Contig 008165:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J13Sequence395000044 (4)gb|KJB72092.1|2e-13hypothetical protein B456_011G158300 [Gossypium raimondii]772008165 (3)ref|XP_010326838.1|5e-121PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMFF009L06Sequence533000044 (4)ref|XP_009801784.1|2e-42PREDICTED: receptor like protein kinase S.2 [Nicotiana sylvestris]719008165 (3)ref|XP_010326838.1|1e-106PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
JMSF037C22Sequence460000044 (4)emb|CDO99461.1|5e-29unnamed protein product [Coffea canephora]633008165 (3)ref|XP_010326838.1|2e-93PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF005J13+               AGGTACAACATAATCAAGTCACTGGCTTCCGCGATTCGCTATCTCCACGAGGAAT
                      ____________________________________________________________
consensus                  AGGTACAACATAATCAAGTCACTGGCTTCCGCGATTCGCTATCTCCACGAGGAAT
 
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rJMSF037C22+                                                                 CGACA
rJMFF005J13+          GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
rJMFF009L06+          GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
                      ____________________________________________________________
consensus             GGGACGAGCAGGTCATCCACAGGTGCATCACGTCCTCCGCTGTCATTCTCGACCCCGACA
 
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rJMSF037C22+          TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
rJMFF005J13+          TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
rJMFF009L06+          TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
                      ____________________________________________________________
consensus             TGAACCCGAGGCTCGGTTCCTTCGCCCTGGCTGAATTCTTAGCCAGGAACGAGCACGGTC
 
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rJMSF037C22+          ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
rJMFF005J13+          ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
rJMFF009L06+          ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
                      ____________________________________________________________
consensus             ATCACGTCGTCGTGGATAAGAACAAGTCGGTGAGAGGGATTTTTGGCTACATGTCCCCCG
 
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rJMSF037C22+          AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
rJMFF005J13+          AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
rJMFF009L06+          AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
                      ____________________________________________________________
consensus             AGTATATGGAATCCGGGGAAGCAACCACAATGGCTGATGTTTACAGCTTCGGGGTAGTGC
 
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rJMSF037C22+          TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
rJMFF005J13+          TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
rJMFF009L06+          TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
                      ____________________________________________________________
consensus             TGCTGGAGGTCGTCAGTGGACAGATGGCAGTCGATTTTCGCAGGCCCGAAGTCCTCCTGG
 
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rJMSF037C22+          TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
rJMFF005J13+          TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
rJMFF009L06+          TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
                      ____________________________________________________________
consensus             TTCACAGACTACACGAATTCGAACTGAGGAAACGACCATACGAGGAGCTAGCAGACCCGA
 
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rJMSF037C22+          GGCTGGATGGCAAGATTAACAAACGNGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
rJMFF005J13+          GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
rJMFF009L06+          GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
                      ____________________________________________________________
consensus             GGCTGGATGGCAAGATTAACAAACGAGAGGTGCTCCGAATGGTCAGATTAGGAATGGCGT
 
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rJMSF037C22+          GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
rJMFF005J13+          GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
rJMFF009L06+          GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
                      ____________________________________________________________
consensus             GCACTCGGTCTGATCCAGCACAGCGCCCGAGCATGAGACAGATAGTGAGCATACTAGACG
 
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rJMSF037C22+          GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
rJMFF005J13+          GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
rJMFF009L06+          GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
                      ____________________________________________________________
consensus             GGCGGGATCAATGGTTTTTGGAGAATGGACTAAGGAAGGAGAAAAGGGAAGATTGGAGGA
 
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rJMSF037C22+          AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
rJMFF005J13+          AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
rJMFF009L06+          AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
                      ____________________________________________________________
consensus             AGAGAAATGCTTCTTCTCTGTCACATGTTAGAAGAATTCAAGCTCTTGGCATACATTGAT
 
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rJMSF037C22+          CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAACTTAATGATGTTT
rJMFF005J13+          CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
rJMFF009L06+          CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
                      ____________________________________________________________
consensus             CCTAAAGTCCTAAACTAAAAATCACATCTTTCTTTTGTTTGATTAAA-TTAATGATGTTT
 
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rJMSF037C22+          TTNGATGTGTTCCCCTTGNAAAGAATGA                                
rJMFF005J13+          TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATA  
rJMFF009L06+          TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATATC
                      ____________________________________________________________
consensus             TTAGATGTGTTCCCCTTGTAAAGAATGACAGGCAAAACACCTTTTATATATATACATATC