Contig 008165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J13Sequence395000044 (4)gb|KJB72092.1|2e-13hypothetical protein B456_011G158300 [Gossypium raimondii]772008165 (3)ref|XP_010326838.1|5e-121PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFF009L06Sequence533000044 (4)ref|XP_009801784.1|2e-42PREDICTED: receptor like protein kinase S.2 [Nicotiana sylvestris]719008165 (3)ref|XP_010326838.1|1e-106PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMSF037C22Sequence460000044 (4)emb|CDO99461.1|5e-29unnamed protein product [Coffea canephora]633008165 (3)ref|XP_010326838.1|2e-93PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF005J13+ AGGTACAACATAATCAAGTCACTGGCTTCCGCGATTCGCTATCTCCACGAGGAAT
                      ____________________________________________________________
consensus AGGTACAACATAATCAAGTCACTGGCTTCCGCGATTCGCTATCTCCACGAGGAAT
 
. : . : . : . : . : . :
rJMSF037C22+ CGACA
rJMFF005J13+ GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
rJMFF009L06+ GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
                      ____________________________________________________________
consensus GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
 
. : . : . : . : . : . :
rJMSF037C22+ TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
rJMFF005J13+ TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
rJMFF009L06+ TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
                      ____________________________________________________________
consensus TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
 
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rJMSF037C22+ ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
rJMFF005J13+ ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
rJMFF009L06+ ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
                      ____________________________________________________________
consensus ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
 
. : . : . : . : . : . :
rJMSF037C22+ AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
rJMFF005J13+ AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
rJMFF009L06+ AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
                      ____________________________________________________________
consensus AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
 
. : . : . : . : . : . :
rJMSF037C22+ TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
rJMFF005J13+ TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
rJMFF009L06+ TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
                      ____________________________________________________________
consensus TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
 
. : . : . : . : . : . :
rJMSF037C22+ TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
rJMFF005J13+ TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
rJMFF009L06+ TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
                      ____________________________________________________________
consensus TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
 
. : . : . : . : . : . :
rJMSF037C22+ GGCTGGATGGCAAGATTAACAAACGNGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
rJMFF005J13+ GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
rJMFF009L06+ GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
                      ____________________________________________________________
consensus GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
 
. : . : . : . : . : . :
rJMSF037C22+ GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
rJMFF005J13+ GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
rJMFF009L06+ GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
                      ____________________________________________________________
consensus GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
 
. : . : . : . : . : . :
rJMSF037C22+ GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
rJMFF005J13+ GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
rJMFF009L06+ GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
                      ____________________________________________________________
consensus GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
 
. : . : . : . : . : . :
rJMSF037C22+ AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
rJMFF005J13+ AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
rJMFF009L06+ AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
                      ____________________________________________________________
consensus AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
 
. : . : . : . : . : . :
rJMSF037C22+ CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAACTTAATGATGTTT
rJMFF005J13+ CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
rJMFF009L06+ CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
                      ____________________________________________________________
consensus CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
 
. : . : . : . : . : . :
rJMSF037C22+ TTNGATGTGTTCCCCTTGNAAAGAATGA
rJMFF005J13+ TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATA
rJMFF009L06+ TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATATC
                      ____________________________________________________________
consensus TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATATC