Contig 008196:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016B18Sequence590007883 (2)ref|XP_004303008.1|134PREDICTED: uncharacterized protein LOC101299784 [Fragaria vesca subsp. vesca]778008196 (2)emb|CDP15389.1|4e-29unnamed protein product [Coffea canephora]
JMSF023C16Sequence704007883 (2)ref|XP_009778617.1|3e-61PREDICTED: uncharacterized protein LOC104227934 isoform X2 [Nicotiana sylvestri788008196 (2)ref|XP_009611163.1|1e-78PREDICTED: uncharacterized protein LOC104104723 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF023C16+                                           CGAGAAAAAGAAGGGAATGTTTCATCA
                      ____________________________________________________________
consensus                                              CGAGAAAAAGAAGGGAATGTTTCATCA
 
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rJMSF023C16+          TTCCAGTTTCCTTGCTGGCGGGGCTACTTTAGCTGCTGGGAGACTTGTAGTGCAAGATGG
                      ____________________________________________________________
consensus             TTCCAGTTTCCTTGCTGGCGGGGCTACTTTAGCTGCTGGGAGACTTGTAGTGCAAGATGG
 
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rJMSF023C16+          AACACCTAAGTCTATTTCACCATATAGTGGGCACTATCGGCCAACTGATGACAGTCTCAA
                      ____________________________________________________________
consensus             AACACCTAAGTCTATTTCACCATATAGTGGGCACTATCGGCCAACTGATGACAGTCTCAA
 
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rJMSF023C16+          CACCTTTATATCATTTCTCAAGGAAAATGGAGTCAACCTTGATGAAGTTGAGATAAAGAA
                      ____________________________________________________________
consensus             CACCTTTATATCATTTCTCAAGGAAAATGGAGTCAACCTTGATGAAGTTGAGATAAAGAA
 
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rJMSF023C16+          GGCTAATGAAGACTACGAAAATTATGAAGAGGGAAAGTCAGTGAAGACATCTGAACTTTC
                      ____________________________________________________________
consensus             GGCTAATGAAGACTACGAAAATTATGAAGAGGGAAAGTCAGTGAAGACATCTGAACTTTC
 
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rJMSF023C16+          AACTCTTTCGTCTACTCCAGCAGTGCTTCCAAATGAAGAAAAGAAAGATTTGTCCTTAGA
                      ____________________________________________________________
consensus             AACTCTTTCGTCTACTCCAGCAGTGCTTCCAAATGAAGAAAAGAAAGATTTGTCCTTAGA
 
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rJMSF023C16+          ATCATCTGGAGCTCTCAAATCTGCACCCAGTGGATGCTATAAAAGGACATTGTCTGGTGG
                      ____________________________________________________________
consensus             ATCATCTGGAGCTCTCAAATCTGCACCCAGTGGATGCTATAAAAGGACATTGTCTGGTGG
 
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rJMSF023C16+          TCTTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
rJMFF016B18+            TTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
                      ____________________________________________________________
consensus             TCTTCAGAGCCCGAGGGCCGAGGTGCCAAAGACGGTAATTCTGCAGAGGATCAATTCCAA
 
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rJMSF023C16+          GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
rJMFF016B18+          GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
                      ____________________________________________________________
consensus             GAAGGCATCAAATTCTTACCAATTAGCGCAACAACTCTCAAGAACATGGTCAACCGGTGC
 
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rJMSF023C16+          TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
rJMFF016B18+          TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
                      ____________________________________________________________
consensus             TGGTCCAAGAATCGGGTGTATTGCTGATTACCCCATTGAGTTGAGGTTACAAGCCTTGGA
 
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rJMSF023C16+          GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
rJMFF016B18+          GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
                      ____________________________________________________________
consensus             GCTCACTAACCTGTCGCCAAGACTTCCGCGGGTTCCATCAGGCTTGTTTTCACCCCCCAT
 
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rJMSF023C16+          TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
rJMFF016B18+          TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
                      ____________________________________________________________
consensus             TCGTTCTGCTTCAGTCCCTGTGGCATCGTTAATATGTTAAACCAAGAAAGATCTGTGTTT
 
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rJMSF023C16+          ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
rJMFF016B18+          ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
                      ____________________________________________________________
consensus             ACTCCCTAGAGCATTAGTCATTTTTCATATATGTTCCTAGCAGCAGATATATTCCCCTAT
 
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rJMSF023C16+          GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCT                   
rJMFF016B18+          GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCTTGTCTGAGCATGCTCGGAA
                      ____________________________________________________________
consensus             GCTTTAGAGTGGTAGTTTGATTATGTGTGTGCTCGCATGCTTGTCTGAGCATGCTCGGAA
 
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rJMFF016B18+          GTCCACTGAGTTTAACGTTTTGAAGCACAGAGGGTAGAGGAGTTTGTGCAGTATTGTAGC
                      ____________________________________________________________
consensus             GTCCACTGAGTTTAACGTTTTGAAGCACAGAGGGTAGAGGAGTTTGTGCAGTATTGTAGC
 
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rJMFF016B18+          ACTCTGACTTGAAAAGCAGAATCCAGTTTTTGGGTGTAAGTCAAGTGGAGCACCGGAAAT
                      ____________________________________________________________
consensus             ACTCTGACTTGAAAAGCAGAATCCAGTTTTTGGGTGTAAGTCAAGTGGAGCACCGGAAAT
 
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rJMFF016B18+          AAATGGCTGGTGGAAGATTAGTAATCTAATGCTGTCCTACTCCATATTTTGTATGATGGA
                      ____________________________________________________________
consensus             AAATGGCTGGTGGAAGATTAGTAATCTAATGCTGTCCTACTCCATATTTTGTATGATGGA
 
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rJMFF016B18+          TGGGGGATGAGATGTAGGCCTTGCTTGCATTCTGTACACATATATGTTATCATATTTACT
                      ____________________________________________________________
consensus             TGGGGGATGAGATGTAGGCCTTGCTTGCATTCTGTACACATATATGTTATCATATTTACT
 
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rJMFF016B18+          TTTACTCAAAGTTGCTGTCAAGTTTGACGCTTGGCTACTGTTTTAGGATAACCACTGTGT
                      ____________________________________________________________
consensus             TTTACTCAAAGTTGCTGTCAAGTTTGACGCTTGGCTACTGTTTTAGGATAACCACTGTGT
 
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rJMFF016B18+          GAGACCTGTGAAACATGGGTCGAATATTTGATTAAGAGTTAATTCCAGTAATGTCCCCCG
                      ____________________________________________________________
consensus             GAGACCTGTGAAACATGGGTCGAATATTTGATTAAGAGTTAATTCCAGTAATGTCCCCCG