Contig 008162:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008M19Sequence564008162 (6)emb|CDP09139.1|4e-70unnamed protein product [Coffea canephora]749008162 (6)emb|CDP09139.1|5e-80unnamed protein product [Coffea canephora]
JMSF026C01Sequence667008162 (6)gb|AAU11462.1|6e-31mitochondrial uncoupling protein 1 [Saccharum officinarum]716008162 (6)emb|CDP09139.1|4e-82unnamed protein product [Coffea canephora]
JMSF027C01Sequence688008162 (6)emb|CDP09139.1|3e-34unnamed protein product [Coffea canephora]648008162 (6)emb|CDP09139.1|5e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026C01- GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
JMSF027C01- GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
                      ____________________________________________________________
consensus GGGAGCGGAGCAGCAGACGCCATCTGAAACTACCAC
 
. : . : . : . : . : . :
JMSF026C01- ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
JMSF027C01- ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
                      ____________________________________________________________
consensus ACCGGCGATTGGCGAAGGCAGATCCAATAGGGGAGAATCTTTCAACCGATCACAGTGGAG
 
. : . : . : . : . : . :
JMSF026C01- AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
JMSF027C01- AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
                      ____________________________________________________________
consensus AGGGATCAAACGAAGCCTATCGTCTACGCCTTTACTTGTTAATTACTCATCATAACATAA
 
. : . : . : . : . : . :
JMSF026C01- TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
JMSF027C01- TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
                      ____________________________________________________________
consensus TTACACTCTTAATCGCTCTTCATGCACATCTAAACACTCTCCGCGCAAGCCGACCGCCGC
 
. : . : . : . : . : . :
JMSF026C01- TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
JMSF027C01- TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
                      ____________________________________________________________
consensus TGGATTTTGCTTTCCAATAATGGCGTACGAGATCTCTTTCGCCGGAATATTCGCTTGCAG
 
. : . : . : . : . : . :
JMSF026C01- CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
JMSF027C01- CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
                      ____________________________________________________________
consensus CGCCTTCGCTGCCTGCTTCGCCGAGTTCTGTACTCTACCTTTTGACACAGCAAAAGTTAG
 
. : . : . : . : . : . :
JMSF026C01- GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
JMSF027C01- GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
JMFF008M19- GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
                      ____________________________________________________________
consensus GTTACAGCTGCAAAAGGGGGCGGCGTCAGGCCATTCAGGGGACGGAGGAGGCGGTGGAGC
 
. : . : . : . : . : . :
JMSF026C01- TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
JMSF027C01- TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
JMFF008M19- TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
                      ____________________________________________________________
consensus TAAGTATAAGGGCTTGTTGGGTACTATGGTGACGATTGCTAAGGAGGAAGGAATTCTTGC
 
. : . : . : . : . : . :
JMSF026C01- CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
JMSF027C01- CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
JMFF008M19- CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
                      ____________________________________________________________
consensus CCTTTGGAAGGGCGTTATACCTGGCTTACATCGACAGTTTCTCTACGGGGGCCTAAGAAT
 
. : . : . : . : . : . :
JMSF026C01- CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
JMSF027C01- CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
JMFF008M19- CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
                      ____________________________________________________________
consensus CGGGTTATATGAGCCTGTTAAGGCCTTCATCATAGGCAGTGATCATGTTGGAGAAGTTTC
 
. : . : . : . : . : . :
JMSF026C01- TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
JMSF027C01- TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
JMFF008M19- TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
                      ____________________________________________________________
consensus TTTGTTCAGTAAAATACTAGCTGCTCTATTAACTGGTGCTATTGCAATCGCTGTGGCTAA
 
. : . : . : . : . : . :
JMSF026C01- TCCCACTGATCTTGTGAAAGTTCGACTTCAG
JMSF027C01- TCCCACTGATCTTGTGAAAGTNCGACTTCAGGCTGAGAGTAAAGCACCTGTT
JMFF008M19- TCCCACTGATCTTGTGAAAGTTCGACTTCAGGCTGAGAGTAAAGCACCTGTTGGTGCACC
rJMSF027C01+ CTGAGAGTAAAGCACCTGNTGGTGCACC
rJMSF026C01+ CTGAGAGTAAAGCACCTGTTGGTGCACC
rJMFF008M19+ CTGAGAGTAAAGCACCTGTTGGTGCACN
                      ____________________________________________________________
consensus TCCCACTGATCTTGTGAAAGTTCGACTTCAGGCTGAGAGTAAAGCACCTGTTGGTGCACC
 
