Contig 008190:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014M20Sequence581008190 (4)ref|XP_011087582.1|95.1PREDICTED: uncharacterized protein LOC105169022 [Sesamum indicum]462008190 (4)ref|XP_011087582.1|87.4PREDICTED: uncharacterized protein LOC105169022 [Sesamum indicum]
JMFF035M08Sequence482008190 (4)ref|XP_011087582.1|95.1PREDICTED: uncharacterized protein LOC105169022 [Sesamum indicum]465008190 (4)ref|XP_011087582.1|87.4PREDICTED: uncharacterized protein LOC105169022 [Sesamum indicum]

Alignment

This contig is upended


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JMFF035M08-                                              GTACACCCTCCCTCTCCCTCTCCCT
JMFF014M20-                                              GTACACCCTCCCTCTCCCTCTCCCT
                      ____________________________________________________________
consensus                                                GTACACCCTCCCTCTCCCTCTCCCT
 
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JMFF035M08-           CTCCCTCTCTCTCTCTCTCTACATATACATACAACCACAAAGCTAATAAGCACTGAATAT
JMFF014M20-           CTCCCTCTCTCTCTCTCTCTACATATACATACAACCACAAAGCTAATAAGCACTGAATAT
                      ____________________________________________________________
consensus             CTCCCTCTCTCTCTCTCTCTACATATACATACAACCACAAAGCTAATAAGCACTGAATAT
 
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JMFF035M08-           ATAAAGAACCTTCCACCTTCAATAATTCATCACCAGCCATCATCCACTACATCCCCCTGC
JMFF014M20-           ATAAAGAACCTTCCACCTTCAATAATTCATCACCAGCCATCATCCACTACATCCCCCTGC
                      ____________________________________________________________
consensus             ATAAAGAACCTTCCACCTTCAATAATTCATCACCAGCCATCATCCACTACATCCCCCTGC
 
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JMFF035M08-           AGCCTCTCTATCTCGATCTCTACATATATATACATACAACCAGCAATTAACCACATGTTG
JMFF014M20-           AGCCTCTCTATCTCGATCTCTACATATATATACATACAACCAGCAATTAACCACATGTTG
rJMFF035M08+                              TACATATATATACATACAACCAGCAATTAACCNCATGTTG
rJMFF014M20+                              TACATATATATACATACAACCAGCAATTAACCNCATGTTG
                      ____________________________________________________________
consensus             AGCCTCTCTATCTCGATCTCTACATATATATACATACAACCAGCAATTAACCACATGTTG
 
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JMFF035M08-           TATGTATAGGTATAGGTATAGCCAAAGGCAGCAAACATTATATACATATCCATGACGGGG
JMFF014M20-           TATGTATAGGTATAGGTATAGCCAAAGGCAGCAAACATTATATACATATCCATGACGGGG
rJMFF035M08+          TATGTATAGGTATAGGTATAGCCAAAGGCAGCAAACATTATATACATATCCATGACGGGG
rJMFF014M20+          TATGTATAGGTATAGGTATAGCCAAAGGCAGCAAACATTATATACATATCCATGACGGGG
                      ____________________________________________________________
consensus             TATGTATAGGTATAGGTATAGCCAAAGGCAGCAAACATTATATACATATCCATGACGGGG
 
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JMFF035M08-           CCCACCAGCATGTACATGTTCAGGGACACATCGGAGATGGAGAAGAGGCAGCTGTTCTTG
JMFF014M20-           CCCACCAGCATGTACATGTTCAGGGACACATCGGAGATGGAGAAGAGGCAGCTGTTCTTG
rJMFF035M08+          CCCNCCAGCATGTACATGTTCAGGGACACATNGGAGATGGAGAAGAGGCAGCTGTTNTTG
rJMFF014M20+          CCCNCCAGCATGTACATGTTCAGGGACACATNGGAGATGGAGAAGAGGCAGCTGTTNTTG
                      ____________________________________________________________
consensus             CCCACCAGCATGTACATGTTCAGGGACACATCGGAGATGGAGAAGAGGCAGCTGTTCTTG
 
