| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009C01 | Sequence | 612 | 007305 (4) | ref|XP_011096601.1| | 1e-35 | PREDICTED: F-box protein At4g18380-like [Sesamum indicum] | 688 | 008163 (4) | gb|EYU33385.1| | 8e-16 | hypothetical protein MIMGU_mgv1a008110mg [Erythranthe guttata] |
| JMFF010D17 | Sequence | 271 | 007305 (4) | ref|XP_011085237.1| | 8e-06 | PREDICTED: F-box protein At4g18380-like [Sesamum indicum] | 691 | 008163 (4) | ref|XP_006355407.1| | 2e-42 | PREDICTED: F-box protein At5g46170-like [Solanum tuberosum] |
| JMFF022H09 | Sequence | 452 | 007305 (4) | gb|EYU33385.1| | 3e-22 | hypothetical protein MIMGU_mgv1a008110mg [Erythranthe guttata] | 699 | 008163 (4) | ref|XP_006355407.1| | 2e-43 | PREDICTED: F-box protein At5g46170-like [Solanum tuberosum] |
| JMSF051B08 | Sequence | 693 | 007305 (4) | ref|XP_011096601.1| | 5e-41 | PREDICTED: F-box protein At4g18380-like [Sesamum indicum] | 797 | 008163 (4) | ref|XP_006355407.1| | 4e-59 | PREDICTED: F-box protein At5g46170-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF051B08+ GCAGAGCATAAACTCGG
____________________________________________________________
consensus GCAGAGCATAAACTCGG
. : . : . : . : . : . :
rJMSF051B08+ ATAGTTNGGTTTGACCGACACGGATGGCCAGGGAGTTCTGTGTATGAACAGGGAGCAGCC
____________________________________________________________
consensus ATAGTTNGGTTTGACCGACACGGATGGCCAGGGAGTTCTGTGTATGAACAGGGAGCAGCC
. : . : . : . : . : . :
rJMSF051B08+ TGAGGAGCTGAGAGTGAAGCCACTCTCCGCATCCTCGGCCTCCAAGCGAACTTTGGTGCC
rJMFF010D17+ GCCTCCAAGCGAACTTTGGTGCC
rJMFF022H09+ GCCTCCAAGCGAACTTTGGTGCC
____________________________________________________________
consensus TGAGGAGCTGAGAGTGAAGCCACTCTCCGCATCCTCGGCCTCCAAGCGAACTTTGGTGCC
. : . : . : . : . : . :
rJMSF051B08+ GGCTCTGAATATGCGCCTCTGGTACGCTCCACATTTGGAGTTACCAGATGGAACAGTGCT
rJMFF010D17+ GGCTCTGAATATGCGCCTCTGGTACGCTCCACATTTGGAGTTACCAGATGGAACAGTGCT
rJMFF022H09+ GGCTCTGAATATGCGCCTCTGGTACGCTCCACATTTGGAGTTACCAGATGGAACAGTGCT
____________________________________________________________
consensus GGCTCTGAATATGCGCCTCTGGTACGCTCCACATTTGGAGTTACCAGATGGAACAGTGCT
. : . : . : . : . : . :
rJMSF051B08+ TAAAGGTGCGACCTTGGTGGCTATTAGGCCCAGCGAGCAGCACAAGAAAGATGTGGTTGG
rJMFF010D17+ TAAAGGTGCGACCTTGGTGGCTATTAGGCCCAGCGAGCAGCACAAGAAAGATGTGGTTGG
rJMFF022H09+ TAAAGGTGCGACCTTGGTGGCTATTAGGCCCAGCGAGCAGCACAAGAAAGATGTGGTTGG
rJMFF009C01+ GCGAGCAGCACAAGAAAGATGTGGTTGG
