| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009H01 | Sequence | 547 | 001624 (2) | ref|XP_003537244.1| | 4e-42 | PREDICTED: zinc finger CCCH domain-containing protein 21-like [Glycine max] gb| | 691 | 008189 (4) | gb|ABA81871.1| | 2e-34 | unknown [Solanum tuberosum] |
| JMFF014G01 | Sequence | 569 | 001624 (2) | ref|XP_003537244.1| | 4e-48 | PREDICTED: zinc finger CCCH domain-containing protein 21-like [Glycine max] gb| | 717 | 008189 (4) | gb|ABA81871.1| | 2e-35 | unknown [Solanum tuberosum] |
| JMFF036L14 | Sequence | 445 | 008189 (4) | gb|ABA81871.1| | 5e-18 | unknown [Solanum tuberosum] | 420 | 008189 (4) | gb|ABA81871.1| | 4e-18 | unknown [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF009H01+ GCTAGAAGAAGAAGCAGATAAAGTATCTGTT
rJMFF014G01+ TTTTGAAATCCCCAGATGAAGGCTNTGCTAGAAGAAGAAGCAGATAAAGTATCTGTT
____________________________________________________________
consensus TTTTGAAATCCCCAGATGAAGGCTNTGCTAGAAGAAGAAGCAGATAAAGTATCTGTT
. : . : . : . : . : . :
rJMFF009H01+ GAGGAAGAGATTGAAAATCAGCGTTCGAAATTGACTAAATCAACTCCCATGACCCCCGAT
rJMFF014G01+ GAGGAAGAGATTGAAAATCAGCGTTCGAAATTGACTAAATCAACTCCCATGACCCCCGAT
____________________________________________________________
consensus GAGGAAGAGATTGAAAATCAGCGTTCGAAATTGACTAAATCAACTCCCATGACCCCCGAT
. : . : . : . : . : . :
rJMFF009H01+ CTATTTATGGAATGGAAGAAAAAGAAAAGGGAAGAGAAAGAAGCTCAATTGGCCTTGCAA
rJMFF014G01+ CTATTTATGGAATGGAAGAAAAAGAAAAGGGAAGAGAAAGAAGCTCAATTGGCCTTGCAA
____________________________________________________________
consensus CTATTTATGGAATGGAAGAAAAAGAAAAGGGAAGAGAAAGAAGCTCAATTGGCCTTGCAA
. : . : . : . : . : . :
rJMFF009H01+ ATGGCAGAGAGAGCCAAGAATGATCGCATGAGTGGACGTGAGCTGTTCATGGCAGACTCC
JMFF036L14- ACGTGAGCTGTTCATGGCAGACTCC
rJMFF036L14+ ACGTGAGCTGTTCATGGCAGACTCC
rJMFF014G01+ ATGGCAGAGAGAGCCAAGAATGATCGCATGAGTGGACGTGAGCTGTTCATGGCAGACTCC
____________________________________________________________
consensus ATGGCAGAGAGAGCCAAGAATGATCGCATGAGTGGACGTGAGCTGTTCATGGCAGACTCC
. : . : . : . : . : . :
rJMFF009H01+ AGTTGGTTTGTGGATGACATTGGCGCCTATGATAAATATGAAAGGGAGGAAGAGTCGAAT
JMFF036L14- AGTTGGTTTGTGGATGACATTGGCGCCTATGATAAATATGAAAGGGAGGAAGAGTCGAAT
rJMFF036L14+ AGTTGGTTTGTGGATGACATTGGCGCCTATGATAAATATGAAAGGGAGGAAGAGTCGAAT
rJMFF014G01+ AGTTGGTTTGTGGATGACATTGGCGCCTATGATAAATATGAAAGGGAGGAAGAGTCGAAT
____________________________________________________________
consensus AGTTGGTTTGTGGATGACATTGGCGCCTATGATAAATATGAAAGGGAGGAAGAGTCGAAT
. : . : . : . : . : . :
rJMFF009H01+ GAACAAAAGGTTGACAAAGATTCTTCTAAAGGCGAGCCAAGTACCTCGACCTCAGCCCCA
JMFF036L14- GAACAAAAGGTTGACAAAGATTCTTCTAAAGGCGAGACGAGTACCTCGACCTCAGCCCCA
rJMFF036L14+ GAACAAAAGGTTGACAAAGATTCTTCTAAAGGCGAGACGAGTACCTCGACCTCAGCCCCA
rJMFF014G01+ GAACAAAAGGTTGACAAAGATTCTTCTAAAGGCGAGCCAAGTACCTCGACCTCAGCCCCA