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JMFF035M08-           AGGAGCTACCAGTTCAGCAGGAAGAAGAGCGTTGCAGAGAAAATAAAAGCGTCTTTCTTT
JMFF014M20-           AGGAGCTACCAGTTCAGCAGGAAGAAGAGCGTTGCAGAGAAAATAAAAGCGTCTTTCTTT
rJMFF035M08+          AGGAGCTACCAGTTCAGCAGGAAGAAGAGCGTTGCAGAGAAAATAAAAGNGTNTTTNTTT
rJMFF014M20+          AGGAGCTACCAGTTCAGCAGGAAGAAGAGCGTTGCAGAGAAAATAAAAGNGTNTTTNTTT
                      ____________________________________________________________
consensus             AGGAGCTACCAGTTCAGCAGGAAGAAGAGCGTTGCAGAGAAAATAAAAGCGTCTTTCTTT
 
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JMFF035M08-           AGGGTCAAAAGGGTCATTTGGCGTAAGGTCAGATCAGCCAGAAAGCTCAGAAGGACTGTT
JMFF014M20-           AGGGTCAAAAGGGTCATTTGGCGTAAGGTCAGATCAGCCAGAAAGCTCAGAAGGACTGTT
rJMFF035M08+          AGGGTCAAAAGGGTCATTTGGNGTAAGGTCAGATCAGCCAGAAAGCTCAGAAGGACTGTT
rJMFF014M20+          AGGGTCAAAAGGGTCATTTGGNGTAAGGTCAGATCAGCCAGAAAGCTCAGAAGGACTGTT
                      ____________________________________________________________
consensus             AGGGTCAAAAGGGTCATTTGGCGTAAGGTCAGATCAGCCAGAAAGCTCAGAAGGACTGTT
 
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JMFF035M08-           TGGTTGAAGCTCAAAAATGGCCTTTTCATTTGTAGAA                       
JMFF014M20-           TGGTTGAAGCTCAAAAATGGCCTTTTCATTTGTAGAAGAAGAAGAGGAAGCTTCTTCCTT
rJMFF035M08+          TGGTTGAAGCTCAAAAATGGCCTTTTCATTTGTAGAAGAAGAAGAGGAAGCTTTTTCCTT
rJMFF014M20+          TGGTTGAAGCTCAAAAATGGCCTTTTCATTTGTAGAAGAAGAAGAGGAAGCTTTTTCCTT
                      ____________________________________________________________
consensus             TGGTTGAAGCTCAAAAATGGCCTTTTCATTTGTAGAAGAAGAAGAGGAAGCTTTTTCCTT
 
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JMFF014M20-           CGCCTTAACACTAACAATGGTAGCCTCACTCATAAATATTGTTTCTGCTAATTTTTTTTT
rJMFF035M08+          CGCCTTAACACTAACAATGGTAGCCTCACTCATAAATATTGTTTNTGNTAATTTTTTTTT
rJMFF014M20+          CGCCTTAACACTAACAATGGTAGCCTCACTCATAAATATTGTTTNTGNTAATTTTTTTTT
                      ____________________________________________________________
consensus             CGCCTTAACACTAACAATGGTAGCCTCACTCATAAATATTGTTTCTGCTAATTTTTTTTT
 
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JMFF014M20-           TTTAATTATTTTTTTT                                            
rJMFF035M08+          TTTAATTATTTTTTTTAATTAGGAAATTTGTGTAGTCTCTAGCTAAGGGCATGCCTCACT
rJMFF014M20+          TTTAATTATTTTTTTTAATTAGGAAATTTGTGTAGTCTCTAGCTAAGGGCATGCCTCACT
                      ____________________________________________________________
consensus             TTTAATTATTTTTTTTAATTAGGAAATTTGTGTAGTCTCTAGCTAAGGGCATGCCTCACT