____________________________________________________________
consensus TAAAGGTGCGACCTTGGTGGCTATTAGGCCCAGCGAGCAGCACAAGAAAGATGTGGTTGG
. : . : . : . : . : . :
rJMSF051B08+ GTCAGATGGGAATTGGGTAGCTTCGGCTTTCGATGAACCCTATGGGGCAGCTGCAAGGAT
rJMFF010D17+ GTCAGATGGGAATTGGGTAGCTTCGGCTTTCGATGAACCCTATGGGGCAGCTGCAAGGAT
rJMFF022H09+ GTCAGATGGGAATTGGGTAGCTTCGGCTTTCGATGAACCCTATGGGGCAGCTGCAAGGAT
rJMFF009C01+ GTCAGATGGGAATTGGGTAGCTTCGGCTTTCGATGAACCCTATGGGGCAGCTGCAAGGAT
____________________________________________________________
consensus GTCAGATGGGAATTGGGTAGCTTCGGCTTTCGATGAACCCTATGGGGCAGCTGCAAGGAT
. : . : . : . : . : . :
rJMSF051B08+ GCTGGTGAAGAGGAGAACCTACTGTCTTGAAATGAACTCGTTCTGAAAGCGAATCAAGAA
rJMFF010D17+ GCTGGTGAAGAGGAGAACCTACTGTCTTGGAATGAACTCGTTCTGAAAGCGAATCAAGAA
rJMFF022H09+ GCTGGTGAAGAGGAGAACCTACTGTCTTGAAATGAACTCGTTCTGAAAGCGAATCAAGAA
rJMFF009C01+ GCTGGTGAAGAGGAGAACCTACTGTCTTGAAATGAACTCGTTCTGAAAGCGAATCAAGAA
____________________________________________________________
consensus GCTGGTGAAGAGGAGAACCTACTGTCTTGAAATGAACTCGTTCTGAAAGCGAATCAAGAA
. : . : . : . : . : . :
rJMSF051B08+ TTCGTTAGATGGATCTCTAAGCTG----AGGTTGCTGCTTTTGATGAAAGATGGATTCAC
rJMFF010D17+ TTCGTTAGATGGATCTCTAAGCTGAGGAAGGTTGCTGCTTTTGATGAAAGATGGATTCAC
rJMFF022H09+ TTCGTTAGATGGATCTCTAAGCTGAGGAAGGTTGCTGCTTTTGATGAAAGATGGATTCAC
rJMFF009C01+ TTCGTTAGATGGATCTCTAAGCTGAGGAAGGTTGCTGCTTTTGATGAAAGATGGATTCAC
____________________________________________________________
consensus TTCGTTAGATGGATCTCTAAGCTGAGGAAGGTTGCTGCTTTTGATGAAAGATGGATTCAC
. : . : . : . : . : . :
rJMSF051B08+ GTGTCATGGAAGGATGAGAAACAGTACAATTTTGTCTTGAGCCGCAATTGAGTTAATTGA
rJMFF010D17+ GTGTCATGGAAGGATGAGAAACAGTACAATTTTGTCTTGAGCCGCAATTGAGTTAATTGA
rJMFF022H09+ GTGTCATGGAAGGATGAGAAACAGTACAATTTTGTCTTGAGCCGCAATTGAGTTAATTGA
rJMFF009C01+ GTGTCATGGAAGGATGAGAAACAGTACAATTTTGTCTTGAGCCGCAATTGAGTTAATTGA
____________________________________________________________
consensus GTGTCATGGAAGGATGAGAAACAGTACAATTTTGTCTTGAGCCGCAATTGAGTTAATTGA
. : . : . : . : . : . :
rJMSF051B08+ GCCTCTTTACATATGAATCGTAAATTCGTAATGGAGCAATGCATGCTTCGGGAGATGAAA
rJMFF010D17+ GCCTCTTTACATATGAATCGTAAATTCGTAATGGTGCAATGCATGCTTCGGGAGATGAAA
rJMFF022H09+ GCCTCTTTACATATGAATCGTAAATTCGTAATGGAGCAATGCATGCTTCGGGAGATGAAA
rJMFF009C01+ GCCTCTTTACATATGAATCGTAAATTCGTAATGGAGCAATGCATGCTTCGGGAGATGAAA
____________________________________________________________
consensus GCCTCTTTACATATGAATCGTAAATTCGTAATGGAGCAATGCATGCTTCGGGAGATGAAA
