Contig 008196:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B18Sequence590007883 (2)ref|XP_004303008.1|134PREDICTED: uncharacterized protein LOC101299784 [Fragaria vesca subsp. vesca]778008196 (2)emb|CDP15389.1|4e-29unnamed protein product [Coffea canephora]
JMSF023C16Sequence704007883 (2)ref|XP_009778617.1|3e-61PREDICTED: uncharacterized protein LOC104227934 isoform X2 [Nicotiana sylvestri788008196 (2)ref|XP_009611163.1|1e-78PREDICTED: uncharacterized protein LOC104104723 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023C16+ CGAGAAAAAGAAGGGAATGTTTCATCA
                      ____________________________________________________________
consensus CGAGAAAAAGAAGGGAATGTTTCATCA
 
. : . : . : . : . : . :
rJMSF023C16+ TTCCAGTTTCCTTGCTGGCGGGGCTACTTTAGCTGCTGGGAGACTTGTAGTGCAAGATGG
                      ____________________________________________________________
consensus TTCCAGTTTCCTTGCTGGCGGGGCTACTTTAGCTGCTGGGAGACTTGTAGTGCAAGATGG
 
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rJMSF023C16+ AACACCTAAGTCTATTTCACCATATAGTGGGCACTATCGGCCAACTGATGACAGTCTCAA
                      ____________________________________________________________
consensus AACACCTAAGTCTATTTCACCATATAGTGGGCACTATCGGCCAACTGATGACAGTCTCAA
 
. : . : . : . : . : . :
rJMSF023C16+ CACCTTTATATCATTTCTCAAGGAAAATGGAGTCAACCTTGATGAAGTTGAGATAAAGAA
                      ____________________________________________________________
consensus CACCTTTATATCATTTCTCAAGGAAAATGGAGTCAACCTTGATGAAGTTGAGATAAAGAA
 
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rJMSF023C16+ GGCTAATGAAGACTACGAAAATTATGAAGAGGGAAAGTCAGTGAAGACATCTGAACTTTC
                      ____________________________________________________________
consensus GGCTAATGAAGACTACGAAAATTATGAAGAGGGAAAGTCAGTGAAGACATCTGAACTTTC
 
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rJMSF023C16+ AACTCTTTCGTCTACTCCAGCAGTGCTTCCAAATGAAGAAAAGAAAGATTTGTCCTTAGA
                      ____________________________________________________________
consensus AACTCTTTCGTCTACTCCAGCAGTGCTTCCAAATGAAGAAAAGAAAGATTTGTCCTTAGA
 
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rJMSF023C16+ ATCATCTGGAGCTCTCAAATCTGCACCCAGTGGATGCTATAAAAGGACATTGTCTGGTGG
                      ____________________________________________________________
consensus ATCATCTGGAGCTCTCAAATCTGCACCCAGTGGATGCTATAAAAGGACATTGTCTGGTGG
 
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rJMSF023C16+ TCTTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
rJMFF016B18+ TTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
                      ____________________________________________________________
consensus TCTTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
 
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rJMSF023C16+ GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
rJMFF016B18+ GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
                      ____________________________________________________________
consensus GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
 
. : . : . : . : . : . :
rJMSF023C16+ TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
rJMFF016B18+ TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
                      ____________________________________________________________
consensus TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
 
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rJMSF023C16+ GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
rJMFF016B18+ GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
                      ____________________________________________________________
consensus GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
 
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rJMSF023C16+ TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
rJMFF016B18+ TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
                      ____________________________________________________________
consensus TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
 
. : . : . : . : . : . :
rJMSF023C16+ ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
rJMFF016B18+ ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
                      ____________________________________________________________
consensus ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
 
. : . : . : . : . : . :
rJMSF023C16+ GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCT
rJMFF016B18+ GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCTTGTCTGAGCATGCTCGGAA
                      ____________________________________________________________
consensus GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCTTGTCTGAGCATGCTCGGAA
 
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rJMFF016B18+ GTCCACTGAGTTTAACGTTTTGAAGCACAGAGGGTAGAGGAGTTTGTGCAGTATTGTAGC
                      ____________________________________________________________
consensus GTCCACTGAGTTTAACGTTTTGAAGCACAGAGGGTAGAGGAGTTTGTGCAGTATTGTAGC
 
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rJMFF016B18+ ACTCTGACTTGAAAAGCAGAATCCAGTTTTTGGGTGTAAGTCAAGTGGAGCACCGGAAAT
                      ____________________________________________________________
consensus ACTCTGACTTGAAAAGCAGAATCCAGTTTTTGGGTGTAAGTCAAGTGGAGCACCGGAAAT
 
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rJMFF016B18+ AAATGGCTGGTGGAAGATTAGTAATCTAATGCTGTCCTACTCCATATTTTGTATGATGGA
                      ____________________________________________________________
consensus AAATGGCTGGTGGAAGATTAGTAATCTAATGCTGTCCTACTCCATATTTTGTATGATGGA
 
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rJMFF016B18+ TGGGGGATGAGATGTAGGCCTTGCTTGCATTCTGTACACATATATGTTATCATATTTACT
                      ____________________________________________________________
consensus TGGGGGATGAGATGTAGGCCTTGCTTGCATTCTGTACACATATATGTTATCATATTTACT
 
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rJMFF016B18+ TTTACTCAAAGTTGCTGTCAAGTTTGACGCTTGGCTACTGTTTTAGGATAACCACTGTGT
                      ____________________________________________________________
consensus TTTACTCAAAGTTGCTGTCAAGTTTGACGCTTGGCTACTGTTTTAGGATAACCACTGTGT
 
. : . : . : . : . : . :
rJMFF016B18+ GAGACCTGTGAAACATGGGTCGAATATTTGATTAAGAGTTAATTCCAGTAATGTCCCCCG
                      ____________________________________________________________
consensus GAGACCTGTGAAACATGGGTCGAATATTTGATTAAGAGTTAATTCCAGTAATGTCCCCCG