Contig 008209:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J21Sequence601000097 (5)gb|KDP46013.1|4e-58hypothetical protein JCGZ_14920 [Jatropha curcas]702008209 (3)ref|XP_009785455.1|4e-67PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]
JMFF019B03Sequence512000097 (5)gb|KDP46013.1|4e-39hypothetical protein JCGZ_14920 [Jatropha curcas]725008209 (3)ref|XP_009785455.1|5e-65PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]
JMSF050H07Sequence710000097 (5)gb|KDP46013.1|8e-79hypothetical protein JCGZ_14920 [Jatropha curcas]750008209 (3)ref|XP_009785455.1|2e-81PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF050H07+                                                             GGGCCAGCN
                      ____________________________________________________________
consensus                                                                GGGCCAGCN
 
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rJMSF050H07+          ATTTCTTCTACACGTACCAGTTCAACAACGTGAATGGGGTTCTGTTCAACCTGAGAACGC
rJMFF013J21+                                                                 AACGC
rJMFF019B03+                                                                 AACGC
                      ____________________________________________________________
consensus             ATTTCTTCTACACGTACCAGTTCAACAACGTGAATGGGGTTCTGTTCAACCTGAGAACGC
 
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rJMSF050H07+          GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
rJMFF013J21+          GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
rJMFF019B03+          GGGGTTTGAACACTGTGTTNTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
                      ____________________________________________________________
consensus             GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
 
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rJMSF050H07+          TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
rJMFF013J21+          TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
rJMFF019B03+          TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
                      ____________________________________________________________
consensus             TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
 
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rJMSF050H07+          TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
rJMFF013J21+          TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
rJMFF019B03+          TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
                      ____________________________________________________________
consensus             TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
 
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rJMSF050H07+          GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
rJMFF013J21+          GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
rJMFF019B03+          GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
                      ____________________________________________________________
consensus             GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
 
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rJMSF050H07+          TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
rJMFF013J21+          TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
rJMFF019B03+          TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
                      ____________________________________________________________
consensus             TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
 
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rJMSF050H07+          TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
rJMFF013J21+          TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
rJMFF019B03+          TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
                      ____________________________________________________________
consensus             TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
 
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rJMSF050H07+          GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
rJMFF013J21+          GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
rJMFF019B03+          GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
                      ____________________________________________________________
consensus             GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
 
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rJMSF050H07+          TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
rJMFF013J21+          TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
rJMFF019B03+          TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
                      ____________________________________________________________
consensus             TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
 
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rJMSF050H07+          TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
rJMFF013J21+          TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAGATATA
rJMFF019B03+          TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
                      ____________________________________________________________
consensus             TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
 
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rJMSF050H07+          CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
rJMFF013J21+          CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
rJMFF019B03+          CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
                      ____________________________________________________________
consensus             CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
 
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rJMSF050H07+          CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
rJMFF013J21+          CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
rJMFF019B03+          CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
                      ____________________________________________________________
consensus             CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
 
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rJMSF050H07+          GTGTTCTGTTAATGTCGTTTT                                       
rJMFF013J21+          GTGTTCTGTTAATGTCGTTTTGTTCT                                  
rJMFF019B03+          GTGTTCTGTTAATGTCGTTTTGTTCTGTAAAATAAAGCAAAACCACATCTGCAAAGAAGT
                      ____________________________________________________________
consensus             GTGTTCTGTTAATGTCGTTTTGTTCTGTAAAATAAAGCAAAACCACATCTGCAAAGAAGT