. : . : . : . : . : . :
rJMSF051B08+ TACCAATTGTCAACTGATCAATAGCTGTAAATGTGTTGTTGTGCACTTAAACAAACGGAC
rJMFF010D17+ TACCAATTGTCAACTGATCAATAGCTGTAAATGTGTTGTTGTGCACTTAAACAAACGGAC
rJMFF022H09+ TACCAATTGTCAACTGATCAATAGCTGTAAATGTGTTGTTGTGCACTTAAACAAACGGAC
rJMFF009C01+ TACCAATTGTCAACTGATCAATAGCTGTAAATGTGTTGTTGTGCACTTAAACAAACGGAC
____________________________________________________________
consensus TACCAATTGTCAACTGATCAATAGCTGTAAATGTGTTGTTGTGCACTTAAACAAACGGAC
. : . : . : . : . : . :
rJMSF051B08+ AACAGGCATATGCTTTATGGATGCTGAGAATGCTTAATGATTTATGTTGTAAGAGCTTTG
rJMFF010D17+ AACAGGCATATGCTTTATGGATGCTGAGAATGCTTAATGATTTATGTTGTAAGAGCTTTG
rJMFF022H09+ AACAGGCATATGCTTTATGGATGCTGAGAATGCTTAATGATTTATGTTGTAAGAGCTTTG
rJMFF009C01+ AACAGGCATATGCTTTATGGATGCTGAGAATGCTTAATGATTTATGTTGTAAGAGCTTTG
____________________________________________________________
consensus AACAGGCATATGCTTTATGGATGCTGAGAATGCTTAATGATTTATGTTGTAAGAGCTTTG
. : . : . : . : . : . :
rJMSF051B08+ TGCCTTTGACATCGTCGTGGTCTACTTAGTTTCCTCTGTGAATATTGTAGGTTATGCTAT
rJMFF010D17+ TGCCTTTGACATCGTCGTGGTCTACTTAGTTTCCTCTGTGAATATTGTAGGTTATGCTAT
rJMFF022H09+ TGCCTTTGACATCGTCGTGGTCTACTTAGTTTCCTCTGTGAATATTGTAGGTTATGCTAT
rJMFF009C01+ TGCCTTTGACATCGTCGTGGTCTACTTAGTTTCCTCTGTGAATATTGTAGGTTATGCTAT
____________________________________________________________
consensus TGCCTTTGACATCGTCGTGGTCTACTTAGTTTCCTCTGTGAATATTGTAGGTTATGCTAT
. : . : . : . : . : . :
rJMSF051B08+ GCTTATGTGATGTACTTTCAAGGTTAATCGAGCAATGAATTGTGTATTTCGCTCGTATCT
rJMFF010D17+ GCTTATGTGATGTACTTTCAAGGTTAATCGAGCAATGAATTGTGTATTTCGCTCGTATCT
rJMFF022H09+ GCTTATGTGATGTACTTTCAAGGTTAATCGAGCAATGAATTGTGTATTTCGCTCGTATCT
rJMFF009C01+ GCTTATGTGATGTACTTTCAAGGTTAATCGAGCAATGAATTGTGTATTTCGCTCGTATCT
____________________________________________________________
consensus GCTTATGTGATGTACTTTCAAGGTTAATCGAGCAATGAATTGTGTATTTCGCTCGTATCT
. : . : . : . : . : . :
rJMSF051B08+ GA
rJMFF010D17+ GAAT
rJMFF022H09+ GAGTTATTAATGTGTT
rJMFF009C01+ GAATTATTAATGTGTTACTTTTCTGAACAAATTTGCCTGGTTCTTCAACCTCCTCGTGTC
____________________________________________________________
consensus GAATTATTAATGTGTTACTTTTCTGAACAAATTTGCCTGGTTCTTCAACCTCCTCGTGTC
. : . : . : . : . : . :
rJMFF009C01+ TTTAACATACTGTGCTGCAACTTGTGCTTATGGTCTGTCTTGGTTTTTGGGGCACGATTC
____________________________________________________________
consensus TTTAACATACTGTGCTGCAACTTGTGCTTATGGTCTGTCTTGGTTTTTGGGGCACGATTC