Contig 008193:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF040H09+                                                  CCAAGAAGAAAGTATCCAAA
rJMFF015J04+                                            CAACCCCCAAGAAGAAAGTATCCAAA
                      ____________________________________________________________
consensus                                               CAACCCCCAAGAAGAAAGTATCCAAA
 
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rJMFF040H09+          GTGAAGAAAGAACATAAGGAATCCTGGTCTATGCCCAGTGATTTTGTTAAGACGCGGAGG
rJMFF029F17+            GAAGAAAGACCATAAGGAATCCTGGTCTATGCCCAGTGATTTTGTTAAGACGCGGAGG
rJMFF015J04+          GTGAAGAAAGAACATAAGGAATCNTGGTCTATGCCCAGTGATTTTGTTAAGACGCGGAGG
                      ____________________________________________________________
consensus             GTGAAGAAAGAACATAAGGAATCCTGGTCTATGCCCAGTGATTTTGTTAAGACGCGGAGG
 
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rJMFF040H09+          AATAAAGCAAAATATGAAGGTGACTATACATCAGGGTACAAAACAAAACGAAGGGGAGGT
rJMFF029F17+          AATAAAGCAAAATATGAAGGTGACTATACATCAGGGTACAAAACAAAACGAAGGGGAGGT
rJMFF015J04+          AATAAAGCAAAATATGAAGGTGACTATACATCAGGGTACAAAACAAAACGAAGGGGAGGT
                      ____________________________________________________________
consensus             AATAAAGCAAAATATGAAGGTGACTATACATCAGGGTACAAAACAAAACGAAGGGGAGGT
 
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rJMFF040H09+          TGGATCATGGATGACCCGGAAGACTACTCAGAACCCAAAGGATTTGCAAGTCCTGTAACT
rJMFF029F17+          TGGATCATGGATGACCCGGAAGACTACTCAGAACCCAAAGGATTTGCAAGTCCTGTAACT
rJMFF015J04+          TGGATCATGGATGACCCGGAAGACTACTCAGAACCCAAAGGATTTGCAAGTCCTGTAACT
                      ____________________________________________________________
consensus             TGGATCATGGATGACCCGGAAGACTACTCAGAACCCAAAGGATTTGCAAGTCCTGTAACT
 
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rJMFF040H09+          CCAAGTAGTAAGAGATCTTGGAAGTACAATGGAAATGCTTCCAGTCCTTGGTCGTCCTCA
rJMFF029F17+          CCAAGTAGTAAGAGATCTTGGAAGTACAATGGAAATGCTTCCAGTCCTTGGTCGTCCTCA
rJMFF015J04+          CCAAGTAGTAAGAGATCTTGGAAGTACAATGGAAATGCTTCCAGTCCTTGGTCGTCCTCA
                      ____________________________________________________________
consensus             CCAAGTAGTAAGAGATCTTGGAAGTACAATGGAAATGCTTCCAGTCCTTGGTCGTCCTCA
 
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rJMFF040H09+          AGAAAGTCCCATAAGCTTAACTATAGTCATTCATCTTCTAGTGCTTCAGCCAAAGGCATC
rJMFF029F17+          AGAAAGTCCCATAAGCTTAACTATAGTCATTCATCTTCTAGTGCTTCAGCCAAAGGCATC
rJMFF015J04+          AGAAAGTCCCATAAGCTTAACTATAGTCATTCATCTTCTAGTGCTTCAGCCAAAGGCATC
                      ____________________________________________________________
consensus             AGAAAGTCCCATAAGCTTAACTATAGTCATTCATCTTCTAGTGCTTCAGCCAAAGGCATC
 
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rJMFF040H09+          CACCATAGGTTTTCTGCCTCCCGATTTGGCAACAGTAGTCATGGTGGGACAAGAAACCAT
rJMFF029F17+          CACCATAGGTTTTCTGCCTCCCGATTTGGCAACAGTAGTCATGGTGGGACAAGAAACCAT
rJMFF015J04+          CACCATAGGCTTTCTGCCTCCCGATTTGGCAACAGTAGTCATGGTGGGACAAGAAACCAT
                      ____________________________________________________________
consensus             CACCATAGGTTTTCTGCCTCCCGATTTGGCAACAGTAGTCATGGTGGGACAAGAAACCAT
 
