Contig 008209:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J21Sequence601000097 (5)gb|KDP46013.1|4e-58hypothetical protein JCGZ_14920 [Jatropha curcas]702008209 (3)ref|XP_009785455.1|4e-67PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]
JMFF019B03Sequence512000097 (5)gb|KDP46013.1|4e-39hypothetical protein JCGZ_14920 [Jatropha curcas]725008209 (3)ref|XP_009785455.1|5e-65PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]
JMSF050H07Sequence710000097 (5)gb|KDP46013.1|8e-79hypothetical protein JCGZ_14920 [Jatropha curcas]750008209 (3)ref|XP_009785455.1|2e-81PREDICTED: UNC93-like protein 1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF050H07+ GGGCCAGCN
                      ____________________________________________________________
consensus GGGCCAGCN
 
. : . : . : . : . : . :
rJMSF050H07+ ATTTCTTCTACACGTACCAGTTCAACAACGTGAATGGGGTTCTGTTCAACCTGAGAACGC
rJMFF013J21+ AACGC
rJMFF019B03+ AACGC
                      ____________________________________________________________
consensus ATTTCTTCTACACGTACCAGTTCAACAACGTGAATGGGGTTCTGTTCAACCTGAGAACGC
 
. : . : . : . : . : . :
rJMSF050H07+ GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
rJMFF013J21+ GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
rJMFF019B03+ GGGGTTTGAACACTGTGTTNTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
                      ____________________________________________________________
consensus GGGGTTTGAACACTGTGTTCTACTTTGCCGCGCAGATGATCGGGTCAGTTTTGATTGGTT
 
. : . : . : . : . : . :
rJMSF050H07+ TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
rJMFF013J21+ TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
rJMFF019B03+ TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
                      ____________________________________________________________
consensus TGGTGATGGATTCGAGCTTCAAGAGGCGGAGAACCAGAGGGGTGGTCGGGATTGCCACTG
 
. : . : . : . : . : . :
rJMSF050H07+ TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
rJMFF013J21+ TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
rJMFF019B03+ TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
                      ____________________________________________________________
consensus TCGCCGCCGTGGGGACGGCGATTTGGGGCGGAGGGCTAGCCAAACAGCTTGATTACAGCC
 
. : . : . : . : . : . :
rJMSF050H07+ GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
rJMFF013J21+ GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
rJMFF019B03+ GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
                      ____________________________________________________________
consensus GGGAACACCCGCCGGAACACAGGCTGGATTTCAAGGATGGGGTGGAGTTTGCAGGGCCAT
 
. : . : . : . : . : . :
rJMSF050H07+ TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
rJMFF013J21+ TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
rJMFF019B03+ TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
                      ____________________________________________________________
consensus TTGTGTTGTATTTCAGCTATGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGG
 
. : . : . : . : . : . :
rJMSF050H07+ TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
rJMFF013J21+ TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
rJMFF019B03+ TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
                      ____________________________________________________________
consensus TCATCGGAGCCTTAGCAGATGATTCCGAAATCCTTAGCAGGTATGCTGGATTCTACAAAG
 
. : . : . : . : . : . :
rJMSF050H07+ GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
rJMFF013J21+ GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
rJMFF019B03+ GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
                      ____________________________________________________________
consensus GTGTGCAGAGTGCAGGGGCAGCAGTGGCCTGGGAAGTGGATACAAAGAAGGTATCATTCC
 
. : . : . : . : . : . :
rJMSF050H07+ TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
rJMFF013J21+ TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
rJMFF019B03+ TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
                      ____________________________________________________________
consensus TTAACCAATTCATAGCAAATTGGGCACTAACTACCATAAGCTATCCCCTTCTGGTGATTC
 
. : . : . : . : . : . :
rJMSF050H07+ TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
rJMFF013J21+ TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAGATATA
rJMFF019B03+ TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
                      ____________________________________________________________
consensus TTGTATTGTTAGCTGTTAAGGATGATGACGATGACGACAAAGCTGAGGACAATAAATATA
 
. : . : . : . : . : . :
rJMSF050H07+ CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
rJMFF013J21+ CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
rJMFF019B03+ CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
                      ____________________________________________________________
consensus CTCAATTTACTGCATCATAGTTCAGTAGTTAAGTTACGTTACGTTGTTGCATGGCTGGCT
 
. : . : . : . : . : . :
rJMSF050H07+ CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
rJMFF013J21+ CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
rJMFF019B03+ CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
                      ____________________________________________________________
consensus CCAACAACATAGGAGTTTCAGAGTTACTTAAAAACATGATAATGATCATTCATGGTTCAT
 
. : . : . : . : . : . :
rJMSF050H07+ GTGTTCTGTTAATGTCGTTTT
rJMFF013J21+ GTGTTCTGTTAATGTCGTTTTGTTCT
rJMFF019B03+ GTGTTCTGTTAATGTCGTTTTGTTCTGTAAAATAAAGCAAAACCACATCTGCAAAGAAGT
                      ____________________________________________________________
consensus GTGTTCTGTTAATGTCGTTTTGTTCTGTAAAATAAAGCAAAACCACATCTGCAAAGAAGT