____________________________________________________________
consensus GAACAAAAGGTTGACAAAGATTCTTCTAAAGGCGAGACGAGTACCTCGACCTCAGCCCCA
. : . : . : . : . : . :
rJMFF009H01+ GGAACCAGTGACTCCAAAGATGTTTCTGATGTTGATGATGATGACCTCGACGACGATTTG
JMFF036L14- GGAACCAGTGACTCCAAAGATGTTTCTGATGTTGATGATGATGACCTCGACGACGATTTG
rJMFF036L14+ GGAACCAGTGACTCCAAAGATGTTTCTGATGTTGATGATGATGACCTCGACGACGATTTG
rJMFF014G01+ GGAACCAGTGACTCCAAAGATGTTTCTGATGTTGATGATGATGACCTCGACGACGATTTG
____________________________________________________________
consensus GGAACCAGTGACTCCAAAGATGTTTCTGATGTTGATGATGATGACCTCGACGACGATTTG
. : . : . : . : . : . :
rJMFF009H01+ GATGTTGACGAGTTGAATGAACTGGAGGCGAGCCTTTCGAAAACAACATTACAAATCAAA
JMFF036L14- GATGTTGACGAGTTGAATGAACTGGAGGCGAGCCTTTCGAAAACAACATTACAAATCAAA
rJMFF036L14+ GATGTTGACGAGTTGAATGAACTGGAGGCGAGCCTTTCGAAAACAACATTACAAATCAAA
rJMFF014G01+ GATGTTGACGAGTTGAATGAACTGGAGGCGAGCCTTTCGAAAACAACATTACAAATCAAA
____________________________________________________________
consensus GATGTTGACGAGTTGAATGAACTGGAGGCGAGCCTTTCGAAAACAACATTACAAATCAAA
. : . : . : . : . : . :
rJMFF009H01+ GAAGCCGGTGACAAAGCATGAGCCAAGAATTTGAATTGATGAGCTTCTCTTGTTGCTTTT
JMFF036L14- GAAGCCGGTGACAAAGCATGAGCCAAGAATTTGAATTGATGAGCTTCTCTTGTTGCTTTT
rJMFF036L14+ GAAGCCGGTGACAAAGCATGAGCCAAGAATTTGAATTGATGAGCTTCTCTTGTTGCTTTT
rJMFF014G01+ GAAGCCGGTGACAAAGCATGAGCCAAGAATTTGAATTGATGAGCTTCTCTTGTTGCTTTT
____________________________________________________________
consensus GAAGCCGGTGACAAAGCATGAGCCAAGAATTTGAATTGATGAGCTTCTCTTGTTGCTTTT
. : . : . : . : . : . :
rJMFF009H01+ TGAAGTAATTTTCTGAATCCTGAACCTAAATATTATCGATTTTGGCACTTCATATTTTCT
JMFF036L14- TGAAGTAATTTTCTGAATCCTGAACCTAAATATTATCGATTTTGGCACTTCATATTTTCT
rJMFF036L14+ TGAAGTAATTTTCTGAATCCTGAACCTAAATATTATCGATTTTGGCACTTCATATTTTCT
rJMFF014G01+ TGAAGTAATTTTCTGAATCCTGAACCTAAATATTATCGATTTTGGCACTTCATATTTTCT
____________________________________________________________
consensus TGAAGTAATTTTCTGAATCCTGAACCTAAATATTATCGATTTTGGCACTTCATATTTTCT
. : . : . : . : . : . :
rJMFF009H01+ TTTTTCTACCCCCATCTTTGCACTCTAAAACGAAATAAATGGATTTCGATATGAGTACTT
JMFF036L14- TTTTTCTACCCCCATCTTTGCACTCTAAAACGAAATAAATGGATTTCGATA
rJMFF036L14+ TTTTTCTACCCCCATCTTTGCACTCTAAAACGAAA
rJMFF014G01+ TTTTTCTACCCCCATCTTTGCACTCTAAAACGAAATAAATGGATTTCGATATGAGTACTT
____________________________________________________________
consensus TTTTTCTACCCCCATCTTTGCACTCTAAAACGAAATAAATGGATTTCGATATGAGTACTT
. : . : . : . : . : . :
rJMFF009H01+ TGCCCTTTTTTCTCCAAGCCCACAGACAGTGAACTAGTGACCTAATTATTCCCTTCTTTG
rJMFF014G01+ TGCCCTTTTTTCTCCAAGCCCACAGACAGTGAACTAGTGACCTAATTATTCCCTTCTTTG
____________________________________________________________
consensus TGCCCTTTTTTCTCCAAGCCCACAGACAGTGAACTAGTGACCTAATTATTCCCTTCTTTG