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rJMFF040H09+          GATTGGTAGCAGAATGCCTGTTCCTCTTGGTAAACCATAAATGGGCAGGCTGTTGCATAT
rJMFF029F17+          GATTGGTAGCAGAATGCCTGTTCCTCTTGGTAAACCATAAATGGGCAGGCTGTTGCATAT
rJMFF015J04+          GATTGGTAGCAGAATGCCTGTTCCTCTTGGTAAACCATAAATGGGCAGGCTGTTGCATAT
                      ____________________________________________________________
consensus             GATTGGTAGCAGAATGCCTGTTCCTCTTGGTAAACCATAAATGGGCAGGCTGTTGCATAT
 
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rJMFF040H09+          GCACTCTGGGGTGGGGGGTTGGTATCTGAATGATCAATGGTATTTTTGAGTTTGCATGTT
rJMFF029F17+          GCACTCTGGGGTGGGGGGTTGGTATCTGAATGATCAATGGTATTTTTGAGTTTGCATGTT
rJMFF014B16+                TGGGGTGGGGGGTTGGTATCNGAATGATCAATGGTATTNNNGAGNNNGCATGTC
rJMFF015J04+          GCACTCTGGGGTGGGGGGTTGGTATCTGAATGATCAATGGTATTTTTGAGTTTGCATGTT
                      ____________________________________________________________
consensus             GCACTCTGGGGTGGGGGGTTGGTATCTGAATGATCAATGGTATTTTTGAGTTTGCATGTT
 
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rJMFF040H09+          GACTCGTAAGAGTTGGGTGAAAGACCGTATGCACCCGGTGTGCCGATTACATTTCACAAG
rJMFF029F17+          GACTCGTAAGAGTTGGGTGAAAGACCGTATGCACCCGGTGTGCCGATTACATTTCACAAG
rJMFF014B16+          GACTCGTAAGAGTNGGGTGAAAGNCCGTATGCACCCGGTGTGCCGATTACATTTCACAAG
rJMFF015J04+          GACTCGTAAGAGTTGGGTGAAAGACCGTATGCACCCGGTGTGCCGATTACATTTCACAAG
                      ____________________________________________________________
consensus             GACTCGTAAGAGTTGGGTGAAAGACCGTATGCACCCGGTGTGCCGATTACATTTCACAAG
 
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rJMFF040H09+          ATTTAGTCACGTCTTGTAGCCCGTGTTGTTTATGCTGGCGATTGTAACTTATAGGGTACC
rJMFF029F17+          ATTTAGTCACGTCTTGTAGCCCGTGTTGTTTATGCTGGCGATTGTAACTTATAGGGTACC
rJMFF014B16+          ATTTAGTCACGTCTTGTAGCCCGTGTTGTNTATGCTGGNGATTGTAACTTATAGGGTACC
rJMFF015J04+          ATTTAGTCACGTCTTGTAGCCCGTGTTGTTTATGCTGGCGATTGTAACTTATAGGGTACC
                      ____________________________________________________________
consensus             ATTTAGTCACGTCTTGTAGCCCGTGTTGTTTATGCTGGCGATTGTAACTTATAGGGTACC
 
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rJMFF040H09+          CTTATGTTTTCCCTTGCAAAAGAAGGATCTTCTGTGTTCCTTTTGTTTTAATTTTTTCAT
rJMFF029F17+          CTTATGTTTTCCCTTGCAAAAGAAGGATCTTCTGTGTTCCTTTTGTTTTAATTTTTTCAT
rJMFF014B16+          CTTATGTTTTCCCTTGCAAAAGAAGGATCTTCTGTGTTCCTTTTGTTTTAATTTTTTCAT
rJMFF015J04+          CTTATGTTTTCCCTTGCAAAAGAAGGATCTTCTGTGTTCCTTTTGTTTTAATTTTTTCAT
                      ____________________________________________________________
consensus             CTTATGTTTTCCCTTGCAAAAGAAGGATCTTCTGTGTTCCTTTTGTTTTAATTTTTTCAT
 
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rJMFF040H09+          ATGTTATAGTCATACATGAACCATTGTAAT                              
rJMFF029F17+          ATGTTATAGTCATACATGAACCATTGTAAT                              
rJMFF014B16+          ANGTTATAGTCATACATGAACCATTGTAAT                              
rJMFF015J04+          ATGTTATAGTCATACATGAACCATTGTAATCTGCGGGAGTTCGCTTGCAGTAANGAAAAT
                      ____________________________________________________________
consensus             ATGTTATAGTCATACATGAACCATTGTAATCTGCGGGAGTTCGCTTGCAGTAANGAAAAT