Contig 008162:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF026C01-                                   GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
JMSF027C01-                                   GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
                      ____________________________________________________________
consensus                                     GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
 
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JMSF026C01-           ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
JMSF027C01-           ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
                      ____________________________________________________________
consensus             ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
 
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JMSF026C01-           AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
JMSF027C01-           AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
                      ____________________________________________________________
consensus             AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
 
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JMSF026C01-           TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
JMSF027C01-           TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
                      ____________________________________________________________
consensus             TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
 
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JMSF026C01-           TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
JMSF027C01-           TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
                      ____________________________________________________________
consensus             TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
 
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JMSF026C01-           CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
JMSF027C01-           CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
                      ____________________________________________________________
consensus             CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
 
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JMSF026C01-           GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
JMSF027C01-           GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
JMFF008M19-           GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
                      ____________________________________________________________
consensus             GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
 
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JMSF026C01-           TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
JMSF027C01-           TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
JMFF008M19-           TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
                      ____________________________________________________________
consensus             TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
 
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JMSF026C01-           CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
JMSF027C01-           CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
JMFF008M19-           CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
                      ____________________________________________________________
consensus             CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
 
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JMSF026C01-           CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
JMSF027C01-           CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
JMFF008M19-           CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
                      ____________________________________________________________
consensus             CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
 
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JMSF026C01-           TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
JMSF027C01-           TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
JMFF008M19-           TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
                      ____________________________________________________________
consensus             TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
 
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JMSF026C01-           TCCCACTGATCTTGTGAAAGTTCGACTTCAG                             
JMSF027C01-           TCCCACTGATCTTGTGAAAGTNCGACTTCAGGCTGAGAGTAAAGCACCTGTT        
JMFF008M19-           TCCCACTGATCTTGTGAAAGTTCGACTTCAGGCTGAGAGTAAAGCACCTGTTGGTGCACC
rJMSF027C01+                                          CTGAGAGTAAAGCACCTGNTGGTGCACC
rJMSF026C01+                                          CTGAGAGTAAAGCACCTGTTGGTGCACC
rJMFF008M19+                                          CTGAGAGTAAAGCACCTGTTGGTGCACN
                      ____________________________________________________________
consensus             TCCCACTGATCTTGTGAAAGTTCGACTTCAGGCTGAGAGTAAAGCACCTGTTGGTGCACC
 
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JMFF008M19-           TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMSF027C01+          TAGGCGTTATATNGGAGCTATGNATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMSF026C01+          TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMFF008M19+          TAGGCGTTATATNGGAGCTATGGATGCATATTATACAATAGTGAANCAGGAAGGATTGAC
                      ____________________________________________________________
consensus             TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
 
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JMFF008M19-           AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMSF027C01+          AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMSF026C01+          AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMFF008M19+          AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
                      ____________________________________________________________
consensus             AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
 
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JMFF008M19-           GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMSF027C01+          GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMSF026C01+          GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMFF008M19+          GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
                      ____________________________________________________________
consensus             GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
 
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JMFF008M19-           TGCTTTAACCCATCTTCTAGCTGG                                    
rJMSF027C01+          TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTNGCAGTTTGCATTGGCTC
rJMSF026C01+          TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
rJMFF008M19+          TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
                      ____________________________________________________________
consensus             TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
 
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rJMSF027C01+          TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
rJMSF026C01+          TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
rJMFF008M19+          TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
                      ____________________________________________________________
consensus             TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
 
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rJMSF027C01+          TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
rJMSF026C01+          TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
rJMFF008M19+          TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
                      ____________________________________________________________
consensus             TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
 
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rJMSF027C01+          CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
rJMSF026C01+          CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
rJMFF008M19+          CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
                      ____________________________________________________________
consensus             CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
 
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rJMSF027C01+          GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
rJMSF026C01+          GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
rJMFF008M19+          GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
                      ____________________________________________________________
consensus             GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
 
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rJMSF027C01+          CNGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
rJMSF026C01+          CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
rJMFF008M19+          CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
                      ____________________________________________________________
consensus             CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
 
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rJMSF027C01+          GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
rJMSF026C01+          GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
rJMFF008M19+          GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
                      ____________________________________________________________
consensus             GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
 
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rJMSF027C01+          GCCTGATGCTTTTTCTCTTC                                        
rJMSF026C01+          GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
rJMFF008M19+          GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
                      ____________________________________________________________
consensus             GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
 
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rJMSF026C01+          GAACAATTACTGTAATATACGTATGAC                                 
rJMFF008M19+          GAACAATTACTGTAATATACGTATGACAGAAATTTATGATTCTAGTACTCAGGAAGAGAA
                      ____________________________________________________________
consensus             GAACAATTACTGTAATATACGTATGACAGAAATTTATGATTCTAGTACTCAGGAAGAGAA