Contig 008166:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002D24Sequence639008166 (11)ref|XP_011084738.1|6e-102PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF004P10Sequence179009164 (9)739008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF009P11Sequence588009164 (9)ref|XP_006363983.1|5e-16PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]747008166 (11)ref|XP_011084738.1|3e-115PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF012F23Sequence551009164 (9)740008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF020E22Sequence605009164 (9)ref|XP_006363983.1|9e-15PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]721008166 (11)ref|XP_011084738.1|7e-121PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF033P22Sequence102009164 (9)391008166 (11)ref|XP_011084738.1|1e-48PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMFF044E21Sequence631009164 (9)ref|XP_006363983.1|1e-83PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum]490008166 (11)ref|XP_011084738.1|2e-56PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMSF002E17Sequence415009164 (9)gb|EYU24339.1|3e-05hypothetical protein MIMGU_mgv1a001833mg [Erythranthe guttata]716008166 (11)ref|XP_011084738.1|1e-116PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum]
JMSF023N22Sequence627009164 (9)ref|XP_009628662.1|9e-109PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana tomentosiformis746008166 (11)ref|XP_009804888.1|9e-131PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris]
JMSF042K04Sequence749008166 (11)ref|XP_009804888.1|3e-152PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris]708008166 (11)ref|XP_009804888.1|7e-130PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF042K04-                           AGATGGGTGCTGCTGTTGGACAAGATTGTGAACTGTTGGAGGAG
                      ____________________________________________________________
consensus                             AGATGGGTGCTGCTGTTGGACAAGATTGTGAACTGTTGGAGGAG
 
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rJMSF023N22+                                                    GCAAAGATGACACCAAAC
rJMSF042K04+                                                    GCAAAGATGACACCAAAC
JMSF042K04-           GTATGTGGATGGATTAATGCCATTGCTACTGTCCCTGTTTGGGCAAAGATGACACCAAAC
                      ____________________________________________________________
consensus             GTATGTGGATGGATTAATGCCATTGCTACTGTCCCTGTTTGGGCAAAGATGACACCAAAC
 
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rJMSF023N22+          GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMSF042K04+          GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
JMSF042K04-           GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMSF002E17+                                              AAATCAGGATGTGAGGGGGTGGCT
rJMFF012F23+                                         CTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF004P10+                                         CTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF020E22+                       CAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF009P11+                                           CTTAAATCAGGATGTGAGGGGGTGGCT
                      ____________________________________________________________
consensus             GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
 
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rJMSF023N22+          GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
rJMSF042K04+          GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
JMSF042K04-           GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
rJMSF002E17+          GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF002D24+                                    GGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF012F23+          GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF004P10+          GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF020E22+          GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF009P11+          GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCNT
                      ____________________________________________________________
consensus             GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
 
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rJMSF023N22+          TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
rJMSF042K04+          TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
JMSF042K04-           TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
rJMSF002E17+          TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF002D24+          NGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF012F23+          TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF004P10+          TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF020E22+          TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF009P11+          TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
                      ____________________________________________________________
consensus             TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
 
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rJMSF023N22+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
rJMSF042K04+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
JMSF042K04-           CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
rJMSF002E17+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF002D24+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF012F23+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF004P10+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF033P22+                                                CGAATTCGGGGATCAAGGCTAT
rJMFF020E22+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF009P11+          CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
                      ____________________________________________________________
consensus             CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
 
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rJMSF023N22+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMSF042K04+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
JMSF042K04-           TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMSF002E17+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF002D24+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF012F23+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGGGATGCTGCTGAGTTTATACTTCTT
rJMFF004P10+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF033P22+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGNGATGCTGCTGAGTTTATACTTCTT
rJMFF020E22+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF009P11+          TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
                      ____________________________________________________________
consensus             TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
 
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rJMSF023N22+          GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMSF042K04+          GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMFF044E21+                                       CGTTATGATGCATGGATATGGACTAGTTAAG
JMSF042K04-           GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMSF002E17+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF002D24+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGATAAG
rJMFF012F23+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF004P10+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF033P22+          GGAGCAGATACTGNGCAGG-TTGCACAGGAGTGATGATGCANGGATATGGACTAGTTAAG
rJMFF020E22+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF009P11+          GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
                      ____________________________________________________________
consensus             GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
 
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rJMSF023N22+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMSF042K04+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF044E21+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
JMSF042K04-           AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMSF002E17+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF002D24+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF012F23+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF004P10+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF033P22+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF020E22+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF009P11+          AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
                      ____________________________________________________________
consensus             AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
 
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rJMSF023N22+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMSF042K04+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMFF044E21+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
JMSF042K04-           TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMSF002E17+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF002D24+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF012F23+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF004P10+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF033P22+          TTTAAAGGAGTNTCACTTCCATACTNCACAACTCATATGGATTNGGTGAAAAGACAGCAA
rJMFF020E22+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF009P11+          TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
                      ____________________________________________________________
consensus             TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
 
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rJMSF023N22+          GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMSF042K04+          GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMFF044E21+          GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
JMSF042K04-           GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMSF002E17+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF002D24+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF012F23+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF004P10+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF033P22+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF020E22+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF009P11+          GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
                      ____________________________________________________________
consensus             GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
 
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rJMSF023N22+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMSF042K04+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF044E21+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
JMSF042K04-           GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMSF002E17+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF002D24+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF012F23+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF004P10+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTATCTTTCC
rJMFF033P22+          GGAGATGGTTTTGTTCAAGAANCTGAGAGTATGGTTTCCACCTGATTAATGTGTCTTTC 
rJMFF020E22+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF009P11+          GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
                      ____________________________________________________________
consensus             GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
 
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rJMSF023N22+          CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT                 
rJMSF042K04+          CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT                 
rJMFF044E21+          CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT                 
JMSF042K04-           CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATTAGG              
rJMSF002E17+          ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF002D24+          ACTTCTATTCTAACAAATAAAAGAACCTCNTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF012F23+          ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATT                 
rJMFF004P10+          ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATT                 
rJMFF020E22+          ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF009P11+          ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
                      ____________________________________________________________
consensus             ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
 
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rJMSF002E17+          TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
rJMFF002D24+          TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATNTATGATGAAAATAAAT
rJMFF020E22+          TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
rJMFF009P11+          TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
                      ____________________________________________________________
consensus             TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
 
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rJMSF002E17+          TGTGCT                                                      
rJMFF002D24+          TGTGC                                                       
rJMFF020E22+          TGTGCTAAGATGGT                                              
rJMFF009P11+          TGTGCTAAGATGGTATGTAGTGACATCTCTCATGTGGGAGGTCATTAGGTTGAGAAAGTA
                      ____________________________________________________________
consensus             TGTGCTAAGATGGTATGTAGTGACATCTCTCATGTGGGAGGTCATTAGGTTGAGAAAGTA