Contig 008178:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P12Sequence589008178 (2)ref|XP_009795642.1|9e-65PREDICTED: phospholipase A1-IIgamma-like [Nicotiana sylvestris]733008178 (2)ref|XP_009777407.1|4e-84PREDICTED: phospholipase A1-IIgamma-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF011P12-                                                          ACCATGCTTGGCT
rJMFF011P12+                                                         ACCATGCTTGGCT
                      ____________________________________________________________
consensus                                                            ACCATGCTTGGCT
 
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JMFF011P12-           CTTTCAGCTGCACTTAAACTTGGAAGCTATCTAGGAATAGTAGTTATGGCGGCCGTGGAA
rJMFF011P12+          CTTTCAGCTGCACTTAAACTTGGAAGCTATCTAGGAATAGTAGTTATGGCGGCCGTGGAA
                      ____________________________________________________________
consensus             CTTTCAGCTGCACTTAAACTTGGAAGCTATCTAGGAATAGTAGTTATGGCGGCCGTGGAA
 
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JMFF011P12-           TATAACCCTCTTCATTATTCATCAATTTCCAAGATCCATCGTCCTGTTGAACCATTCCCA
rJMFF011P12+          TATAACCCTCTTCATTATTCATCAATTTCCAAGATCCATCGTCCTGTTGAACCATTCCCA
                      ____________________________________________________________
consensus             TATAACCCTCTTCATTATTCATCAATTTCCAAGATCCATCGTCCTGTTGAACCATTCCCA
 
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JMFF011P12-           TATTCTTTTCAACCCACCAATTCCCAGGAATACTGTACTCCTCCTTCAAATGATCCTGTG
rJMFF011P12+          TATTCTTTTCAACCCACCAATTCCCAGGAATACTGTACTCCTCCTTCAAATGATCCTGTG
                      ____________________________________________________________
consensus             TATTCTTTTCAACCCACCAATTCCCAGGAATACTGTACTCCTCCTTCAAATGATCCTGTG
 
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JMFF011P12-           ACTTGTTAACCAGCGAGATATCGCGATTCACTACCAGCGAGAACCCATCAAGAACTCCGG
rJMFF011P12+          ACTTGTTAACCAGCGAGATATCGCGATTCACTACCAGCGAGAACCCATCAAGAACTCCGG
                      ____________________________________________________________
consensus             ACTTGTTAACCAGCGAGATATCGCGATTCACTACCAGCGAGAACCCATCAAGAACTCCGG
 
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JMFF011P12-           CGCCTTCTGTTCCGGCAATTCCATGCAAGTAACCTTCTAGGTTATGCCAATTCCATATAT
rJMFF011P12+          CGCCTTCTGTTCCGGCAATTCCATGCAAGTAACCTTCTAGGTTATGCCAATTCCATATAT
                      ____________________________________________________________
consensus             CGCCTTCTGTTCCGGCAATTCCATGCAAGTAACCTTCTAGGTTATGCCAATTCCATATAT
 
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JMFF011P12-           CCGTACTTGGTTTAACGTAACTTGATTTACTAAAGTCAATCGTTAGTTCTACTCCGACAT
rJMFF011P12+          CCGTACTTGGTTTAACGTAACTTGATTTACTAAAGTCAATCGTTAGTTCTACTCCGACAT
                      ____________________________________________________________
consensus             CCGTACTTGGTTTAACGTAACTTGATTTACTAAAGTCAATCGTTAGTTCTACTCCGACAT
 
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JMFF011P12-           CCGTGTAACCGATCAACGGGGTAGCCGGCGGAACTTGGGGGACGATGTCGGGGACGTTGC
rJMFF011P12+          CCGTGTAACCGATCAACGGGGTAGCCGGCGGAACTTGGGGGACGATGTCGGGGACGTTGC
                      ____________________________________________________________
consensus             CCGTGTAACCGATCAACGGGGTAGCCGGCGGAACTTGGGGGACGATGTCGGGGACGTTGC
 
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JMFF011P12-           GGATGCGCAAGAGATGGAGGTTCGGCGTGGCGTCATAAACGTTTTTGAAGTTGTAGTCGC
rJMFF011P12+          GGATGCGCAAGAGATGGAGGTTCGGCGTGGCGTCATAAACGTTTTTGAAGTTGTAGTCGC
                      ____________________________________________________________
consensus             GGATGCGCAAGAGATGGAGGTTCGGCGTGGCGTCATAAACGTTTTTGAAGTTGTAGTCGC
 
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JMFF011P12-           CGGTTCTGGGGCTGACGTACACGAAACCGGTGACCGGAAAAGATTTTCCGTCACTTGTTG
rJMFF011P12+          CGGTTCTGGGGCTGACGTACACGAAACCGGTGACCGGAAAAGATTTTCCGTCACTTGTTG
                      ____________________________________________________________
consensus             CGGTTCTGGGGCTGACGTACACGAAACCGGTGACCGGAAAAGATTTTCCGTCACTTGTTG
 
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JMFF011P12-           TGTTGGCTCCGTTTGTGGCTATGTCGATTGCATTTA                        
rJMFF011P12+          TGTTGGCTCCGTTTGTGGCTATGTCGATTGCATTTAAGGTTGCGAGTGATGCTCCTAGGC
                      ____________________________________________________________
consensus             TGTTGGCTCCGTTTGTGGCTATGTCGATTGCATTTAAGGTTGCGAGTGATGCTCCTAGGC
 
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rJMFF011P12+          TATGTCCGCAAACGGTTATGCTTACTTCCTCGTTCTTGTATAGCTCTACCAACCTTTTCA
                      ____________________________________________________________
consensus             TATGTCCGCAAACGGTTATGCTTACTTCCTCGTTCTTGTATAGCTCTACCAACCTTTTCA
 
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rJMFF011P12+          CTTCCGCCAAAACCTAATTTGTAAAATAAAAATAAAATGTTAAGAGATAATTGACATTAT
                      ____________________________________________________________
consensus             CTTCCGCCAAAACCTAATTTGTAAAATAAAAATAAAATGTTAAGAGATAATTGACATTAT