| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011C07 | Sequence | 385 | 009305 (19) | dbj|BAO57289.1| | 2e-38 | ATP-dependent Lon protease [Ipomoea nil] | 731 | 008175 (4) | dbj|BAO57289.1| | 6e-96 | ATP-dependent Lon protease [Ipomoea nil] |
| JMSF014G01 | Sequence | 259 | 009305 (19) | gb|EYU33045.1| | 4e-11 | hypothetical protein MIMGU_mgv1a001102mg [Erythranthe guttata] | 788 | 008175 (4) | dbj|BAO57289.1| | 1e-120 | ATP-dependent Lon protease [Ipomoea nil] |
| JMSF019P21 | Sequence | 296 | 009305 (19) | dbj|BAO57289.1| | 2e-12 | ATP-dependent Lon protease [Ipomoea nil] | 647 | 008175 (4) | gb|EYU17851.1| | 3e-73 | hypothetical protein MIMGU_mgv1a0010892mg, partial [Erythranthe guttata] |
| JMSF021C01 | Sequence | 688 | 009305 (19) | dbj|BAO57289.1| | 7e-108 | ATP-dependent Lon protease [Ipomoea nil] | 737 | 008175 (4) | dbj|BAO57289.1| | 4e-99 | ATP-dependent Lon protease [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
rJMSF014G01+ AGTCTGGACAGCATTTGGAGGGGAGGTGCAGTTTGTAGAGGCTA
____________________________________________________________
consensus AGTCTGGACAGCATTTGGAGGGGAGGTGCAGTTTGTAGAGGCTA
. : . : . : . : . : . :
rJMSF014G01+ CAGATATGGTGGGAAAAGGTGATCTCCATCTTACAGGTCAACTAGGGGATGTCATTAAAG
rJMSF021C01+ CAACTAGGGGATGTCATTAAAG
rJMFF011C07+ TGTCATTAAAG
____________________________________________________________
consensus CAGATATGGTGGGAAAAGGTGATCTCCATCTTACAGGTCAACTAGGGGATGTCATTAAAG
. : . : . : . : . : . :
rJMSF014G01+ AATCTGCTCAGATTGCACTGACATGGGTACGCGCCAGAACAACTGAACTTAAGTTGTCTA
rJMSF019P21+ TACGCGCCAGAACANNTGAACTTAAGTTGTCTA
rJMSF021C01+ AATCTGCTCAGATTGCACTGACATGGGTACGCGCCAGAACAACTGAACTTAAGTTGTCTA
rJMFF011C07+ AATCTGCTCAGATTGCACTGACATGGGTACGCGCCAGAACAACTGAACTTAAGTTGTCTA
____________________________________________________________
consensus AATCTGCTCAGATTGCACTGACATGGGTACGCGCCAGAACAACTGAACTTAAGTTGTCTA
. : . : . : . : . : . :
rJMSF014G01+ CTGAAGAAAATAATCTCCTAGAGGGCCGTGATATCCATATTCATTTTCCTGCTGGGGCTG
rJMSF019P21+ NTGAAGAAAATAATCTCCTAGAGGGCCGNGATATCCATATTCATTTTCCTGCTGGGGCTG
rJMSF021C01+ CTGAAGAAAATAATCTCCTAGAGGGCCGTGATATCCATATTCATTTTCCTGCTGGGGCTG
rJMFF011C07+ CTGAAGAAAATAATCTCCTAGAGGGCCGTGATATCCATATTCATTTTCCTGCTGGGGCTG
____________________________________________________________
consensus CTGAAGAAAATAATCTCCTAGAGGGCCGTGATATCCATATTCATTTTCCTGCTGGGGCTG
