Contig 008182:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012J19Sequence456008182 (3)ref|XP_009620477.1|97.4PREDICTED: uncharacterized protein LOC104112304 [Nicotiana tomentosiformis]661008182 (3)ref|XP_009796686.1|162PREDICTED: uncharacterized protein LOC104243225 [Nicotiana sylvestris]
JMFN034M01Sequence630008182 (3)ref|XP_009796686.1|162PREDICTED: uncharacterized protein LOC104243225 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF012J19-                                                                     G
                      ____________________________________________________________
consensus                                                                        G
 
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JMFN034M01+                                                    TGAAAGCCCAAAAATCAGG
rJMFF012J19-          AATTTCTTGCTGTTTATTGTTTTCAGATCCATTCAGTGAATTGAAAGCCCAAAAATCAGG
                      ____________________________________________________________
consensus             AATTTCTTGCTGTTTATTGTTTTCAGATCCATTCAGTGAATTGAAAGCCCAAAAATCAGG
 
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JMFN034M01+           CATAAACGACGACATCAATAATAAAATTTCCAATTTTGACTTNTACGACACCCAATTTCT
rJMFF012J19-          CATAAACGACGACATCAATAATAAAATTTCCAATTTTGACTTTTACGACACCCAATTTCT
                      ____________________________________________________________
consensus             CATAAACGACGACATCAATAATAAAATTTCCAATTTTGACTTTTACGACACCCAATTTCT
 
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JMFN034M01+           CCATTATTGTTCACAGGAAAAAAATTGATCTTCAAGAAGGATGGACCTTTTTGGAGTGAG
rJMFF012J19-          CCATTATTGTTCACAGGAAAAAAATTGATCTTCAAGAAGGATGGACCTTTTTGGAGTGAG
                      ____________________________________________________________
consensus             CCATTATTGTTCACAGGAAAAAAATTGATCTTCAAGAAGGATGGACCTTTTTGGAGTGAG
 
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JMFN034M01+           AAGAGATGGCTCTCACGGCAGATCTCATGGAAGCGCCGGCAGAATTGACGGCGGCTTCAA
JMFF012J19+                                  CTCATGGAAGCGCCGGCAGAATTGACGGCGGCTTCAA
rJMFF012J19-          AAGAGATGGCTCTCACGGCAGATCTCATGGAAGCGCCGGCAGAATTGACGGCGGCTTCAA
                      ____________________________________________________________
consensus             AAGAGATGGCTCTCACGGCAGATCTCATGGAAGCGCCGGCAGAATTGACGGCGGCTTCAA
 
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JMFN034M01+           TATACTTCTTGGCGGCGACGGTGGCCGCCCGCTCCATGGACTTCCCGATGCTCCTCGCCC
JMFF012J19+           TATACTTCTTGGCGGCGACGGTGGCCGCCCGCTCCATGGA-TTCCCGATGCTCCTCGCCC
rJMFF012J19-          TATACTTCTTGGCGGCGACGGTGGCCGCCCGCTCCATGGACTTCCCGATGCTCCTCGCCC
                      ____________________________________________________________
consensus             TATACTTCTTGGCGGCGACGGTGGCCGCCCGCTCCATGGACTTCCCGATGCTCCTCGCCC
 
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JMFN034M01+           TCTCGGCGACGCCGACCAGGCTGTCGTACTCCGCCGCCGCCATCCGATCCATCTCCTCCT
JMFF012J19+           TCTCGGCGACGCCGACCAGGCTGTCGTACTCCGCCGCCGCCATCCGATCCATCTCCTCCT
rJMFF012J19-          TCTCGGCGACGCCGACCAGGCTGTCGTACTCCGCCGCCGCCATCCGATCCATCTCCTCCT
                      ____________________________________________________________
consensus             TCTCGGCGACGCCGACCAGGCTGTCGTACTCCGCCGCCGCCATCCGATCCATCTCCTCCT
 
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JMFN034M01+           CGAAGCGGCGGAACTCCTCCATGGCGCTCTCCATCACGGAGTCCAGATGCTCCTCCGTTT
JMFF012J19+           CGAAGCGGCGGAACTCCTCCATGGCGCTCTCCATCACGGAGTCCAGATGCTCCTCCGTTT
rJMFF012J19-          CGAAGCGGCGGAACTCCTCCATGGCGCTCTCCATCACGGAGTCCAGATGCTCCTCCGTTT
                      ____________________________________________________________
consensus             CGAAGCGGCGGAACTCCTCCATGGCGCTCTCCATCACGGAGTCCAGATGCTCCTCCGTTT
 
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JMFN034M01+           CCTCCATGTACGCCTCCGCTTCCTGGACCTCCTTCTCCTGCTCGAGCTCCATGGCGGCCC
JMFF012J19+           CCTCCATGTACGCCTCCGCTTCCTGGACCTCCTTCTCCTGCTCGAGCTCCATGGCGGCCC
rJMFF012J19-          CCTCCATGTACGCCTCCGCTTCCTGGACCTCCTTCTCCTGCTCGAGCTCCATGGCGGCCC
                      ____________________________________________________________
consensus             CCTCCATGTACGCCTCCGCTTCCTGGACCTCCTTCTCCTGCTCGAGCTCCATGGCGGCCC
 
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JMFN034M01+           AGGCCTTGTAGGCCTCGAGCTCGAAGAGCTTCATCACGTCTTCAATGGCGTATGGATCGA
JMFF012J19+           AGGCCTTGTAGGCCTCGAGCTCGAAGAGCTTCATCACGTCTTCAATGGCGTATGGATCGA
rJMFF012J19-          AGGCCTTGTAGGCCTCGAGCTCGAAGAGCTTCATCACGTCTTCAATGGCGTATGGATCGA
                      ____________________________________________________________
consensus             AGGCCTTGTAGGCCTCGAGCTCGAAGAGCTTCATCACGTCTTCAATGGCGTATGGATCGA
 
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JMFN034M01+           AGCTCTTGTCGTGGAGGGCTTGGTCGGAGAGGATTGTGAACTGAGAAATCAGAGCTTCCA
JMFF012J19+           AGCTCTTGTCGTGGAGGGCTTGGTCGGAGAGGATTGTGAACTGAGAAATCAGAGCTTCCA
rJMFF012J19-          AGCTCTTGTCGTGGAGGGCTTGGTCGGAGAGGATTGTGAACTGAGAAATCAGAGCTTCCA
                      ____________________________________________________________
consensus             AGCTCTTGTCGTGGAGGGCTTGGTCGGAGAGGATTGTGAACTGAGAAATCAGAGCTTCCA
 
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JMFN034M01+           TTTTTGCTCCTCCCTGCGGGTTTTCTTAGCTTGTGCGGTGCAGATTGCGGATGA      
JMFF012J19+           TTTTTGCTCCTCCCTGCGGGTTTTCTTAGCTTGTGCGGTGCAGATTGCGGATGA      
rJMFF012J19-          TTTTTGCTCCTCCCTGCGGGTTTTCTTAGCTTGTGCGGTGCAGATTGCGGATGATTAGTC
                      ____________________________________________________________
consensus             TTTTTGCTCCTCCCTGCGGGTTTTCTTAGCTTGTGCGGTGCAGATTGCGGATGATTAGTC