAGCACTAGTCTTCAAAATCATGTTCTCT
                      ____________________________________________________________
consensus             GGAATGGGCATGTAGTTTTGGATGTGAATAAGAGCACTAGTCTTCAAAATCATGTTCTCT
 
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rJMFF018B10+          CTTCTAACTGCAGTCGCCATCTTAGTAGCAAGCTCAAAACTGGCTATTTACCGTTAGGAT
rJMSF040M08+          CTTCTAACTGCAGTCGCCATCTTAGTAGCAAGCTCAAAACTGGCTATTTACCGTTAGGAT
rJMFF020A06+          CTTCTAACTGCAGTCGCCATCTTAGTAGCAAGCTCAAAACTGGCTATTTACCGTTAGGAT
                      ____________________________________________________________
consensus             CTTCTAACTGCAGTCGCCATCTTAGTAGCAAGCTCAAAACTGGCTATTTACCGTTAGGAT
 
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rJMFF018B10+          TTGGTATTGGCCTAGAGCGAAGCATCTTTCGCACTGCTCTAGTTTCATGATTAATAATTT
rJMSF040M08+          TTGGTATTGGCCTAGGGCGAAGCATCTTTCGCACTGCTCTAGTTTCATGATTAATAATTT
rJMFF020A06+          TTGGTATTGGCCTAGGGCGAAGCATCTTTCGCACTGCTCTAGTTTCATGATTAATAATTT
                      ____________________________________________________________
consensus             TTGGTATTGGCCTAGGGCGAAGCATCTTTCGCACTGCTCTAGTTTCATGATTAATAATTT
 
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rJMFF018B10+          TATATCAATCCTTGCCGATTGATGTTGTATTCTTTCGTGCATGCCATTGTTT        
rJMSF040M08+          TATATCAATCCTTGCCGATTGATGTTGTATTCTTTCGTGCATGCCATTGTTTTGTAAGTT
rJMFF020A06+          TATATCAATCCTTGCCGATTGATGTTGTATTCTTTCGTGCATGCCATTGTTTTGTAAGTT
                      ____________________________________________________________
consensus             TATATCAATCCTTGCCGATTGATGTTGTATTCTTTCGTGCATGCCATTGTTTTGTAAGTT
 
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rJMSF040M08+          CATAAGTGTAGATGTAATTCAATTATTTACAAGATAGTACTTGTCCTCAACTTGTGAAAT
rJMFF020A06+          CATAAGTGTAGATGTAATTCAATTATTTACAAGATAGTACTTGTCCTCAACTTGTGAAAT
                      ____________________________________________________________
consensus             CATAAGTGTAGATGTAATTCAATTATTTACAAGATAGTACTTGTCCTCAACTTGTGAAAT