. : . : . : . : . : . :
rJMSF014G01+ TACCCAAGGACGGACCATCCGCTGGAGTAACCCTGGTTACCTCACTGGTTTCATTGTTCA
rJMSF019P21+ TACCCAAGGACGGACCATCCGCTGGAGTAACCCTGGTTACCTCACTGGTTTCATTGTTCA
rJMSF021C01+ TACCCAAGGACGGACCATCCGCTGGAGTAACCCTGGTTACCTCACTGGTTTCATTGTTCA
rJMFF011C07+ TACCCAAGGACGGACCATCCGCTGGAGTAACCCTGGTTACCTCACTGGTTTCATTGTTCA
____________________________________________________________
consensus TACCCAAGGACGGACCATCCGCTGGAGTAACCCTGGTTACCTCACTGGTTTCATTGTTCA
. : . : . : . : . : . :
rJMSF014G01+ GTCAGAGAAAAGTAAGATCTGATACGGCAATGACTGGAGAGATGACTTTGAGGGGACTAG
rJMSF019P21+ GTCAGAGAAAAGTAAGATCTGATACGGCAATGACTGGAGAGATGACTTTGAGGGGACTAG
rJMSF021C01+ GTCAGAGAAAAGTAAGATCTGATACGGCAATGACTGGAGAGATGACTTTGAGGGGACTAG
rJMFF011C07+ GTCAGAGAAAAGTAAGATCTGATACGGCAATGACTGGAGAGATGACTTTGAGGGGACTAG
____________________________________________________________
consensus GTCAGAGAAAAGTAAGATCTGATACGGCAATGACTGGAGAGATGACTTTGAGGGGACTAG
. : . : . : . : . : . :
rJMSF014G01+ TCTTGCCTGTTGGTGGTATCAAGGATAAGGTTTTGGCTGCTCATCGTTATGGTATCAAAA
rJMSF019P21+ TCTTGCCTGTTGGTGGTATCAAGGATAAGGTTTTGGCTGNTCATCGTTATGGTATCAAAA
rJMSF021C01+ TCTTGCCTGTTGGTGGTATCAAGGATAAGGTTTTGGCTGCTCATCGTTATGGTATCAAAA
rJMFF011C07+ TCTTGCCTGTTGGTGGTATCAAGGATAAGGTTTTGGCTGCTCATCGTTATGGTATCAAAA
____________________________________________________________
consensus TCTTGCCTGTTGGTGGTATCAAGGATAAGGTTTTGGCTGCTCATCGTTATGGTATCAAAA
. : . : . : . : . : . :
rJMSF014G01+ GAGTGATTCTACCAGAGAGGAACTTGAAAGATTTGGTTGAAGTACCGGCAACCGTGCTTT
rJMSF019P21+ GAGTGATTNTACCAGAGAGGAACTTGAAAGATTTGGTTGAAGTACCGGCAACCGTGCTTT
rJMSF021C01+ GAGTGATTCTACCAGAGAGGAACTTGAAAGATTTGGTTGAAGTACCGGCAACCGTGCTTT
rJMFF011C07+ GAGTGATTCTACCAGAGAGGAACTTGAAAGATTTGGTTGAAGTACCGGCAACCGTGCTTT
____________________________________________________________
consensus GAGTGATTCTACCAGAGAGGAACTTGAAAGATTTGGTTGAAGTACCGGCAACCGTGCTTT
. : . : . : . : . : . :
rJMSF014G01+ CCAGTCTGGAGATAATAGTTGCTAAGAGAATGGAAGATGTGTTGGAACACGCCTTTGAAG
rJMSF019P21+ CCAGTCTGGAGATAATAGTTGNTAAGAGAATGGAAGATGTGTTGGAACACGCCTTTGAAG
rJMSF021C01+ CCAGTCTGGAGATAATAGTTGCTAAGAGAATGGAAGATGTGTTGGAACACGCCTTTGAAG
rJMFF011C07+ CCAGTCTGGAGATAATAGTTGCTAAGAGAATGGAAGATGTGTTGGAACACGCCTTTGAAG
