Contig 008184:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009N10+                                                  CTCAGGTCCGTCTGGGTGAG
rJMFF012P20+                                                               GGGTGAG
                      ____________________________________________________________
consensus                                                     CTCAGGTCCGTCTGGGTGAG
 
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rJMSF009N10+          CAATATGTAAATAATCCTACACTCTCAGATGTGATATTTTTAGTTGAAGGCAAGCGGTTT
rJMFF012P20+          CAATATGTAAATAATCCTACACTCTCAGATGTGATATTTTTAGTTGAAGGCAAGCGGTTT
                      ____________________________________________________________
consensus             CAATATGTAAATAATCCTACACTCTCAGATGTGATATTTTTAGTTGAAGGCAAGCGGTTT
 
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rJMSF009N10+          TATGCCCACAGAATTTGCCTGCTTGCTTCTTCTGATGCATTTAGGGCAATGTTTGATGGT
rJMFF012P20+          TATGCCCACAGAATTTGCCTGCTTGCTTCTTCTGATGCATTTAGGGCAATGTTTGATGGT
                      ____________________________________________________________
consensus             TATGCCCACAGAATTTGCCTGCTTGCTTCTTCTGATGCATTTAGGGCAATGTTTGATGGT
 
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rJMSF009N10+          GGTTATAGGGAGAGAGACGCAAAAGACATTGAGATCCCTAATATCAGATGGGATATTTTT
rJMFF012P20+          GGTTATAGGGAGAGAGACGCAAAAGACATTGAGATCCCTAATATCAGATGGGATATTTTT
                      ____________________________________________________________
consensus             GGTTATAGGGAGAGAGACGCAAAAGACATTGAGATCCCTAATATCAGATGGGATATTTTT
 
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rJMSF009N10+          GAGTTGATGATGAGATACATATACACAGGGACTGTTGATGTTAATTTGGAAATTGCCCAG
rJMFF012P20+          GAGTTGATGATGAGATACATATACACAGGGACTGTTGATGTTAATTTGGAAATTGCCCAG
                      ____________________________________________________________
consensus             GAGTTGATGATGAGATACATATACACAGGGACTGTTGATGTTAATTTGGAAATTGCCCAG
 
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rJMSF009N10+          GAGCTTTTAAGAGCAGCTGATCAGTATCTGCTAGAGGGCCTAAAACGTCTATGTGAATAT
rJMFF012P20+          GAGCTTTTAAGAGCAGCTGATCAGTATCTGCTAGAGGGCCTAAAACGTCTATGTGAATAT
                      ____________________________________________________________
consensus             GAGCTTTTAAGAGCAGCTGATCAGTATCTGCTAGAGGGCCTAAAACGTCTATGTGAATAT
 
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rJMSF009N10+          ACAATTGCACAGGATATCTCGGTGGAAAATGTCTCTCTGATGTTTGAGTTGTCAGAAGCA
rJMFF012P20+          ACAATTGCACAGGATATCTCGGTGGAAAATGTCTCTCTGATGTTTGAGTTGTCAGAAGCA
                      ____________________________________________________________
consensus             ACAATTGCACAGGATATCTCGGTGGAAAATGTCTCTCTGATGTTTGAGTTGTCAGAAGCA
 
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rJMSF009N10+          TTTAGTGCCACATCATTAAGAAATGCTTGCATTCTTTTTGTGTTGGAGAACTTTGACAAA
rJMFF012P20+          TTTAGTGCCACATCATTAAGAAATGCTTGCATTCTTTTTGTGTTGGAGAACTTTGACAAA
                      ____________________________________________________________
consensus             TTTAGTGCCACATCATTAAGAAATGCTTGCATTCTTTTTGTGTTGGAGAACTTTGACAAA
 
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rJMSF009N10+          CTTAGTGTCATGCCTTGGTATCCACCTCTGATTCAACGAATATTGCCTGAGACTCGTACC
rJMFF012P20+          CTTAGTGTCATGCCTTGGTATCCACCTCTGATTCAACGAATATTGCCTGAGACTCGTACC
                      ____________________________________________________________
consensus             CTTAGTGTCATGCCTTGGTATCCACCTCTGATTCAACGAATATTGCCTGAGACTCGTACC
 
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rJMSF009N10+          TACTTTGTGAGAGCGCTCACCAGACCGTTTCATACTGACTTTCGGCGGTAGATGGCTTGT
rJMFF012P20+          TACTTTGTGAGAGCGCTCACCAGACCGTTTCATACTGACTTTCGGCGGTAGATGGCTTGT
                      ____________________________________________________________
consensus             TACTTTGTGAGAGCGCTCACCAGACCGTTTCATACTGACTTTCGGCGGTAGATGGCTTGT
 
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rJMSF009N10+          TTTCAGTTTTGATCTTTGGATTAACTTTAATGTAGAAGAGAAAAGAAGATGTACAGGAGT
rJMFF012P20+          TTTCAGTTTTGATCTTTGGATTAACTTTAATGTAGAAGAGAAAAGAAGATGTACAGGAGT
                      ____________________________________________________________
consensus             TTTCAGTTTTGATCTTTGGATTAACTTTAATGTAGAAGAGAAAAGAAGATGTACAGGAGT
 
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rJMSF009N10+          GGACAGTTTGATTGCGGTGTAGTCGGAATGGAAGCACCAGTTAGCTGTATTTATCTGGAT
rJMFF012P20+          GGACAGTTTGATTGCGGTGTAGTCGGAATGGAAGCACCAGTTAGCTGTATTTATCTGGAT
                      ____________________________________________________________
consensus             GGACAGTTTGATTGCGGTGTAGTCGGAATGGAAGCACCAGTTAGCTGTATTTATCTGGAT
 
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rJMSF009N10+          CTGTAATACCAATTGATTGTTACTACCACAATTTGAGAGT                    
rJMFF012P20+          CTGTAATACCAATTGATTGTTACTACCACAATTTGAGAGTTGAAACTTCATTCTTAGAGA
                      ____________________________________________________________
consensus             CTGTAATACCAATTGATTGTTACTACCACAATTTGAGAGTTGAAACTTCATTCTTAGAGA
 
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rJMFF012P20+          CATGTATGTACTACTAATTTATGATTCTACTTATCAAGAAAACAGTGGAATGGAAGGCAC
                      ____________________________________________________________
consensus             CATGTATGTACTACTAATTTATGATTCTACTTATCAAGAAAACAGTGGAATGGAAGGCAC