. : . : . : . : . : . :
JMFF008M19- TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMSF027C01+ TAGGCGTTATATNGGAGCTATGNATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMSF026C01+ TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
rJMFF008M19+ TAGGCGTTATATNGGAGCTATGGATGCATATTATACAATAGTGAANCAGGAAGGATTGAC
                      ____________________________________________________________
consensus TAGGCGTTATATTGGAGCTATGGATGCATATTATACAATAGTGAAACAGGAAGGATTGAC
 
. : . : . : . : . : . :
JMFF008M19- AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMSF027C01+ AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMSF026C01+ AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
rJMFF008M19+ AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
                      ____________________________________________________________
consensus AGCTCTATGGACAGGGCTTGGGCCAAATATTGCACGAAATGCTATTATAAATGCTGCTGA
 
. : . : . : . : . : . :
JMFF008M19- GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMSF027C01+ GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMSF026C01+ GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
rJMFF008M19+ GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
                      ____________________________________________________________
consensus GCTAGCTAGCTATGATCATGTTAAAGAGACAATCTTAAAAATTCCAGGGTTCACTGATAG
 
. : . : . : . : . : . :
JMFF008M19- TGCTTTAACCCATCTTCTAGCTGG
rJMSF027C01+ TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTNGCAGTTTGCATTGGCTC
rJMSF026C01+ TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
rJMFF008M19+ TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
                      ____________________________________________________________
consensus TGCTTTAACCCATCTTCTAGCTGGTGTAGGTGCGGGATTTTTTGCAGTTTGCATTGGCTC
 
. : . : . : . : . : . :
rJMSF027C01+ TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
rJMSF026C01+ TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
rJMFF008M19+ TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
                      ____________________________________________________________
consensus TCCTGTTGATGTGGTGAAATCTAGAATGATGGGAGATTCATTTTACAAAAGCACTTTGGA
 
. : . : . : . : . : . :
rJMSF027C01+ TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
rJMSF026C01+ TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
rJMFF008M19+ TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
                      ____________________________________________________________
consensus TTGCTTTTTCAAAACTTTAAAGAATGAGGGTCCTTTTGCCTTCTATAAGGGCTTCCTTCC
 
. : . : . : . : . : . :
rJMSF027C01+ CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
rJMSF026C01+ CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
rJMFF008M19+ CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
                      ____________________________________________________________
consensus CAATTTCACTCGACTAGGATTATGGAATGTTATCATGTTTTTGACTTTTGAGCGTGTCAA
 
. : . : . : . : . : . :
rJMSF027C01+ GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
rJMSF026C01+ GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
rJMFF008M19+ GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
                      ____________________________________________________________
consensus GAGATTCTTCTTCATATGAGAAATTAAACGAAGCTAAGGATTTTTTTGAATAGCCTCAAT
 
. : . : . : . : . : . :
rJMSF027C01+ CNGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
rJMSF026C01+ CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
rJMFF008M19+ CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
                      ____________________________________________________________
consensus CTGGAAATTCTTTTTGTGAAATATTCGGTTGCTCTCCTTGCAAATAGTCATTCCACTTGG
 
. : . : . : . : . : . :
rJMSF027C01+ GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
rJMSF026C01+ GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
rJMFF008M19+ GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
                      ____________________________________________________________
consensus GTATGCTGAGGGGATTTATTTATTGAAGGAGCATCCTGGAATGCCTTTTTGGTAATATAG
 
. : . : . : . : . : . :
rJMSF027C01+ GCCTGATGCTTTTTCTCTTC
rJMSF026C01+ GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
rJMFF008M19+ GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
                      ____________________________________________________________
consensus GCCTGATGCTTTTTCTCTTCCAGTTCATTAGTTGATGAATCTTGAATAAACAGTAAAGAT
 
. : . : . : . : . : . :
rJMSF026C01+ GAACAATTACTGTAATATACGTATGAC
rJMFF008M19+ GAACAATTACTGTAATATACGTATGACAGAAATTTATGATTCTAGTACTCAGGAAGAGAA
                      ____________________________________________________________
consensus GAACAATTACTGTAATATACGTATGACAGAAATTTATGATTCTAGTACTCAGGAAGAGAA