____________________________________________________________
consensus CCAGTCTGGAGATAATAGTTGCTAAGAGAATGGAAGATGTGTTGGAACACGCCTTTGAAG
. : . : . : . : . : . :
rJMSF014G01+ GTGGTTGCCCTTGGAGGCAACACTCAAAATTATGACAAGTACTAAAAAGAAGATACATAG
rJMSF019P21+ GTGGTTGCCCTTGGAGGCAACACTCAAAATTATGACAAGTACTAAAAAGAAGATACATAG
rJMSF021C01+ GTGGTTGCCCTTGGAGGCAACACTCAAAATTATGACAAGTACTAAAAAGAAGATACATAG
rJMFF011C07+ GTGGTTGCCCTTGGAGGCAACACTCAAAATTATGACAAGTACTAAAAAGAAGATACATAG
____________________________________________________________
consensus GTGGTTGCCCTTGGAGGCAACACTCAAAATTATGACAAGTACTAAAAAGAAGATACATAG
. : . : . : . : . : . :
rJMSF014G01+ TAACTCCAGCGCTCTTCCCCTGCAAATCTGACATAAAACAGCCAACCACTTCCCTAAATG
rJMSF019P21+ TAACTCCAGCGCTCTTCCCCTGCAAATCTGACATAAAACAGCCAACCACTTCCCTAAATG
rJMSF021C01+ TAACTCCAGCGCTCTTCCCCTGCAAATCTGACATAAAACAGCCAACCACTTCCCTAAATG
rJMFF011C07+ TAACTCCAGCGCTCTTCCCCTGCAAATCTGACATAAAACAGCCAACCACTTCCCTAAATG
____________________________________________________________
consensus TAACTCCAGCGCTCTTCCCCTGCAAATCTGACATAAAACAGCCAACCACTTCCCTAAATG
. : . : . : . : . : . :
rJMSF014G01+ CGGTTTGTACAATTCAGTGTGGAAATCTTTTTCTACATATTGGTATTCTTTGCGTCTCAA
rJMSF019P21+ CGGTTTGTACAATTCAGTGTGGAAATCTTTTTCTACATATTGGTATTCTTTGCGTCTCAA
rJMSF021C01+ CGGTTTGTACAATTCAGTGTGGAAATCTTTTTCTACATATTGGTATTCTTTGCGTCTCAA
rJMFF011C07+ CGGTTTGTACAATTCAGTGTGGAAATCTTTTTCTACATATTGGTATTCTTTGCGTCTCAA
____________________________________________________________
consensus CGGTTTGTACAATTCAGTGTGGAAATCTTTTTCTACATATTGGTATTCTTTGCGTCTCAA
. : . : . : . : . : . :
rJMSF014G01+ CCTGTATTCATAATGCTCAGAGCTATTTGCCACTTCCGCTTTTCTATATATACCACACTT
rJMSF019P21+ CCTGTATTCATAATGCTCAGAGCTATTTGCCACTTCCGCTTTTCTATATATNCCACACTT
rJMSF021C01+ CCTGTATTCATAATGCTCAGAGCTATTTGCCACTTCCGCTTTTCTATATATACCACACTT
rJMFF011C07+ CCTATATTCATAATGCTCAGAGCTATTTGCCACTTCCGCTTTTCTATATATACCACACTT
____________________________________________________________
consensus CCTGTATTCATAATGCTCAGAGCTATTTGCCACTTCCGCTTTTCTATATATACCACACTT
. : . : . : . : . : . :
rJMSF014G01+ GATACCATGTATAGCTACT
rJMSF019P21+ GATAC
rJMSF021C01+ GATACCATGTATAGCTACTTGCCACTTCATCTACTGATGGAAAGAGCACTT
rJMFF011C07+ GATACCATGTATAGCTACTTGCCACTTCATCTACTGATGGAAAGAGCACTTTAAATATTT
____________________________________________________________
consensus GATACCATGTATAGCTACTTGCCACTTCATCTACTGATGGAAAGAGCACTTTAAATATTT