| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011P22 | Sequence | 556 | 003412 (6) | ref|XP_009758418.1| | 4e-50 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 755 | 008179 (5) | ref|XP_011035631.1| | 3e-24 | PREDICTED: plastidic ATP/ADP-transporter-like [Populus euphratica] |
| JMFF013G07 | Sequence | 614 | 003412 (6) | ref|XP_009758418.1| | 8e-46 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 624 | 008179 (5) | ref|XP_006427151.1| | 2e-62 | hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth |
| JMFF035A24 | Sequence | 477 | 007429 (11) | 637 | 008179 (5) | ref|NP_001274794.1| | 2e-41 | plastidic ATP/ADP-transporter [Solanum tuberosum] sp|O24381.2|TLC1_SOLTU RecName | |||
| JMSF005F18 | Sequence | 440 | 000573 (73) | ref|WP_000709870.1| | 1e-69 | MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea | 392 | 008179 (5) | |||
| JMSF039M19 | Sequence | 669 | 003412 (6) | ref|XP_009758418.1| | 6e-78 | PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris] | 750 | 008179 (5) | ref|XP_006427151.1| | 3e-64 | hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth |
This contig is upended
. : . : . : . : . : . :
rJMFF013G07+ GGTGACCCACTAG
rJMSF039M19+ TGGTGACCCACTAG
____________________________________________________________
consensus TGGTGACCCACTAG
. : . : . : . : . : . :
rJMFF013G07+ CACNTTCTCTTGCAAAGTTTGGGATGACCCNTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
rJMSF039M19+ CACCTTCTCTTGCAAAGTTTGGGATGACCCCTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
____________________________________________________________
consensus CACCTTCTCTTGCAAAGTTTGGGATGACCCCTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
. : . : . : . : . : . :
rJMFF013G07+ TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
rJMSF039M19+ TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
rJMFF035A24+ AAGGAAATGG
____________________________________________________________
consensus TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
. : . : . : . : . : . :
rJMFF013G07+ CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMSF039M19+ CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMFF035A24+ CATTCATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMFF011P22+ CCAAGGTTAANTGAAAGGCAGCAATTGATGTTGTGT
____________________________________________________________
consensus CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
. : . : . : . : . : . :
rJMFF013G07+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMSF039M19+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMFF035A24+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMFF011P22+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
____________________________________________________________
consensus GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
. : . : . : . : . : . :
rJMFF013G07+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
rJMSF039M19+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
rJMFF035A24+ GTTCTCTTGCTAACTGAACTCCCTACCTCGGAGGTGATCTATTGGTGATTGTTGTTGCAT
rJMFF011P22+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
____________________________________________________________
consensus GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
. : . : . : . : . : . :
rJMFF013G07+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMSF039M19+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMFF035A24+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMSF005F18+ CAGTGCGTTGAGGCAAGAAGAAGAGC
rJMFF011P22+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
____________________________________________________________
consensus GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
. : . : . : . : . : . :
rJMFF013G07+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMSF039M19+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMFF035A24+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMSF005F18+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGATCCCCTGTTGTGTCTCAAGATGGAAAT
rJMFF011P22+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
____________________________________________________________
consensus TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
. : . : . : . : . : . :
rJMFF013G07+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMSF039M19+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMFF035A24+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTNTCAG
rJMSF005F18+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMFF011P22+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
____________________________________________________________
consensus GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
. : . : . : . : . : . :
rJMFF013G07+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMSF039M19+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMFF035A24+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMSF005F18+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMFF011P22+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
____________________________________________________________
consensus CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
. : . : . : . : . : . :
rJMFF013G07+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMSF039M19+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMFF035A24+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMSF005F18+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMFF011P22+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
____________________________________________________________
consensus CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
. : . : . : . : . : . :
rJMFF013G07+ AGAAATAAAACA
rJMSF039M19+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMFF035A24+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMSF005F18+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMFF011P22+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
____________________________________________________________
consensus AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
. : . : . : . : . : . :
rJMSF039M19+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMFF035A24+ CTGGCTGGGAATCATAGTTGCAGGATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMSF005F18+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMFF011P22+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
____________________________________________________________
consensus CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
. : . : . : . : . : . :
rJMSF039M19+ TACTGCCTCAA
rJMFF035A24+ TACTGCCTCAACTCAAGATCCAAATGCA
rJMSF005F18+ TACTGC
rJMFF011P22+ TACTGCCTCAACTCAAGATCCAAATGCAGGAGGTTGCGTTTCGATTGTTTGATCAAATTG
____________________________________________________________
consensus TACTGCCTCAACTCAAGATCCAAATGCAGGAGGTTGCGTTTCGATTGTTTGATCAAATTG
. : . : . : . : . : . :
rJMFF011P22+ TGCCGTGTACTCTATCTAGCCCATACGCCTGACCCAAGATAATCTGGGAAGATGGCCAGA
____________________________________________________________
consensus TGCCGTGTACTCTATCTAGCCCATACGCCTGACCCAAGATAATCTGGGAAGATGGCCAGA
. : . : . : . : . : . :
rJMFF011P22+ AAAAGTCAAACAAAGTATAGACACATACATAATATGTCAATTGTAATAGACATATAATTT
____________________________________________________________
consensus AAAAGTCAAACAAAGTATAGACACATACATAATATGTCAATTGTAATAGACATATAATTT